BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0040.p (261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3514 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 410 e-114 RSc1199 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 216 3e-56 MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 214 1e-55 SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate tran... 209 6e-54 MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 208 1e-53 >PA3514 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 283 Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/260 (76%), Positives = 223/260 (85%), Gaps = 1/260 (0%) Query: 2 IEIEFRNVGKSFVDRQTSQPRAAVTNVNLSIRSGEVVSIIGPSGCGKSTLLNMGAGLYLP 61 +EIEFR V K F R S AV ++L+IR GEVVSIIGPSGCGKSTLLNMGAGLY P Sbjct: 25 LEIEFRGVAKHFPGRGKSAATLAVQGLDLAIRRGEVVSIIGPSGCGKSTLLNMGAGLYAP 84 Query: 62 TSGEVIVGGQRVTKPVRNVAFMLQKDLLMPWRNIRANVSLGLEIDGVNAAERKRVADELL 121 + GEV VGG+RV+ PVR V+FMLQKDLLMPWR+IR N+ LGLEIDG A ER+ +A+E+L Sbjct: 85 SEGEVRVGGERVSGPVRKVSFMLQKDLLMPWRSIRRNIELGLEIDGRAAGERRAIAEEML 144 Query: 122 AKCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLMDEPFSALDAQTKMVLQQDLAK 181 KCHL GF EHYP+QLSGGMRQRAALARTLA DPQVL +DEPFSALDAQTKM+LQQDLA+ Sbjct: 145 EKCHLAGFAEHYPFQLSGGMRQRAALARTLATDPQVLFLDEPFSALDAQTKMILQQDLAR 204 Query: 182 MLFEKKKTALFITHDLVEAIALSDRLLVMSERPGTIIEEIEVNLPFRDNPLERRKLPEIG 241 ML E++KTALFITHDLVEAIA+SDR+LVMS RPGTI+EEIEV LP RDNPLERRKLPEIG Sbjct: 205 MLCEQRKTALFITHDLVEAIAMSDRILVMSARPGTIVEEIEVGLPLRDNPLERRKLPEIG 264 Query: 242 PLQGRLMELLKVGKETAELH 261 PL GRLM LLKVG E+AELH Sbjct: 265 PLVGRLMTLLKVG-ESAELH 283 >RSc1199 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Rso Ralstonia solanacearum Length = 270 Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/251 (44%), Positives = 164/251 (65%), Gaps = 2/251 (0%) Query: 4 IEFRNVGKSFVDR-QTSQPRAAVTNVNLSIRSGEVVSIIGPSGCGKSTLLNMGAGLYLPT 62 + F + +F+ Q +Q AV + +L +++GE VS++GP+GCGKSTLLN+ AGL P+ Sbjct: 6 LSFDRITCTFISADQPAQRYTAVQDTSLDVQAGEFVSVVGPTGCGKSTLLNLAAGLLQPS 65 Query: 63 SGEVIVGGQRVTKPVRNVAFMLQKDLLMPWRNIRANVSLGLEIDGVNAAERKRVADELLA 122 SG+V V G+ + R +M Q + LMPWR+ NV GLE G+ AAE + +A LA Sbjct: 66 SGQVRVFGEPLAGINRRAGYMFQAEALMPWRSALGNVLAGLEFRGMPAAEAQDLARSWLA 125 Query: 123 KCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLMDEPFSALDAQTKMVLQQDLAKM 182 + L GFE+ YP+QLSGGMR+R +LA+TL +DP ++LMDEPFSALD QT+ +++ ++ + Sbjct: 126 RVGLAGFEDRYPHQLSGGMRKRVSLAQTLVLDPDIILMDEPFSALDIQTRQLMENEVLDL 185 Query: 183 LFEKKKTALFITHDLVEAIALSDRLLVMSERPGT-IIEEIEVNLPFRDNPLERRKLPEIG 241 K+K LFITHDL EAIA+SDR++V++ PGT I E ++LP + E R Sbjct: 186 WAAKRKAVLFITHDLDEAIAMSDRVVVLAAGPGTRPIGEFAIDLPRPRDVAEIRDDAGFV 245 Query: 242 PLQGRLMELLK 252 L R+ +L+ Sbjct: 246 DLHARIWGVLR 256 >MJ0412 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mja Methanococcus jannaschii Length = 267 Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 98/202 (48%), Positives = 146/202 (72%) Query: 24 AVTNVNLSIRSGEVVSIIGPSGCGKSTLLNMGAGLYLPTSGEVIVGGQRVTKPVRNVAFM 83 A+ N+NL + E ++++GPSGCGK+TLL + AGL PT G+V++ G+ V P + + Sbjct: 35 ALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEGKVLLDGKEVKGPGADRGVV 94 Query: 84 LQKDLLMPWRNIRANVSLGLEIDGVNAAERKRVADELLAKCHLKGFEEHYPYQLSGGMRQ 143 Q+ LMPWR + NV+ GLE+ G+ ER +A + + L+GFE+ YPYQLSGGM+Q Sbjct: 95 FQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKMVGLEGFEDAYPYQLSGGMQQ 154 Query: 144 RAALARTLAVDPQVLLMDEPFSALDAQTKMVLQQDLAKMLFEKKKTALFITHDLVEAIAL 203 R A+ARTLA DP+++LMDEPF+ALDAQT+ +LQ +L K+ ++KKT F+TH + EA+ L Sbjct: 155 RVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIWQKEKKTVFFVTHSVDEAVYL 214 Query: 204 SDRLLVMSERPGTIIEEIEVNL 225 SDR++V++ RPG I E ++++L Sbjct: 215 SDRVVVLTARPGRIKEIVKIDL 236 >SMc02346 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Sme Sinorhizobium meliloti Length = 278 Score = 209 bits (532), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 111/239 (46%), Positives = 153/239 (64%), Gaps = 1/239 (0%) Query: 14 VDRQTSQPRAAVTNVNLSIRSGEVVSIIGPSGCGKSTLLNMGAGLYLPTSGEVIVGGQRV 73 VD TS A + V+LSI GE ++++GPSG GKS LL++ AGL TSG + G V Sbjct: 23 VDGVTSNRIAVLDGVDLSIDRGEFITLVGPSGSGKSVLLDVIAGLTGATSGVASIDGIEV 82 Query: 74 TKPVRNVAFMLQKDLLMPWRNIRANVSLGLEIDGVNAAERKRVADELLAKCHLKGFEEHY 133 +KP A++ Q+ L PWR NV LE+ GV AAER+ A L L GFE+ + Sbjct: 83 SKPHARTAYVFQQYALFPWRTALQNVEYALEVRGVPAAERREKARHFLHLFGLNGFEDRF 142 Query: 134 PYQLSGGMRQRAALARTLAVDPQVLLMDEPFSALDAQTKMVLQQDLAKMLFEKKKTALFI 193 P QLSGGM+QR A+AR L+ DPQVLLMDEPF+ALDAQT+ +LQ +L ++ + K T +F+ Sbjct: 143 PSQLSGGMQQRVAIARALSTDPQVLLMDEPFAALDAQTRDILQSELLRIWEQIKTTVVFV 202 Query: 194 THDLVEAIALSDRLLVMSERPGTIIEEIEVNLPFRDNPLERRKLPEIGPLQGRLMELLK 252 TH + EAI L+DR++VM+ RP + E +E++LP R L+ R +GR+ E L+ Sbjct: 203 THSIDEAIYLADRVVVMTARPARVKEIVEIDLP-RPRDLDIRNGEAFNAYRGRVWESLR 260 >MA0063 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 268 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 105/252 (41%), Positives = 160/252 (63%), Gaps = 4/252 (1%) Query: 1 MIEIEFRNVGKSFVDRQTSQPRAAVTNVNLSIRSGEVVSIIGPSGCGKSTLLNMGAGLYL 60 M + +NV + F ++ A+ N++ ++ GE + ++GPSGCGK+TLL + AGL Sbjct: 15 MGRVSVKNVSRVFSKKEDESGTEALHNISFDVQDGEFICLLGPSGCGKTTLLRIAAGLET 74 Query: 61 PTSGEVIVGGQRVTKPVRNVAFMLQKDLLMPWRNIRANVSLGLEIDGVNAAERKRVADEL 120 TSGE+ + G +T P + Q+ L PWR + N++ GLE+ G+ +E ++ ++ Sbjct: 75 LTSGEITLNGVPITGPDPKRGMVFQQYSLFPWRTVIDNITFGLEMQGIKKSEARKQVEKY 134 Query: 121 LAKCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLMDEPFSALDAQTKMVLQQDLA 180 L L F+ YP++LSGGM+QRAA+AR LA +P+VLLMDEPF ALDAQT+ VLQ +L Sbjct: 135 LELVGLGQFKNSYPHELSGGMQQRAAIARALANEPEVLLMDEPFGALDAQTRNVLQDELL 194 Query: 181 KMLFEKKKTALFITHDLVEAIALSDRLLVMSERPGTIIEEIEVNLPFRDNPLERRKLPEI 240 K+ +K T LF+TH + EA+ LSDR++VM+ RPG + E + V LP P R PE+ Sbjct: 195 KIWEQKHVTFLFVTHSVDEAVFLSDRIVVMTSRPGRVKEIVSVELP---RPRSRTS-PEV 250 Query: 241 GPLQGRLMELLK 252 L+ +++LL+ Sbjct: 251 NRLRDHVLKLLE 262