BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0042.p (285 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 371 e-102 mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 139 6e-33 AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran... 134 2e-31 RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 134 3e-31 AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 133 4e-31 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust. Identities = 181/237 (76%), Positives = 206/237 (86%) Query: 49 WQWGPGWLGMPEYILPNLSHVLRESVVMWNNNDLLTHFGITAMEVVFGFLFGALLGLAVG 108 WQWGPG LGMPE++LP LS V E V MW+ LL H IT++E+V GF GALLG+++G Sbjct: 22 WQWGPGLLGMPEFVLPGLSRVAAEGVAMWHGAGLLEHTAITSLEIVVGFALGALLGVSIG 81 Query: 109 VALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIVFFPIMINVL 168 VALGLSP EAMLSPYILALQIAPKVAFAPLFVMWLGYT+YPKI++AVLIVFFP+MINVL Sbjct: 82 VALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWLGYTVYPKILIAVLIVFFPVMINVL 141 Query: 169 SAVRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIGVTVGELVGG 228 SA+RTVDPDM+NLVR ++A RWQIF LVEF SA+ ALFSGLRIASTL+VIGVTVGELVGG Sbjct: 142 SAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAALFSGLRIASTLAVIGVTVGELVGG 201 Query: 229 NQGLGYLLVDGEGQGNTAAVFVAICALTLIGIVTYGAVVWAERRVLHYLPKVHTSTV 285 N+GLG+LLVD EGQGNTA VFVAI LTLIG++ YGAVVWAE+RVLHYLPK + TV Sbjct: 202 NKGLGFLLVDAEGQGNTAGVFVAIVMLTLIGVLAYGAVVWAEKRVLHYLPKANLGTV 258 >mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 275 Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 133/228 (58%), Gaps = 2/228 (0%) Query: 56 LGMPEYILPNLSHVLRESVVMWNNNDLLTHFGITAMEVVFGFLFGALLGLAVGVALGLSP 115 + +I+P S + + V W L+ +TA E++FGFL ++G+A+ + + Sbjct: 50 FAISAFIIPAPSEIAQSLVAQWGT--LMQATLVTAGEILFGFLVSVVVGIAIALVIVRFD 107 Query: 116 RAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIVFFPIMINVLSAVRTVD 175 L P ++ Q PKVA AP+F++W GY + PKI + ++I FFP+ +++L+ +++VD Sbjct: 108 WLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSMLAGMQSVD 167 Query: 176 PDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIGVTVGELVGGNQGLGYL 235 +++L+ ++ A R QI + +LP L +G +IA+TLSVIG VGE G + GLGY+ Sbjct: 168 RSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEFAGASDGLGYV 227 Query: 236 LVDGEGQGNTAAVFVAICALTLIGIVTYGAVVWAERRVLHYLPKVHTS 283 + Q +TA VF A+ ++++GI Y A ER V+ + PK S Sbjct: 228 IQFASTQLDTALVFAALLLVSVLGIAFYYAAEILERIVVPWAPKFSQS 275 >AGl128GM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 267 Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/224 (37%), Positives = 136/224 (60%), Gaps = 4/224 (1%) Query: 49 WQWGPGWLGMPEYILPNLSHVLRESVVMWNNNDLLTHFGITAME-VVFGFLFGALLGLAV 