BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0093.p (288 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1405 [NT] COG1352 Methylase of chemotaxis methyl-accepting pr... 376 e-104 YPO1678 [NT] COG1352 Methylase of chemotaxis methyl-accepting pr... 305 9e-83 ZcheR [NT] COG1352 Methylase of chemotaxis methyl-accepting prot... 299 5e-81 ECs2594 [NT] COG1352 Methylase of chemotaxis methyl-accepting pr... 299 5e-81 cheR [NT] COG1352 Methylase of chemotaxis methyl-accepting prote... 298 1e-80 >RSp1405 [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins Rso Ralstonia solanacearum Length = 292 Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust. Identities = 174/285 (61%), Positives = 217/285 (76%), Gaps = 1/285 (0%) Query: 4 APQNKLDSVKEFDFTNRDFDRVRDLIYKRAGIALAESKQEMVYSRLARRLRATGIASFVQ 63 AP + + +EF FT DF R+R LIY+R GI+L++ K EMVYSRLARRLR IASF Sbjct: 6 APVSPTLASREFSFTAEDFARIRSLIYRRVGISLSDRKSEMVYSRLARRLRIVNIASFRD 65 Query: 64 YLDLLERGGDTDEWEAFTNALTTNLTSFFRESHHFPILADFVKTLKEPATVWCSAASTGE 123 YLD LE G DEWEAFTNALTTNLT+FFRE HHFPILA+ K + P +VWCSA+STGE Sbjct: 66 YLDALENGHLPDEWEAFTNALTTNLTAFFREQHHFPILAEHAKAKRTPFSVWCSASSTGE 125 Query: 124 EPYTIAMTLCEAYGTLTP-PAQIIATDIDTNVLATGANGVYPIERIDKLSPERIKKFFLR 182 EPY+IA+TL E +G+++P ++A+D+DTN LA G+YP+ER+ LS +R+KK+FLR Sbjct: 126 EPYSIAITLAETFGSMSPGQVSVVASDVDTNALARARAGIYPMERVSALSADRLKKYFLR 185 Query: 183 GKGNQEGYVRVRPELRKLVTFKQLNLLGDSWPVTGQFDVIFCRNVMIYFDKPTQSKILSR 242 G G QEGY RVRPEL+ ++ F+Q+NLL WP+T +FDVIFCRNVMIYFDKPTQ+KIL Sbjct: 186 GTGKQEGYARVRPELQAMIDFRQINLLDRDWPLTQKFDVIFCRNVMIYFDKPTQAKILEH 245 Query: 243 FVPLMKPHALLFAGHSENFLYVSDALKLKGKTVYELGAATQRKAG 287 FV +MKP LLFAGHSE+FL V+ A L+GKTVYE+ + K G Sbjct: 246 FVDVMKPDGLLFAGHSESFLQVTKAWSLRGKTVYEIAPEIRAKLG 290 >YPO1678 [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins Ype Yersinia pestis Length = 290 Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 150/267 (56%), Positives = 191/267 (71%) Query: 12 VKEFDFTNRDFDRVRDLIYKRAGIALAESKQEMVYSRLARRLRATGIASFVQYLDLLERG 71 ++ ++ F R+ LIY+RAGI LAE K+EMVY+RL RRLR I+ F QYL LLE Sbjct: 20 IQRLPLSDIHFRRICQLIYQRAGIVLAEHKREMVYNRLVRRLRLLNISDFGQYLALLESD 79 Query: 72 GDTDEWEAFTNALTTNLTSFFRESHHFPILADFVKTLKEPATVWCSAASTGEEPYTIAMT 131 ++ EW+AF NALTTNLT+FFRE+HHFP+LA+ + +VW +AASTGEEPY+IAMT Sbjct: 80 PNSAEWQAFVNALTTNLTAFFREAHHFPLLAEHARQRAGGYSVWSTAASTGEEPYSIAMT 139 Query: 132 LCEAYGTLTPPAQIIATDIDTNVLATGANGVYPIERIDKLSPERIKKFFLRGKGNQEGYV 191 LC+ G QI+A+DIDT VL +GVY + + LS ++++++FLRG G +G V Sbjct: 140 LCDVLGNRAGACQILASDIDTQVLEKATSGVYRQDELRSLSTQQMQRYFLRGTGPHQGMV 199 Query: 192 RVRPELRKLVTFKQLNLLGDSWPVTGQFDVIFCRNVMIYFDKPTQSKILSRFVPLMKPHA 251 RVRPEL LV F+QLNLL W + GQFD IFCRNVMIYFDK TQ +IL RFVPL+KP Sbjct: 200 RVRPELTNLVQFQQLNLLAPEWALPGQFDAIFCRNVMIYFDKETQERILRRFVPLLKPGG 259 Query: 252 LLFAGHSENFLYVSDALKLKGKTVYEL 278 L+FAGHSENF +S L+G+TVY L Sbjct: 260 LMFAGHSENFSQISREFYLRGQTVYGL 286 >ZcheR [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins EcZ Escherichia coli O157:H7 EDL933 Length = 286 Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 141/270 (52%), Positives = 185/270 (68%) Query: 9 LDSVKEFDFTNRDFDRVRDLIYKRAGIALAESKQEMVYSRLARRLRATGIASFVQYLDLL 