BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0067.p (190 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp0349 [N] COG1706 Flagellar basal-body P-ring protein Rso Rals... 202 4e-52 flgI [N] COG1706 Flagellar basal-body P-ring protein Eco Escheri... 184 8e-47 ZflgI [N] COG1706 Flagellar basal-body P-ring protein EcZ Escher... 184 1e-46 ECs1458 [N] COG1706 Flagellar basal-body P-ring protein Ecs Esch... 184 1e-46 STM1181 [N] COG1706 Flagellar basal-body P-ring protein Sty Salm... 183 2e-46 >RSp0349 [N] COG1706 Flagellar basal-body P-ring protein Rso Ralstonia solanacearum Length = 369 Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 100/190 (52%), Positives = 136/190 (71%) Query: 1 VPSALGQGDTVNLELNDNDFSTASRVVEAVNKRFGFDTAMAQDGRVIRIRAPIGSGDRVA 60 V + +G+ ++ L+ DF T +V A+NK+FG DTA A DGR + +RAP + DRV Sbjct: 180 VQATVGEAGSIQLDTGTTDFGTVQNIVNAINKQFGADTAEAADGRTVNVRAPALAADRVG 239 Query: 61 FLGALENIDVIPSRVQAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINAENSISQPG 120 F+ L+NI+V P++ A+V++NARTGSVVMNQ V L+ CAV+HGNLSV I+ E +SQP Sbjct: 240 FVAKLQNIEVTPAQAAARVVVNARTGSVVMNQQVKLEPCAVAHGNLSVTISTEPVVSQPA 299 Query: 121 ALSGGQTAANQNAQISISSAPGKVMYLKGGASLAEVVKALNAIGATPQDLLAILQAMKAA 180 S GQT A + I + G ++ +KGG +LA+VVKA+NAIGA PQDL++ILQAMKAA Sbjct: 300 PFSQGQTVAGARSNIEVKQQGGSLINVKGGTNLADVVKAINAIGANPQDLISILQAMKAA 359 Query: 181 GSLRAELEII 190 +LRA+LEII Sbjct: 360 NALRADLEII 369 >flgI [N] COG1706 Flagellar basal-body P-ring protein Eco Escherichia coli K12 Length = 365 Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 92/191 (48%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 VPSALGQGDTVNLELNDNDFSTASRVVEAVNKRFGFDTAMAQDGRVIRIRAPIGSGDRVA 60 +PS G G+T+NL+LND DFS A ++ + +N+ G+ +A A D R I++R P G+ +V Sbjct: 175 LPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVR 234 Query: 61 FLGALENIDVIPSRVQAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINAENSISQPG 120 FL ++N+ V + AKV++N+RTGSVVMN+ VTLD+CAV+ GNLSV +N + ++SQP Sbjct: 235 FLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPD 294 Query: 121 A-LSGGQTAANQNAQISISSAPGKVMYLKGGASLAEVVKALNAIGATPQDLLAILQAMKA 179 GGQT QI + + G + ++ ASL VV+ALNA+GATP DL++ILQ+M++ Sbjct: 295 TPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQS 354 Query: 180 AGSLRAELEII 190 AG LRA+LEII Sbjct: 355 AGCLRAKLEII 365 >ZflgI [N] COG1706 Flagellar basal-body P-ring protein EcZ Escherichia coli O157:H7 EDL933 Length = 365 Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/191 (47%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 VPSALGQGDTVNLELNDNDFSTASRVVEAVNKRFGFDTAMAQDGRVIRIRAPIGSGDRVA 60 +PS G G+T+NL+LND DFS A ++ + +N+ G+ +A A D R I++R P G+ +V Sbjct: 175 LPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVR 234 Query: 61 FLGALENIDVIPSRVQAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINAENSISQPG 120 FL ++N+ V + AKV++N+RTGSVVMN+ VTLD+CA++ GNLSV +N + ++SQP Sbjct: 235 FLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAIAQGNLSVTVNRQANVSQPD 294 Query: 121 A-LSGGQTAANQNAQISISSAPGKVMYLKGGASLAEVVKALNAIGATPQDLLAILQAMKA 179 GGQT QI + + G + ++ ASL VV+ALNA+GATP DL++ILQ+M++ Sbjct: 295 TPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQS 354 Query: 180 AGSLRAELEII 190 AG LRA+LEII Sbjct: 355 AGCLRAKLEII 365 >ECs1458 [N] COG1706 Flagellar basal-body P-ring protein Ecs Escherichia coli O157:H7 Length = 365 Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/191 (47%), Positives = 134/191 (70%), Gaps = 1/191 (0%) Query: 1 VPSALGQGDTVNLELNDNDFSTASRVVEAVNKRFGFDTAMAQDGRVIRIRAPIGSGDRVA 60 +PS G G+T+NL+LND DFS A ++ + +N+ G+ +A A D R I++R P G+ +V Sbjct: 175 LPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVR 234 Query: 61 FLGALENIDVIPSRVQAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINAENSISQPG 120 FL ++N+ V + AKV++N+RTGSVVMN+ VTLD+CA++ GNLSV +N + ++SQP Sbjct: 235 FLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAIAQGNLSVTVNRQANVSQPD 294 Query: 121 A-LSGGQTAANQNAQISISSAPGKVMYLKGGASLAEVVKALNAIGATPQDLLAILQAMKA 179 GGQT QI + + G + ++ ASL VV+ALNA+GATP DL++ILQ+M++ Sbjct: 295 TPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQS 354 Query: 180 AGSLRAELEII 190 AG LRA+LEII Sbjct: 355 AGCLRAKLEII 365 >STM1181 [N] COG1706 Flagellar basal-body P-ring protein Sty Salmonella typhimurium LT2 Length = 365 Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 88/191 (46%), Positives = 136/191 (71%), Gaps = 1/191 (0%) Query: 1 VPSALGQGDTVNLELNDNDFSTASRVVEAVNKRFGFDTAMAQDGRVIRIRAPIGSGDRVA 60 +P+ G G+T+NL+LND DF+ A ++ +A+N+ G+ +A A D R +++R P G+ +V Sbjct: 175 LPTQFGAGNTINLQLNDEDFTMAQQITDAINRARGYGSATALDARTVQVRVPSGNSSQVR 234 Query: 61 FLGALENIDVIPSRVQAKVILNARTGSVVMNQAVTLDTCAVSHGNLSVVINAENSISQPG 120 FL ++N++V + AKV++N+RTGSVVMN+ VTLD+CAV+ GNLSV +N + +++QP Sbjct: 235 FLADIQNMEVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQLNVNQPN 294 Query: 121 A-LSGGQTAANQNAQISISSAPGKVMYLKGGASLAEVVKALNAIGATPQDLLAILQAMKA 179 GGQT QI + + G + ++ A+L VV+ALNA+GATP DL++ILQ+M++ Sbjct: 295 TPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSANLNSVVRALNALGATPMDLMSILQSMQS 354 Query: 180 AGSLRAELEII 190 AG LRA+LEII Sbjct: 355 AGCLRAKLEII 365