107 W+ L +PEYILP S V + ++NN ++ + ++ +V GFL ++G + Sbjct: 26 WEIAVRALKVPEYILPAPSRVFAD---LYNNVPVVFTASLYTLQPMVLGFLVAVVMGTLL 82 Query: 108 GVALGLSPRAEAMLSPYILALQIAPKVAFAPLFVMWLGYTIYPKIIVAVLIVFFPIMINV 167 + + S EA+ P ++ LQI PK+A APLF++W+G+ + KI++ L+ FFPI++N Sbjct: 83 ALLVVYSRAFEAIFYPLLVILQIIPKIAIAPLFIIWVGFGLPSKILLVFLLSFFPIVVNS 142 Query: 168 LSAVRTVDPDMVNLVRTLNAGRWQIFHLVEFRSALPALFSGLRIASTLSVIGVTVGELVG 227 + A ++++PD+ +L ++ AGR +IF VE ALP+LF+G ++A+ LS V E V Sbjct: 143 IVAFKSIEPDVYDLAKSYRAGRLKIFWKVELPGALPSLFAGFKVAAALSATAAVVAEFVA 202 Query: 228 GNQGLGYLLVDGEGQGNTAAVFVAICALTLIGIVTYGAVVWAER 271 + GLGYLL++ G NT+ F I L+L+G++ YG V ER Sbjct: 203 SDNGLGYLLLNYNGNMNTSMTFAVIIVLSLLGLLLYGIVELIER 246 >RSc1200 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 263 Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 108/202 (53%) Query: 78 NNNDLLTHFGITAMEVVFGFLFGALLGLAVGVALGLSPRAEAMLSPYILALQIAPKVAFA 137 D+ H G+T E V F G GL G+ L LSP A A+L PYI A P+V A Sbjct: 55 TEGDIYQHLGVTLAETVLAFGIGTATGLGAGLWLALSPSASAVLDPYIKAANSMPRVILA 114 Query: 138 PLFVMWLGYTIYPKIIVAVLIVFFPIMINVLSAVRTVDPDMVNLVRTLNAGRWQIFHLVE 197 P+F +W G I+ K+ +AV +VFF + NV V+ V P ++ R L A R Q+ V Sbjct: 115 PIFGVWFGLGIWSKVALAVTLVFFIVFFNVYQGVKEVSPVVLANARMLGASRRQLLRFVY 174 Query: 198 FRSALPALFSGLRIASTLSVIGVTVGELVGGNQGLGYLLVDGEGQGNTAAVFVAICALTL 257 SA +FS L + L+ +G VGE +G +G+GYL++ EG + VF I LT+ Sbjct: 175 LPSATSWVFSSLHTSVGLAFVGAVVGEYLGSARGVGYLILQAEGTFDINTVFAGIVVLTV 234 Query: 258 IGIVTYGAVVWAERRVLHYLPK 279 +V V AE+R++ + PK Sbjct: 235 FALVLDWLVGLAEKRLMRWQPK 256 >AGl1202 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 265 Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/260 (30%), Positives = 135/260 (51%), Gaps = 2/260 (0%) Query: 20 IAKVKRPLLNERARTVCGSLVVLVLFLASWQWGPGWLGMPEYILPNLSHVLRESVVMWNN 79 +AK ++ + R + + +LV+ L WQ G + + P ++++ + + Sbjct: 1 MAKWRKAMQAVNVRII--QVALLVVLLGGWQLGVSSGAIDRFFFPAPYDIVKQVIDWVAD 58 Query: 80 NDLLTHFGITAMEVVFGFLFGALLGLAVGVALGLSPRAEAMLSPYILALQIAPKVAFAPL 139 H GIT E V G++ G LG+ GV LGLSP +L P+I A+ P+V AP+ Sbjct: 59 AGFYKHVGITLSETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPI 118 Query: 140 FVMWLGYTIYPKIIVAVLIVFFPIMINVLSAVRTVDPDMVNLVRTLNAGRWQIFHLVEFR 199 FV+WLG ++ K+ +AV +VFF N + VR V+P +++ R L A R + V F Sbjct: 119 FVLWLGLGLWSKVALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKRSDLLRHVYFP 178 Query: 200 SALPALFSGLRIASTLSVIGVTVGELVGGNQGLGYLLVDGEGQGNTAAVFVAICALTLIG 259 +A + S LR + +V+G +GE +G + GLGYL+ EG + VF I L + Sbjct: 179 AAASWILSSLRTSVGFAVVGAIIGEYLGASAGLGYLIARSEGNFDAVGVFAGIIILAVFV 238 Query: 260 IVTYGAVVWAERRVLHYLPK 279 ++ + AE++++ + P Sbjct: 239 LIIDLILDVAEKKLITWRPN 258