BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0042.p         (61 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum             107   9e-24
CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides               74   6e-14
PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa               74   9e-14
XF0379 [C] COG1773 Rubredoxin Xfa Xylella fastidiosa 9a5c              72   4e-13
Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv    71   5e-13

>RSc0667 [C] COG1773 Rubredoxin Rso Ralstonia solanacearum
          Length = 60

 Score =  107 bits (266), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 53/59 (89%)

Query: 3  DSKTEYKTWMCLICGWVYDEEAGLPDEDIAPGTRWEDVPINWTCPECGARKEDFEMVAL 61
          + + EYKTWMCLICGW+YDEE G PD+ IAPGT+WEDVPINWTCPECGARKEDFEMV +
Sbjct: 2  EQQIEYKTWMCLICGWIYDEEQGAPDDGIAPGTKWEDVPINWTCPECGARKEDFEMVQI 60


>CC2495 [C] COG1773 Rubredoxin Ccr Caulobacter vibrioides
          Length = 59

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 38/58 (65%)

Query: 4  SKTEYKTWMCLICGWVYDEEAGLPDEDIAPGTRWEDVPINWTCPECGARKEDFEMVAL 61
          S   +K W C  CG++YDEE G P E +APGTRW D+P  W CP CG  K DF+M+ L
Sbjct: 2  SAEPFKVWQCRTCGYIYDEEQGDPGEGLAPGTRWADIPAGWVCPLCGTPKSDFDMIEL 59


>PA5350 [C] COG1773 Rubredoxin Pae Pseudomonas aeruginosa
          Length = 55

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 40/53 (75%)

Query: 9  KTWMCLICGWVYDEEAGLPDEDIAPGTRWEDVPINWTCPECGARKEDFEMVAL 61
          + W C++CG++YDE  GLP+E I  GTRWED+P +W CP+CG  K DFEM+ +
Sbjct: 2  RKWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVGKIDFEMIEI 54


>XF0379 [C] COG1773 Rubredoxin Xfa Xylella fastidiosa 9a5c
          Length = 57

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 39/54 (72%)

Query: 8  YKTWMCLICGWVYDEEAGLPDEDIAPGTRWEDVPINWTCPECGARKEDFEMVAL 61
          ++TW C +CG++Y EE G P+E IA GTRWEDV   W CP+CG  K DFEMV +
Sbjct: 3  WRTWRCTVCGFLYREEEGFPEEGIAAGTRWEDVSEEWVCPDCGIGKADFEMVIV 56


>Rv3250c [C] COG1773 Rubredoxin Mtu Mycobacterium tuberculosis H37Rv
          Length = 60

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 42/56 (75%)

Query: 6  TEYKTWMCLICGWVYDEEAGLPDEDIAPGTRWEDVPINWTCPECGARKEDFEMVAL 61
           +YK + C+ CG+ YDE  G P++ IA GTRW+D+P +W+CP+CGA K DFEMV +
Sbjct: 2  NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEV 57