BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0016.p (316 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 398 e-111 PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reduc... 245 1e-64 SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 230 4e-60 CC2394 Non COG 228 2e-59 SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH re... 228 2e-59 >PA3498 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 318 Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/313 (64%), Positives = 238/313 (76%), Gaps = 3/313 (0%) Query: 6 LSVRVQAIRFEAQGIVSVELVSPEGAE-LPAFEAGSHVDLHLANGIVRSYSLLNAPAERH 64 L+ V +RFEAQGI+ VEL P+G + P F AG+H+DLHL NG+VRSYSLLN+P + Sbjct: 7 LAAFVHTLRFEAQGILGVEL-RPQGDQVFPPFSAGAHIDLHLPNGLVRSYSLLNSPEDCG 65 Query: 65 RYVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPIS 124 RYV+G+L DR SRGGS +VH+ LRVG L+IS PRN FP++E+A HSVL+AGGIG+TPI Sbjct: 66 RYVLGILRDRGSRGGSAFVHDSLRVGMQLQISRPRNLFPLEENAAHSVLVAGGIGVTPIY 125 Query: 125 CMLNYLRGKGKSAELLYCARSRAEAAFASELL-QQTGVSSHFDAEKGAPPDLRAFLASKP 183 CM N LR G+S ELLYCARSR EAAF EL + HFD EKG P DL AFL ++ Sbjct: 126 CMFNRLRALGRSVELLYCARSRQEAAFVEELAASDAAIQLHFDDEKGGPMDLGAFLGARA 185 Query: 184 KDAHFYCCGPTPMLNAFEAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSKKSVT 243 AHFYCCGPTPM++AFE C LG P+VHIERFAAA A Y LARS S+ Sbjct: 186 STAHFYCCGPTPMIDAFETHCERLGHPHVHIERFAAAPQAPAAPQGSYEVRLARSGTSIE 245 Query: 244 VPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMMMVC 303 VP+GKSLLDALL+AG+ V+ SCREGVCG+CET+VLEGEPEHRDGVL+KAEK +N+ MMVC Sbjct: 246 VPSGKSLLDALLEAGVAVDCSCREGVCGSCETRVLEGEPEHRDGVLTKAEKIANQTMMVC 305 Query: 304 VSGCKGRRLVLDL 316 VSGCKG RLVLDL Sbjct: 306 VSGCKGSRLVLDL 318 >PA4905 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Pae Pseudomonas aeruginosa Length = 317 Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 147/319 (46%), Positives = 186/319 (58%), Gaps = 9/319 (2%) Query: 5 LLSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERH 64 ++ V V AIR EAQ I S EL +GA LP+FE G+H+DLHL NG+VR YSL PAER Sbjct: 1 MIEVIVGAIRLEAQDIHSFELFRADGAALPSFEPGAHIDLHLPNGLVRQYSLCG-PAERP 59 Query: 65 R-YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPI 123 R Y + VL R+SRGGS +H +LRVG L I PRN FP+ +L AGGIGITP+ Sbjct: 60 RHYRIAVLRCRDSRGGSATLHAELRVGQRLHIGEPRNLFPLSPEPGPHLLFAGGIGITPL 119 Query: 124 SCMLNYLRGKGKSAELLYCARSRAEAAFASELLQ---QTGVSSHFD-AEKGAPPDLRAFL 179 M L G +L YCA S AAF L + V HFD E DLRA L Sbjct: 120 LAMAERLARDGADFQLHYCAHSGERAAFVDYLGRCAFADRVHCHFDHGESSRRADLRALL 179 Query: 180 ASKPKDAHFYCCGPTPMLNAFEAICAELGL--PNVHIERFAAAENVEAVQGDEYVAELAR 237 A+ P+DA Y CGP + E ELG +H E FAAA + G + +LA Sbjct: 180 ATSPRDAQLYLCGPAGFMQWIEESARELGWEASRLHREHFAAAPRDASADG-TFEVQLAS 238 Query: 238 SKKSVTVPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASN 297 + + V AG+++L AL +AG+D+ SC +G+CG C T+VL+GEPEHRD LS+ E+A+N Sbjct: 239 NGALIRVAAGQTVLAALREAGVDLPASCEQGICGTCLTRVLDGEPEHRDLYLSEEEQAAN 298 Query: 298 KMMMVCVSGCKGRRLVLDL 316 C S + RLVLDL Sbjct: 299 DCFTPCCSRSRSPRLVLDL 317 >SMa1500_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 127/320 (39%), Positives = 176/320 (55%), Gaps = 19/320 (5%) Query: 8 VRVQAIR--FEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 +RV R A GI + EL P LP F+ G+H+D+H+ NG++R YS+ N P E Sbjct: 1 IRVTVARKWMAADGIAAFEL-RPIKGLLPTFQPGAHIDVHMPNGLIRQYSITNGPGESDS 59 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 