68 L + ++ F R+ LIY+RAGI LA+ K++MVY+RL RRLR+ G+ F YL+LL Sbjct: 14 LQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLL 73 Query: 69 ERGGDTDEWEAFTNALTTNLTSFFRESHHFPILADFVKTLKEPATVWCSAASTGEEPYTI 128 E + EW+AF N+LTTNLT+FFRE+HHFP+LAD + VW +AASTGEEPY+I Sbjct: 74 ESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSI 133 Query: 129 AMTLCEAYGTLTPPAQIIATDIDTNVLATGANGVYPIERIDKLSPERIKKFFLRGKGNQE 188 AMTL + GT ++ A+DIDT VL +G+Y E + L+P++++++F+RG G E Sbjct: 134 AMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHE 193 Query: 189 GYVRVRPELRKLVTFKQLNLLGDSWPVTGQFDVIFCRNVMIYFDKPTQSKILSRFVPLMK 248 G VRVR EL V F LNLL + V G FD IFCRNVMIYFD+ TQ +IL RFVPL+K Sbjct: 194 GLVRVRQELANYVDFASLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLK 253 Query: 249 PHALLFAGHSENFLYVSDALKLKGKTVYEL 278 P LLFAGHSENF ++ L+G+TVY L Sbjct: 254 PDGLLFAGHSENFSHLERRFTLRGQTVYAL 283 >ECs2594 [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins Ecs Escherichia coli O157:H7 Length = 286 Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 141/270 (52%), Positives = 185/270 (68%) Query: 9 LDSVKEFDFTNRDFDRVRDLIYKRAGIALAESKQEMVYSRLARRLRATGIASFVQYLDLL 68 L + ++ F R+ LIY+RAGI LA+ K++MVY+RL RRLR+ G+ F YL+LL Sbjct: 14 LQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLL 73 Query: 69 ERGGDTDEWEAFTNALTTNLTSFFRESHHFPILADFVKTLKEPATVWCSAASTGEEPYTI 128 E + EW+AF N+LTTNLT+FFRE+HHFP+LAD + VW +AASTGEEPY+I Sbjct: 74 ESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSI 133 Query: 129 AMTLCEAYGTLTPPAQIIATDIDTNVLATGANGVYPIERIDKLSPERIKKFFLRGKGNQE 188 AMTL + GT ++ A+DIDT VL +G+Y E + L+P++++++F+RG G E Sbjct: 134 AMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHE 193 Query: 189 GYVRVRPELRKLVTFKQLNLLGDSWPVTGQFDVIFCRNVMIYFDKPTQSKILSRFVPLMK 248 G VRVR EL V F LNLL + V G FD IFCRNVMIYFD+ TQ +IL RFVPL+K Sbjct: 194 GLVRVRQELANYVDFASLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLK 253 Query: 249 PHALLFAGHSENFLYVSDALKLKGKTVYEL 278 P LLFAGHSENF ++ L+G+TVY L Sbjct: 254 PDGLLFAGHSENFSHLERRFTLRGQTVYAL 283 >cheR [NT] COG1352 Methylase of chemotaxis methyl-accepting proteins Eco Escherichia coli K12 Length = 286 Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 141/270 (52%), Positives = 185/270 (68%) Query: 9 LDSVKEFDFTNRDFDRVRDLIYKRAGIALAESKQEMVYSRLARRLRATGIASFVQYLDLL 68 L + ++ F R+ LIY+RAGI LA+ K++MVY+RL RRLR+ G+ F YL+LL Sbjct: 14 LQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLL 73 Query: 69 ERGGDTDEWEAFTNALTTNLTSFFRESHHFPILADFVKTLKEPATVWCSAASTGEEPYTI 128 E + EW+AF N+LTTNLT+FFRE+HHFP+LAD + VW +AASTGEEPY+I Sbjct: 74 ESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSI 133 Query: 129 AMTLCEAYGTLTPPAQIIATDIDTNVLATGANGVYPIERIDKLSPERIKKFFLRGKGNQE 188 AMTL + GT ++ A+DIDT VL +G+Y E + L+P++++++F+RG G E Sbjct: 134 AMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHE 193 Query: 189 GYVRVRPELRKLVTFKQLNLLGDSWPVTGQFDVIFCRNVMIYFDKPTQSKILSRFVPLMK 248 G VRVR EL V F LNLL + V G FD IFCRNVMIYFD+ TQ +IL RFVPL+K Sbjct: 194 GLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLK 253 Query: 249 PHALLFAGHSENFLYVSDALKLKGKTVYEL 278 P LLFAGHSENF ++ L+G+TVY L Sbjct: 254 PDGLLFAGHSENFSHLERRFTLRGQTVYAL 283