BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0002.p         (111 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1828 [IQR] COG1028 Dehydrogenases with different specificities...    80   9e-16
CC1816 [IQR] COG1028 Dehydrogenases with different specificities...    74   1e-13
SMb20493 [IQR] COG1028 Dehydrogenases with different specificiti...    72   2e-13
SA0122 [IQR] COG1028 Dehydrogenases with different specificities...    70   1e-12
mlr6807 [IQR] COG1028 Dehydrogenases with different specificitie...    69   2e-12

>PA1828 [IQR] COG1028 Dehydrogenases with different specificities (related
           to short-chain alcohol dehydrogenases) Pae Pseudomonas
           aeruginosa
          Length = 255

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 61/100 (61%)

Query: 9   RVALVTGGAMGIGAAISQRLARDGYTVLVSDINLEAATATADKINADGGKAAPLAMDVSK 68
           ++A V+G + GIG AI++ LA+ G  V+VS   ++   A AD I A+GGKA  +A  + +
Sbjct: 12  KIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKIDGCQAVADAITAEGGKATAIACHIGE 71

Query: 69  PESIGKAFADVEKDYGRCDVLVNNAEKDYGRCDVLWISIG 108
            E I   FA + + +GR D+LVNNA  +   C+VL   +G
Sbjct: 72  MEQIQNVFAQIREQFGRLDILVNNAATNPQFCNVLETDLG 111


>CC1816 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Ccr
          Caulobacter vibrioides
          Length = 521

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 8  ARVALVTGGAMGIGAAISQRLARDGYTVLVSDINLEAATATADKINADGGKAAPLAMDVS 67
          +RV LVTGGA GIG A  QR AR G  VLV+D N+E A   AD +  D      +AMDVS
Sbjct: 7  SRVVLVTGGADGIGWAACQRFARAGDQVLVADRNVERARERADSLGPDHHA---IAMDVS 63

Query: 68 KPESIGKAFADVEKDYGRCDVLVNNA 93
              I + F  + +++GR DVLVNNA
Sbjct: 64 SEAQIREGFEQLHREFGRLDVLVNNA 89


>SMb20493 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Sme
          Sinorhizobium meliloti
          Length = 244

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 9  RVALVTGGAMGIGAAISQRLARDGYTVLVSDI-NLEAATATADKINADGGKAAPLAMDVS 67
          +VA+VTG + GIGAAI+ RLA DG+TV+++      AA   A KI A GGKA     DVS
Sbjct: 5  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 64

Query: 68 KPESIGKAFADVEKDYGRCDVLVNNA 93
           P ++ + FA  E+ +G  DVLVNNA
Sbjct: 65 DPAAVRRLFATAEEAFGGVDVLVNNA 90


>SA0122 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Sau
          Staphylococcus aureus N315
          Length = 258

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 51/85 (60%)

Query: 9  RVALVTGGAMGIGAAISQRLARDGYTVLVSDINLEAATATADKINADGGKAAPLAMDVSK 68
          +VALVTGGA GIG  I++RL  DG+ V V D N E A A A K+++DG KA  +  DVS 
Sbjct: 5  KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSN 64

Query: 69 PESIGKAFADVEKDYGRCDVLVNNA 93
           + +  A       +G   V+VNNA
Sbjct: 65 RDDVFNAVRQTAAQFGDFHVMVNNA 89


>mlr6807 [IQR] COG1028 Dehydrogenases with different specificities
          (related to short-chain alcohol dehydrogenases) Mlo
          Mesorhizobium loti
          Length = 248

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 9  RVALVTGGAMGIGAAISQRLARDGYTVLVSDINLEAATATADKINADGGKAAPLAMDVSK 68
          + ALVTG A GIG AI+ RLA DG TV+VSDIN E A A A  I   G KA  +A D+S 
Sbjct: 8  KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISD 64

Query: 69 PESIGKAFADVEKDYGRCDVLVNNAE 94
          P S+   FA+++   G  D+LVNNA 
Sbjct: 65 PGSVKALFAEIQALTGGIDILVNNAS 90