YV+GV +R S+GGSR +HE LR G L IS PRNNFP+ A ++ +AGGIG TP+ Sbjct: 60 YVIGVKLERESKGGSRCMHETLRAGDVLAISEPRNNFPLRRDAEKTIFVAGGIGATPLIA 119 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASE-------LLQQTGVSSHFDAEKGAPPDLRAF 178 M L+ + Y A+++A+ AF + L Q G+ +G L+ Sbjct: 120 MAQALKNQSLDFAFHYFAQNQAQLAFPEKTALLGEALKPQLGLDP-----EGTEAKLKDI 174 Query: 179 LASKPKDAHFYCCGPTPMLNAFEAICAELGLPN--VHIERFAAAENVEAVQGDEYVAELA 236 L+ H Y CGP PML A I AE+G P VH E F ++ + LA Sbjct: 175 LSGYRPGMHVYLCGPGPMLEAARRIAAEVGWPETAVHFEYFKNTNTID--DSSSFEVALA 232 Query: 237 RSKKSVTVPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKAS 296 RS + VPAG+++LD + + G+D+ SC +G CG C V+EGEP+H+D L+ AE+ S Sbjct: 233 RSCVTFKVPAGRTILDVMREVGIDMPSSCEQGACGTCLATVIEGEPDHQDVYLNDAERKS 292 Query: 297 NKMMMVCVSGCKGRRLVLDL 316 +M CVS K RLVLDL Sbjct: 293 GTKIMTCVSRAKSARLVLDL 312 >CC2394 Non COG Length = 316 Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 135/317 (42%), Positives = 178/317 (56%), Gaps = 6/317 (1%) Query: 5 LLSVRVQAIRFEAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERH 64 ++ VRV + A+GI ++LV EG +LPAFEAG+H+DL L NG+ R YSL + PAER Sbjct: 1 MIKVRVASRARAAEGIAQLDLVCAEGRDLPAFEAGAHIDLFLGNGLTRQYSLCSDPAERS 60 Query: 65 RYVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPIS 124 Y + VL + SRGGS YVHE L GATL IS PRN F +DE+A +L AGG+G+TPI Sbjct: 61 FYRIAVLRELTSRGGSAYVHEALTEGATLEISPPRNLFALDETAEEHLLFAGGVGVTPIL 120 Query: 125 CMLNYLRGKGKSAELLYCARSRAEAAFASELLQ---QTGVSSHFDAEKGAPPDLRAFLAS 181 M L G++ YCAR R+ AAF +EL + V FDAE DL LA Sbjct: 121 AMAKRLSALGRAFTFHYCARDRSRAAFLNELSTAPFTSAVRLSFDAEPDTRLDLDVALAR 180 Query: 182 KPKDAHFYCCGPTPMLNAF--EAICAELGLPNVHIERFAAAENVEAVQGDEYVAELARSK 239 Y CGP + A+ + E FAAA + A Q + +A S Sbjct: 181 PKPGRRLYVCGPGGFMTHVIDGALARGWSGDQIRKEHFAAAP-LSAGQDQPFELVIASSG 239 Query: 240 KSVTVPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKM 299 + VTV A ++ AL AG+ V SC +GVCG C T+V++G+P+HRD + E+A+N Sbjct: 240 QIVTVAADQTAAQALEAAGVFVPVSCEQGVCGTCLTRVIDGQPDHRDAFQTDEERAANDQ 299 Query: 300 MMVCVSGCKGRRLVLDL 316 C S + RLVLDL Sbjct: 300 FTPCCSRARSPRLVLDL 316 >SMa2117_2 [C] COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 Sme Sinorhizobium meliloti Length = 312 Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/315 (41%), Positives = 180/315 (57%), Gaps = 11/315 (3%) Query: 8 VRVQAIRF--EAQGIVSVELVSPEGAELPAFEAGSHVDLHLANGIVRSYSLLNAPAERHR 65 +RVQ R A GI++ +L P LP F+ G+H+D+HL NG+VR YSL N P E Sbjct: 1 IRVQVARKWQTADGIMAFQL-RPVRGLLPTFQPGAHIDVHLPNGLVRQYSLTNGPGETDC 59 Query: 66 YVVGVLNDRNSRGGSRYVHEQLRVGATLRISAPRNNFPVDESATHSVLIAGGIGITPISC 125 + +GV D SRGGS+ +H+ +R G L IS PRNNFP+ A ++ +AGGIG+TP+ Sbjct: 60 FTIGVKLDPASRGGSQCLHDSVREGDVLAISEPRNNFPLRRDALKTIFVAGGIGVTPLLA 119 Query: 126 MLNYLRGKGKSAELLYCARSRAEAAFASELLQQTG--VSSHFDAEKG-APPDLRAFLASK 182 M L + EL Y A++ + AF SE Q G V H G +LR L++ Sbjct: 120 MAQTLNNQSLDYELHYFAQNEQQLAF-SECRQALGDAVKPHLGLSPGDTVKELRRLLSAY 178 Query: 183 PKDAHFYCCGPTPMLNAFEAICAELGLPN--VHIERFAAAENVEAVQGDEYVAELARSKK 240 D Y CGP PML + ++ AE G P VH E F ++ + LARS Sbjct: 179 LPDTQLYVCGPGPMLESTRSLAAEAGWPEAAVHFEYFKNTNVID--DSSSFEVALARSCL 236 Query: 241 SVTVPAGKSLLDALLDAGLDVEHSCREGVCGACETKVLEGEPEHRDGVLSKAEKASNKMM 300 ++ V AG+S+L+A+ +AG+D+ SC +G CG C V+EGEP+H+D LS +E+AS + Sbjct: 237 TIKVAAGQSILEAMREAGVDLPSSCEQGACGTCLATVIEGEPDHQDVYLSPSERASGTKI 296 Query: 301 MVCVSGCKGRRLVLD 315 M CVS K RLVLD Sbjct: 297 MTCVSRSKSARLVLD 311