BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0026.p (302 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 255 1e-67 RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 231 2e-60 PA2594 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 214 2e-55 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 206 7e-53 RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 205 1e-52 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 130/283 (45%), Positives = 182/283 (64%), Gaps = 1/283 (0%) Query: 15 TLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNADAIDFGHAADT 74 TLRIGYQK+ TL +LK G LEK LA G KV+W EF GPQL E LN +IDFG +T Sbjct: 31 TLRIGYQKYGTLVLLKARGTLEKRLAEDGVKVQWTEFPGGPQLLEGLNVGSIDFGVTGET 90 Query: 75 PSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGRGWNVQYLLVR 134 P VFA A+G + +Y+A E P P I + +DSPIRS+ ELKG+KVAL +G NV YLLVR Sbjct: 91 PPVFAQAAGADLLYVAYEPPAPTSEAILLPKDSPIRSVAELKGRKVALNKGSNVHYLLVR 150 Query: 135 ALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTRPRILRDGTGL 194 ALE+AGL Y+DI PVYL AD RA F+ +VDA +WDP+ A E R+L DG L Sbjct: 151 ALEQAGLKYSDIQPVYLP-PADARAAFERHSVDAWVIWDPYQAAAEKQLSARVLVDGREL 209 Query: 195 SNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQLGVDPKVLRLA 254 +N F+LAT +A ++ ++ L E+++ +W++A+PQ+ + +AP LG+ + A Sbjct: 210 VDNHQFYLATRTYAQRHPQVLDKLVDEIREVGDWSRANPQQVTEQVAPLLGLPADITLTA 269 Query: 255 TERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVY 297 +R+ Y I +++ QQ+I + F +L LI + +KD ++ Sbjct: 270 VKRQGYGAQLITPAVVEAQQKIADTFTQLKLIPKPLSIKDVIW 312 >RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 334 Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 171/283 (60%), Gaps = 1/283 (0%) Query: 15 TLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNADAIDFGHAADT 74 T+RIG+QK L +LK G L+ LA LG++++W EF AGPQL EALNA +IDFG+ Sbjct: 43 TVRIGFQKAGLLAVLKAQGALDTPLAELGYRIEWKEFPAGPQLLEALNAGSIDFGYTGAP 102 Query: 75 PSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVALGRGWNVQYLLVR 134 P+VFA A+G VY+ AE +FV SP R + +LKGK++AL +G + YLLV+ Sbjct: 103 PAVFAQAAGARFVYVGAEPGASANEALFVRDGSPARGVADLKGKRIALQKGSSSNYLLVQ 162 Query: 135 ALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEISTRPRILRDGTGL 194 L+ AGL+ DI P+YL A+ RA F+SG VDA +WDP+ A + + + R L D TGL Sbjct: 163 LLKRAGLTVQDIQPIYLPP-AEARAAFESGAVDAWVVWDPYYALAQTALKVRTLADYTGL 221 Query: 195 SNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAPQLGVDPKVLRLA 254 + F+ ATP F + + + A+L+ T W HP+ETA LL+P+LG+ P V+ Sbjct: 222 PSPFNFYEATPGFVQAHPRAVNAILAQLRTTGLWVNRHPRETAALLSPKLGIAPPVVETW 281 Query: 255 TERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVY 297 R Y PI +I QQQ+ + F++ LI V V+ V+ Sbjct: 282 LRRVPYGVTPITPEVIAAQQQVADLFHQQKLIPRPVSVQGAVW 324 >PA2594 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 319 Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 113/292 (38%), Positives = 173/292 (59%), Gaps = 4/292 (1%) Query: 5 AGWSNAAEERTLRIGYQKFNTL-NILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALNA 63 +G A E LRIG+QK +TL +++ G E+ LA G +V W EF +G L E+LN Sbjct: 20 SGIGGAQAEEVLRIGFQKSSTLLTLIRSQGTFERELARQGIRVSWHEFPSGLPLLESLNV 79 Query: 64 