BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0066.p         (316 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0350_2 [NU] COG1705 Muramidase (flagellum-specific) Rso Ralst...   188   1e-47
ECs1459_2 [NU] COG1705 Muramidase (flagellum-specific) Ecs Esche...   142   1e-33
ZflgJ_2 [NU] COG1705 Muramidase (flagellum-specific) EcZ Escheri...   142   1e-33
flgJ_2 [NU] COG1705 Muramidase (flagellum-specific) Eco Escheric...   142   1e-33
YPO1807_2 [NU] COG1705 Muramidase (flagellum-specific) Ype Yersi...   140   3e-33

>RSp0350_2 [NU] COG1705 Muramidase (flagellum-specific) Rso Ralstonia
           solanacearum
          Length = 152

 Score =  188 bits (478), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 2/148 (1%)

Query: 167 VEAFQNRLQADAEAASRITGIPAKFMLAQAALETGWGKKEIRARDGSSAHNLFGIKATGN 226
           + +F N+L   A  AS+ TGIPA FM+  AALE+GWG++EIRA+DG+S+HNLFGIKA G+
Sbjct: 3   MSSFYNKLIDHATQASQETGIPASFMIGHAALESGWGRREIRAKDGTSSHNLFGIKAGGS 62

Query: 227 WTGKTVDATTIEYVNGVAQRKVEKFRAYDSYSEAFQDYAKLLRSNPRYEKVLA--NAQDA 284
           WTG T +  T EYV GVA +  EKFRAY SY+EAF+DYA LL SNPRY  V+A    +DA
Sbjct: 63  WTGPTTEVMTTEYVGGVAHKVKEKFRAYGSYAEAFKDYANLLSSNPRYSNVVAAGAGKDA 122

Query: 285 HGFAYGLQRAGYATDPHYAEKLSRIIRQ 312
             FA GLQRAGYATDP+YA K+  ++RQ
Sbjct: 123 ASFARGLQRAGYATDPNYANKIMAVLRQ 150


>ECs1459_2 [NU] COG1705 Muramidase (flagellum-specific) Ecs Escherichia coli
           O157:H7
          Length = 146

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 186 GIPAKFMLAQAALETGWGKKEIRARDGSSAHNLFGIKATGNWTGKTVDATTIEYVNGVAQ 245
           G+P   +LAQAALE+GWG+++IR  +G  ++NLFG+KA+GNW G   + TT EY NG A+
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 246 RKVEKFRAYDSYSEAFQDYAKLLRSNPRYEKVLANAQDAHGFAYGLQRAGYATDPHYAEK 305
           +   KFR Y SY EA  DY  LL  NPRY  V   A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 306 LSRIIRQ 312
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>ZflgJ_2 [NU] COG1705 Muramidase (flagellum-specific) EcZ Escherichia coli
           O157:H7 EDL933
          Length = 146

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 186 GIPAKFMLAQAALETGWGKKEIRARDGSSAHNLFGIKATGNWTGKTVDATTIEYVNGVAQ 245
           G+P   +LAQAALE+GWG+++IR  +G  ++NLFG+KA+GNW G   + TT EY NG A+
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 246 RKVEKFRAYDSYSEAFQDYAKLLRSNPRYEKVLANAQDAHGFAYGLQRAGYATDPHYAEK 305
           +   KFR Y SY EA  DY  LL  NPRY  V   A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 306 LSRIIRQ 312
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>flgJ_2 [NU] COG1705 Muramidase (flagellum-specific) Eco Escherichia coli
           K12
          Length = 146

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 1/127 (0%)

Query: 186 GIPAKFMLAQAALETGWGKKEIRARDGSSAHNLFGIKATGNWTGKTVDATTIEYVNGVAQ 245
           G+P   +LAQAALE+GWG+++IR  +G  ++NLFG+KA+GNW G   + TT EY NG A+
Sbjct: 1   GVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAK 60

Query: 246 RKVEKFRAYDSYSEAFQDYAKLLRSNPRYEKVLANAQDAHGFAYGLQRAGYATDPHYAEK 305
           +   KFR Y SY EA  DY  LL  NPRY  V   A    G A  LQ AGYATDPHYA K
Sbjct: 61  KVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQG-AQALQDAGYATDPHYARK 119

Query: 306 LSRIIRQ 312
           L+ +I+Q
Sbjct: 120 LTNMIQQ 126


>YPO1807_2 [NU] COG1705 Muramidase (flagellum-specific) Ype Yersinia pestis
          Length = 147

 Score =  140 bits (354), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 87/127 (68%), Gaps = 1/127 (0%)

Query: 186 GIPAKFMLAQAALETGWGKKEIRARDGSSAHNLFGIKATGNWTGKTVDATTIEYVNGVAQ 245
           GIP + ++AQAALE+GWG++EI   DG S++N+FGIKA  +W G   + TT EY  GVA+
Sbjct: 1   GIPHQLIMAQAALESGWGQREIPTADGKSSYNVFGIKAGSSWNGPVSEITTTEYEQGVAK 60

Query: 246 RKVEKFRAYDSYSEAFQDYAKLLRSNPRYEKVLANAQDAHGFAYGLQRAGYATDPHYAEK 305
           +   +FR Y SY EA  DY KLL  NPRY  V A AQ     A+ LQ+AGYATDP YA+K
Sbjct: 61  KTKARFRVYGSYVEAVSDYVKLLTQNPRYAHVAA-AQSPEQGAHALQKAGYATDPQYAQK 119

Query: 306 LSRIIRQ 312
           L  +I+Q
Sbjct: 120 LVSVIQQ 126