BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0087.p         (131 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO1680 [T] COG0784 FOG Ype Yersinia pestis                           207   4e-54
RSp1402 [T] COG0784 FOG Rso Ralstonia solanacearum                    206   7e-54
STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2                200   7e-52
cheY [T] COG0784 FOG Eco Escherichia coli K12                         198   3e-51
ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933             198   3e-51

>YPO1680 [T] COG0784 FOG Ype Yersinia pestis
          Length = 129

 Score =  207 bits (528), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/127 (81%), Positives = 112/127 (88%)

Query: 1   MAGPNTKFLVVDDFSTMRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNM 60
           MA  N +FLVVDDFSTMRRIVRNLLKELG+ NV+EAEDGV  L KLR+  FDFVVSDWNM
Sbjct: 1   MADKNLRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNM 60

Query: 61  PNMDGLTMLQEIRKDPALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKL 120
           PNMDGL +L+ IR D ALA LPVLMVTAEAKKENI+AAAQAGA+GYVVKPFTAATL+EKL
Sbjct: 61  PNMDGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL 120

Query: 121 GKIFEKL 127
            KIFEKL
Sbjct: 121 NKIFEKL 127


>RSp1402 [T] COG0784 FOG Rso Ralstonia solanacearum
          Length = 133

 Score =  206 bits (525), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 102/126 (80%), Positives = 110/126 (87%), Gaps = 2/126 (1%)

Query: 7   KFLVVDDFSTMRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNMPNMDGL 66
           +FLVVDDF TMRRIVRNLLKELG+ NVDEAEDG  GL K++   FDFV+SDWNMPNMDGL
Sbjct: 7   RFLVVDDFPTMRRIVRNLLKELGFANVDEAEDGAAGLAKVKEGRFDFVISDWNMPNMDGL 66

Query: 67  TMLQEIRKD--PALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKLGKIF 124
            MLQ IR D  P + KLPVLMVTAEAKKENI+AAAQAGANGYVVKPFTAATLDEKLGKIF
Sbjct: 67  QMLQGIRADPNPGINKLPVLMVTAEAKKENIIAAAQAGANGYVVKPFTAATLDEKLGKIF 126

Query: 125 EKLEAG 130
           EK+E G
Sbjct: 127 EKIEKG 132


>STM1916 [T] COG0784 FOG Sty Salmonella typhimurium LT2
          Length = 129

 Score =  200 bits (508), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 110/127 (86%)

Query: 1   MAGPNTKFLVVDDFSTMRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNM 60
           MA    KFLVVDDFSTMRRIVRNLLKELG+ NV+EAEDGV  L KL++  F F++SDWNM
Sbjct: 1   MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDWNM 60

Query: 61  PNMDGLTMLQEIRKDPALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKL 120
           PNMDGL +L+ IR D A++ LPVLMVTAEAKKENI+AAAQAGA+GYVVKPFTAATL+EKL
Sbjct: 61  PNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL 120

Query: 121 GKIFEKL 127
            KIFEKL
Sbjct: 121 NKIFEKL 127


>cheY [T] COG0784 FOG Eco Escherichia coli K12
          Length = 129

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 110/127 (86%)

Query: 1   MAGPNTKFLVVDDFSTMRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNM 60
           MA    KFLVVDDFSTMRRIVRNLLKELG+ NV+EAEDGV  L KL++  + FV+SDWNM
Sbjct: 1   MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM 60

Query: 61  PNMDGLTMLQEIRKDPALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKL 120
           PNMDGL +L+ IR D A++ LPVLMVTAEAKKENI+AAAQAGA+GYVVKPFTAATL+EKL
Sbjct: 61  PNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL 120

Query: 121 GKIFEKL 127
            KIFEKL
Sbjct: 121 NKIFEKL 127


>ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933
          Length = 129

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/127 (76%), Positives = 110/127 (86%)

Query: 1   MAGPNTKFLVVDDFSTMRRIVRNLLKELGYTNVDEAEDGVQGLQKLRSDTFDFVVSDWNM 60
           MA    KFLVVDDFSTMRRIVRNLLKELG+ NV+EAEDGV  L KL++  + FV+SDWNM
Sbjct: 1   MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNM 60

Query: 61  PNMDGLTMLQEIRKDPALAKLPVLMVTAEAKKENIVAAAQAGANGYVVKPFTAATLDEKL 120
           PNMDGL +L+ IR D A++ LPVLMVTAEAKKENI+AAAQAGA+GYVVKPFTAATL+EKL
Sbjct: 61  PNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKL 120

Query: 121 GKIFEKL 127
            KIFEKL
Sbjct: 121 NKIFEKL 127