BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0021.p         (123 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1323 [GER] COG0697 Permeases of the drug/metabolite transport...   153   8e-38
BMEII0439 [GER] COG0697 Permeases of the drug/metabolite transpo...    68   5e-12
mll1264 [GER] COG0697 Permeases of the drug/metabolite transport...    63   1e-10

>RSc1323 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Rso Ralstonia solanacearum
          Length = 123

 Score =  153 bits (387), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 97/123 (78%)

Query: 1   MNITTFGFIFVGICLNAVAQLLLKAGTNAVGAIHLTAENWFATGIKLATQLPIIGGLTCY 60
           MN+ TFG I  G+ LNA AQLLLKAG NA+G    + EN    GIKLATQLPIIGGL CY
Sbjct: 1   MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLACY 60

Query: 61  VISVGVWIIGLSRVDVTIAYPLLSLGYIINAVGAWYFLGEVVSAQRLLAIGVIIVGVILL 120
           VISV VWI+GLSRVDVTIAYP+LSLGY++NA+ AWY  GEV+S QRL+ I +I++GV +L
Sbjct: 61  VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLSLQRLIGITIILIGVFVL 120

Query: 121 TRS 123
            RS
Sbjct: 121 ARS 123


>BMEII0439 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Bme Brucella melitensis
          Length = 159

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 62/116 (53%)

Query: 8   FIFVGICLNAVAQLLLKAGTNAVGAIHLTAENWFATGIKLATQLPIIGGLTCYVISVGVW 67
           FI   +  NA AQL+LK G   +G I  +A+       ++     +  GL  +VIS+   
Sbjct: 26  FILFTVMTNAAAQLMLKYGMITLGPISFSADTLIQRIFQIVFNPWVFAGLFTFVISMASH 85

Query: 68  IIGLSRVDVTIAYPLLSLGYIINAVGAWYFLGEVVSAQRLLAIGVIIVGVILLTRS 123
           +  LS+VD++ AYP LSL Y+  A+ AW    E + A ++  I  I +G IL+ +S
Sbjct: 86  LYVLSKVDLSFAYPFLSLAYVAVALCAWLLFKEELGAYKIAGIAFICIGTILIAQS 141


>mll1264 [GER] COG0697 Permeases of the drug/metabolite transporter (DMT)
           superfamily Mlo Mesorhizobium loti
          Length = 149

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 63/116 (54%)

Query: 8   FIFVGICLNAVAQLLLKAGTNAVGAIHLTAENWFATGIKLATQLPIIGGLTCYVISVGVW 67
           FI   +  NA AQL+LK G  ++G I     N     +++     +  GL  +VIS+   
Sbjct: 11  FILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGLCTFVISMASH 70

Query: 68  IIGLSRVDVTIAYPLLSLGYIINAVGAWYFLGEVVSAQRLLAIGVIIVGVILLTRS 123
           +  LS+V+++ AYP LSL Y+  A+ A++   E ++  R+  I  I VG +L+ +S
Sbjct: 71  LYVLSKVELSFAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGTVLIAQS 126