BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0033.p (222 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0111_2 [E] COG0765 ABC-type amino acid transport system, perm... 141 9e-34 sll1270_2 [E] COG0765 ABC-type amino acid transport system, perm... 141 1e-33 AF0232 [E] COG0765 ABC-type amino acid transport system, permeas... 140 3e-33 DR2155 [E] COG0765 ABC-type amino acid transport system, permeas... 138 9e-33 glnP [E] COG0765 ABC-type amino acid transport system, permease ... 138 1e-32 >CAC0111_2 [E] COG0765 ABC-type amino acid transport system, permease component Cac Clostridium acetobutylicum Length = 214 Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 128/195 (65%) Query: 19 GFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVEVFRCTPVLVQLVWFYYA 78 G G TL TV +++ L IG G +ST+ +++ R +V++ R TP+LVQ + ++ Sbjct: 15 GLGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGTPLLVQAFFIFFG 74 Query: 79 LPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQSEAGCALGMTRFQLMRRV 138 +P L G++++ + ++A++L GA+ SEI RGGI+SI+ GQ EA +LG+ M ++ Sbjct: 75 IPGLSGLKINPVVAGIIAVSLNAGAYMSEIFRGGILSINQGQMEAARSLGIPYRTAMLKI 134 Query: 139 ILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIAHETYRPLEIYTMVAVIY 198 + PQA K M P +V+Q I+ LK+TS+LSV+ + +L GQII T++ +I+ +VA++Y Sbjct: 135 VFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNTGQIIIGATFKAFQIWLIVAIMY 194 Query: 199 FLILLPATIWAKRLE 213 F+++ +I ++++E Sbjct: 195 FIVIKLLSILSRKIE 209 >sll1270_2 [E] COG0765 ABC-type amino acid transport system, permease component Syn Synechocystis Length = 255 Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/208 (41%), Positives = 124/208 (59%), Gaps = 6/208 (2%) Query: 12 FRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVEVFRCTPVLVQ 71 FRN+ G T+ T V GL+ G V + +S + R YVE FR TP+LVQ Sbjct: 32 FRNLFK-GSILTVLLTAFSVFFGLIGGTGVAIALISDIKPLQLIFRIYVEFFRGTPMLVQ 90 Query: 72 LVWFYYALPVL-----VGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQSEAGCA 126 L Y+ LP L +GI + +A++AL+L A+ +EIIRGGI SID GQ EA + Sbjct: 91 LFIIYFGLPALFKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQGQWEACES 150 Query: 127 LGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIAHETYR 186 LGM+ +Q M+ VI PQAF+R+ PPL ++ I +K+TSL +V+ +L +GQ+I TYR Sbjct: 151 LGMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQLIVATTYR 210 Query: 187 PLEIYTMVAVIYFLILLPATIWAKRLEN 214 E+Y VA++Y L+ ++ K LEN Sbjct: 211 AFEVYIAVALVYLLLTTISSFVFKWLEN 238 >AF0232 [E] COG0765 ABC-type amino acid transport system, permease component Afu Archaeoglobus fulgidus Length = 224 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 126/218 (57%), Gaps = 1/218 (0%) Query: 3 HWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVEV 62 +D + +A G TL T+ + GL+IG GLGR+S NPL AYVEV Sbjct: 6 QFDIDLFIRILPDLAFGASVTLKLTLISIFFGLIIGTIAGLGRVSKNPLPFAISTAYVEV 65 Query: 63 FRCTPVLVQLVWFYYALPVLVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQSE 122 R TP+LVQ++ Y+ LP +GI + + ++AL++ GA+ +EI+R GI SI IGQ E Sbjct: 66 IRGTPLLVQILIVYFGLPA-IGINLQPEPAGIIALSICSGAYIAEIVRAGIESIPIGQME 124 Query: 123 AGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIAH 182 A +LGMT Q MR VI PQAF+ + P L ++ I LK++SLLSV+++ +L G+ I + Sbjct: 125 AARSLGMTYLQAMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVISIVELTRVGRQIVN 184 Query: 183 ETYRPLEIYTMVAVIYFLILLPATIWAKRLENRLTAQQ 220 T+ + VA+ Y ++ +P + + +L Q Sbjct: 185 TTFNAWTPFLGVALFYLMMTIPLSRLVAYSQKKLGTYQ 222 >DR2155 [E] COG0765 ABC-type amino acid transport system, permease component Dra Deinococcus radiodurans Length = 291 Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 132/211 (62%), Gaps = 5/211 (2%) Query: 11 QFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVEVFRCTPVLV 70 Q+ ++ G TL T+ L+GLL+G+ G+ R S + LV P ++ + R TP+LV Sbjct: 76 QYADLFVEGAQMTLKLTLVSGLIGLLVGMIAGIMRSSPSALVRAPASFFIWLIRGTPLLV 135 Query: 71 QLVWFYYALPVL-----VGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQSEAGC 125 Q+++ Y ALP L + +E++ SA++ALAL GA+ +E+IR GI+++ GQSEA Sbjct: 136 QILFVYNALPPLLKTIGINLELNEFWSAVIALALNVGAYNAEVIRAGILAVPRGQSEAAR 195 Query: 126 ALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIAHETY 185 +LG++ Q M V+LPQA + + PPLV+ + LK++SL S +A+ +L GQ ++ E++ Sbjct: 196 SLGLSAGQTMNAVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELTLSGQRVSSESF 255 Query: 186 RPLEIYTMVAVIYFLILLPATIWAKRLENRL 216 +P+ + T VA +Y + T++ +LE R+ Sbjct: 256 QPVPVLTTVAAVYLALTTVLTLFTDQLEKRV 286 >glnP [E] COG0765 ABC-type amino acid transport system, permease component Eco Escherichia coli K12 Length = 219 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 131/215 (60%), Gaps = 1/215 (0%) Query: 3 HWDFAALWQFRNVIAVGFGYTLAYTVACVLLGLLIGLAVGLGRLSTNPLVSGPLRAYVEV 62 +D++A+W ++ G TL +V + GL+IGL G R + + ++EV Sbjct: 2 QFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEV 61 Query: 63 FRCTPVLVQLVWFYYALPV-LVGIEMSAGTSALLALALYGGAFYSEIIRGGIVSIDIGQS 121 R TP++VQ+++ Y+ALP+ + + T+A++ + + GA+ +EI RG ++SI G Sbjct: 62 IRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFR 121 Query: 122 EAGCALGMTRFQLMRRVILPQAFKRMTPPLVSQSIMQLKNTSLLSVLAVPDLLYQGQIIA 181 EAG ALG++R++ +R VILP A +RM PPL +Q I+ +K+TSL V+ V +L QGQ I Sbjct: 122 EAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEII 181 Query: 182 HETYRPLEIYTMVAVIYFLILLPATIWAKRLENRL 216 +R LEI++ VAV Y +I L + +RLE R+ Sbjct: 182 AGNFRALEIWSAVAVFYLIITLVLSFILRRLERRM 216