BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0082.p         (265 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1454 [D] COG0455 ATPases involved in chromosome partitioning P...    76   8e-14
RSp1391 [D] COG0455 ATPases involved in chromosome partitioning ...    67   3e-11
VC2067 [D] COG0455 ATPases involved in chromosome partitioning V...    65   1e-10

>PA1454 [D] COG0455 ATPases involved in chromosome partitioning Pae
           Pseudomonas aeruginosa
          Length = 280

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 7/223 (3%)

Query: 26  INLAASLAAADHNALLVDACMTPSVILSRFGGIAVATLLDVARQERHLDEAVRMVPEGFA 85
           +NLA +LA      +L+DA +  + +    G     TL DV      L + + + P G  
Sbjct: 29  VNLALALADLGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLLGPGGVR 88

Query: 86  L--ARLSRKNVSASTHPQASRLAQIFDGLTEESDITLIN--GELNDDELLPVPAMEMGEI 141
           +  A    +++   +  Q + L Q F  +++  D+ +++    + D  +  V A +  E+
Sbjct: 89  IVPAASGTQSMVHLSPMQHAGLIQAFSDISDNLDVLVVDTAAGIGDSVVSFVRAAQ--EV 146

Query: 142 VVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVS-GGSDAEAQMVYANMAQAANRYLAA 200
           ++ +   PTSI  AY L+K L+   G   F +L +   S  E + ++A + +  +R+L  
Sbjct: 147 LLVVCDEPTSITDAYALIKLLNRDHGMTRFRVLANMAHSPQEGRNLFAKLTKVTDRFLDV 206

Query: 201 QLHFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFKRLADQ 243
            L ++G IP DE +R+A  + R V EAFP + A+LAFK +A +
Sbjct: 207 ALQYVGVIPYDESVRKAVQKQRAVYEAFPRSKASLAFKAVAQK 249


>RSp1391 [D] COG0455 ATPases involved in chromosome partitioning Rso
           Ralstonia solanacearum
          Length = 255

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 92  KNVSASTHPQASRLAQIFDGLTEESDITLINGELNDDELLPVPAMEMGEIVVHMSTSPTS 151
           +N +  + P    L  + +    E+D+TL+        L  V A    ++++    +P  
Sbjct: 50  RNTAVVSAPTILALDGVLEQHDAEADVTLVAAHFGIRALSTV-AQACDDVLLIFPEAPEG 108

Query: 152 IKAAYVLLKG---LSDKLGRRPFNLLVSGGSDAEAQM-VYANMAQAANRYLAAQLHFMGS 207
           IKAAY LLK    L    G      +VSG    ++ + V+ N++    +YL  ++ F G 
Sbjct: 109 IKAAYTLLKKTAVLQGSKGGSGIRTVVSGARSVDSAVRVFGNLSNTVGQYLNTRIDFAGY 168

Query: 208 IPADEHIRRASGQGRTVLEAFPLAGATLAFKRLADQF 244
           IP D HI  A   G+ V+ AFP + + +AF++LA++ 
Sbjct: 169 IPDDRHIELALSLGKPVVSAFPASPSAMAFRQLAEEM 205


>VC2067 [D] COG0455 ATPases involved in chromosome partitioning Vch Vibrio
           cholerae
          Length = 313

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 90/177 (50%), Gaps = 3/177 (1%)

Query: 70  ERHLDEAVRMVPEGFAL--ARLSRKNVSASTHPQASRLAQIFDGLTEESDITLINGELND 127
           E  L +A+   P G  +  A    ++++  +H Q   L + F  L +E DI LI+     
Sbjct: 103 ECELKDAIVEGPHGIRIIPATSGTQSMTELSHAQHVGLIRAFGTLEDEMDILLIDTAAGI 162

Query: 128 DELLPVPAMEMGEIVVHMSTSPTSIKAAYVLLKGLSDKLGRRPFNLLVSG-GSDAEAQMV 186
            +++   +    ++VV +   PTSI  AY L+K LS +   + F ++ +   S  E + +
Sbjct: 163 SDMVVSFSRAAQDVVVVVCDEPTSITDAYALIKLLSKEHQVQRFKIVANMVRSYREGREL 222

Query: 187 YANMAQAANRYLAAQLHFMGSIPADEHIRRASGQGRTVLEAFPLAGATLAFKRLADQ 243
           +A +     R+L   L  +  IP D+++R+A  + + V++A+P + A LA   LA++
Sbjct: 223 FAKLTLVTERFLNVSLELVACIPLDDNVRQAVKRQKIVVDAYPRSPAALAISSLANK 279