DAIDF-GHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVAL 122 +D ADT VFA A+G Y A E P P I V + SP++S+ ELKG+++A+ Sbjct: 80 GNVDLSADVADTVPVFAQAAGARLTYFARETPSPAAQAILVGEHSPLKSLAELKGRRIAV 139 Query: 123 GRGWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEIS 182 + YLL+ AL AGL ++DI P YL+ AD RA F++G VDA WDP++A + Sbjct: 140 TKAAGSHYLLIAALASAGLEFSDIQPAYLT-PADGRAAFENGKVDAWVTWDPYVASAQRQ 198 Query: 183 TRPRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAP 242 R R+L DG GL++ + ++LA+ +A ++ +++ +FAEL++T W ++HP + A +L P Sbjct: 199 QRARVLADGQGLASYQRYYLASSDYARKHPEVLQQVFAELQRTGRWLKSHPADAAKVLGP 258 Query: 243 QLG-VDPKVLRLATERRDYTTVPINAGIIQEQQQIVEAFYKLGLIKNQVQVK 293 G +D + A RR Y P++A + EQQ+I +AF+ GL+ V + Sbjct: 259 LWGNLDAATVEQANARRSYDVQPVSADGLDEQQRIADAFHAQGLLPKPVDAR 310 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 113/300 (37%), Positives = 177/300 (59%), Gaps = 5/300 (1%) Query: 1 LVGAAGWSNAAEE--RTLRIGYQKFNTLNILKGTGNLEKALAPLGWKVKWFEFAAGPQLT 58 L+ + ++ AAE LRIGYQK + +L + L + P K+ W EF AGPQ+ Sbjct: 26 LLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPES-KISWVEFPAGPQML 84 Query: 59 EALNADAIDFGHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGK 118 EALN +ID G D P +FA A+G + VY+ E P PK I VA++SPI+++ +LKG Sbjct: 85 EALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGH 144 Query: 119 KVALGRGWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAG 178 KVA +G + LL+RAL +AGL + DI P YL+ AD RA FQ GNVDA +WDP+ + Sbjct: 145 KVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLT-PADARAAFQQGNVDAWAIWDPYYSA 203 Query: 179 QEISTRPRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETAD 238 + R+L+DGT L+ +F+LA +A++N I+ + A + + T++ +++ Sbjct: 204 ALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIA 263 Query: 239 LLAPQLGVDPKVLRLATERRDYTTV-PINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVY 297 LLA +G+ V+ + R TT+ P+NA + QQQ + FY+ L+ +V ++ +++ Sbjct: 264 LLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIW 323 >RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 336 Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 119/296 (40%), Positives = 172/296 (58%), Gaps = 5/296 (1%) Query: 4 AAGWSNAAEERTLRIGYQKFNT-LNILKGTGNLEKALAPLGWKVKWFEFAAGPQLTEALN 62 AA N LRIG+QK L I+K + LE+ +V W EF AGPQ EAL+ Sbjct: 32 AATLPNIVPPAQLRIGFQKSAVNLVIVKESRALEQRFP--DTRVHWLEFPAGPQQLEALS 89 Query: 63 ADAIDFGHAADTPSVFANASGVNAVYLAAEQPYPKGIGIFVAQDSPIRSIKELKGKKVAL 122 A ++D DTP VFA A+G + Y+ E P P I V + S ++++ +LKGK+VAL Sbjct: 90 AGSLDVAITGDTPPVFAQAAGRDLRYIGVEPPKPDSSAIVVPRGSALQALADLKGKRVAL 149 Query: 123 GRGWNVQYLLVRALEEAGLSYNDIVPVYLSNAADVRATFQSGNVDAAGLWDPFLAGQEIS 182 +G + +L+V L + GL++ DI PVYL+ AD RA F+ G+VDA G+WDP+ A E++ Sbjct: 150 QKGSSAHFLVVSGLRKGGLTFADIQPVYLTP-ADARAAFERGSVDAWGIWDPYYAATELA 208 Query: 183 TRPRILRDGTGLSNNRTFHLATPKFADQNKNIIRVLFAELKKTNNWTQAHPQETADLLAP 242 PR+L G GLS+N TF+ A FA+Q+ + I LFAEL + + Q + +E A +A Sbjct: 209 IGPRVLATGRGLSSNNTFYFAPRAFAEQHGDTIAALFAELARADRLVQQNRKEAAQRIAE 268 Query: 243 QLGVDPKVLRLATERRDYTTV-PINAGIIQEQQQIVEAFYKLGLIKNQVQVKDKVY 297 G+ + L RR + V P+ I EQQ++ +AF+ LGLI V+ D V+ Sbjct: 269 FSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHGLGLIPRPVRPADLVW 324