BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0034.p (310 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2261 [G] COG0524 Sugar kinases, ribokinase family Pae Pseudomo... 223 4e-58 BS_kdgK [G] COG0524 Sugar kinases, ribokinase family Bsu Bacillu... 221 2e-57 CAC0395 [G] COG0524 Sugar kinases, ribokinase family Cac Clostri... 172 8e-43 L0021 [G] COG0524 Sugar kinases, ribokinase family Lla Lactococc... 161 1e-39 BH3724 [G] COG0524 Sugar kinases, ribokinase family Bha Bacillus... 155 8e-38 >PA2261 [G] COG0524 Sugar kinases, ribokinase family Pae Pseudomonas aeruginosa Length = 316 Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 108/213 (50%), Positives = 148/213 (69%), Gaps = 1/213 (0%) Query: 4 QLDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDS 63 +++ +GE +A+FVA++ G+ VE++ +R+AGA++NVAIGLARLG V W+SRVG+DS Sbjct: 3 DFEILCFGETMAMFVAEQPGELDRVEQFGKRIAGADSNVAIGLARLGFAVAWLSRVGDDS 62 Query: 64 FGRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDF 123 GRF+ + +EG+D V +D + T Q+K++ VDGADP +EY+R+GSAAS L Sbjct: 63 LGRFVLDSLTREGLDCRFVEVDAQAPTGFQMKSREVDGADPRVEYFRRGSAASRLGLAHI 122 Query: 124 DEAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMA 183 E GARHLHATGI ALS S +H + MR +G ++SFDPNLRP LWPS+ M Sbjct: 123 REEML-GARHLHATGIPPALSASACELSHELMRRMRGKGASLSFDPNLRPSLWPSERRMI 181 Query: 184 QKLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 ++N LA A WVLPGL EG++L+G EP DIA Sbjct: 182 AEINALAAHAHWVLPGLEEGRLLSGWQEPADIA 214 >BS_kdgK [G] COG0524 Sugar kinases, ribokinase family Bsu Bacillus subtilis Length = 324 Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/214 (50%), Positives = 144/214 (67%), Gaps = 2/214 (0%) Query: 4 QLDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDS 63 +LD VT+GE++A+F A+E G +V +++ LAGAE+NVA GLARLG ++GW+S+VGND Sbjct: 2 KLDAVTFGESMAMFYANEYGGLHEVSTFSKGLAGAESNVACGLARLGFRMGWMSKVGNDQ 61 Query: 64 FGRFICKRVAQEGVDVSQVA-IDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVD 122 G FI + + +EGVDVS+V E T + LK+K +G DP + YYRK SAAS L+ + Sbjct: 62 LGTFILQELKKEGVDVSRVIRSQDENPTGLLLKSKVKEG-DPQVTYYRKNSAASTLTTAE 120 Query: 123 FDEAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVM 182 + YF A HLH TGI ALS F +H ++ MR GKTISFDPN+RP LWP Q M Sbjct: 121 YPRDYFQCAGHLHVTGIPPALSAEMKDFTYHVMNDMRNAGKTISFDPNVRPSLWPDQATM 180 Query: 183 AQKLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 +N+LA ADW PG++EG++LTG P IA Sbjct: 181 VHTINDLAGLADWFFPGIAEGELLTGEKTPEGIA 214 >CAC0395 [G] COG0524 Sugar kinases, ribokinase family Cac Clostridium acetobutylicum Length = 315 Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 135/215 (62%), Gaps = 5/215 (2%) Query: 6 DVVTYGEALALFVADEVGDF----ADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGN 61 + +T GE LALF A+ + ++V+ + + LAGAE NV++G++RLG +++++G Sbjct: 3 EFITIGEPLALFAAEGESEIDKRISEVDHFKKFLAGAEVNVSVGVSRLGHSAQYITKLGE 62 Query: 62 DSFGRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQV 121 D FG FI +R+ +E V ++ + T QLK+K +G DP+I Y+RK SAA++ S Sbjct: 63 DPFGEFIRRRLNEENVGTDYISSTNKKFTGFQLKSKVSEG-DPSIFYFRKNSAAANFSVE 121 Query: 122 DFDEAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEV 181 D ++ G +H+H TGI ALS ST + L+ + R T +FD NLRP LW S+E Sbjct: 122 DLNKVNLDGVKHVHITGIFPALSESTKEATYKLLELAKERNITTTFDTNLRPQLWNSKED 181 Query: 182 MAQKLNELAFKADWVLPGLSEGKILTGRSEPRDIA 216 M +N++AFK+D +LPG++EG +L G +P +IA Sbjct: 182 MISTINDIAFKSDILLPGINEGLVLMGSDKPEEIA 216 >L0021 [G] COG0524 Sugar kinases, ribokinase family Lla Lactococcus lactis Length = 316 Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 4/214 (1%) Query: 6 DVVTYGEALALFVADEVGDFADV-EKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 + +T GE L + ++ DV E +++ LAGAE NVAIGL+RLG K ++S+VG DSF Sbjct: 3 EFITLGEPLVVLASENQDISLDVAEHFSKYLAGAELNVAIGLSRLGHKGIYLSKVGEDSF 62 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 G FI + V + ++ + + DK + T LK K +G DP ++YYRK SAA++LS + Sbjct: 63 GNFIIESVKKAEIETTYLTKDKNYSTGFYLKQKVSEG-DPKVDYYRKNSAAANLSIAELK 121 Query: 125 EAYFGGARHLHATGIAAALSPSTM-AFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMA 183 G + H +GI ALS +++ F A TI FDPNLRP+LW +QE M Sbjct: 122 ALDLSGIKIAHLSGIFPALSETSLKTFQAFNQKLNEADILTI-FDPNLRPVLWDNQEKMI 180 Query: 184 QKLNELAFKADWVLPGLSEGKILTGRSEPRDIAR 217 + +N+LA ++ +LPG++EG+ILTG SEP IA Sbjct: 181 RTINDLAKQSQIILPGINEGEILTGSSEPEKIAN 214 >BH3724 [G] COG0524 Sugar kinases, ribokinase family Bha Bacillus halodurans Length = 317 Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 89/207 (42%), Positives = 119/207 (57%), Gaps = 1/207 (0%) Query: 5 LDVVTYGEALALFVADEVGDFADVEKYTRRLAGAETNVAIGLARLGLKVGWVSRVGNDSF 64 +DVVT+GE + +F E+G V+++ + + GAE+NVAIG+A+LG VGWVS+VGND Sbjct: 1 MDVVTFGETMVVFEPVEMGALRYVDRFKKGVGGAESNVAIGVAKLGHSVGWVSKVGNDEL 60 Query: 65 GRFICKRVAQEGVDVSQVAIDKEFRTAIQLKAKAVDGADPAIEYYRKGSAASHLSQVDFD 124 G+++ + EGVD SQV +D T + LK K D + + YYR GSAAS L D + Sbjct: 61 GKYVISAIRGEGVDTSQVVLDDGAPTGLYLKEKLRDDFN-RVYYYRAGSAASRLGVEDIN 119 Query: 125 EAYFGGARHLHATGIAAALSPSTMAFAHHALDFMRARGKTISFDPNLRPMLWPSQEVMAQ 184 AY A+ +H TGI LS S H LDF + G SFDPNLR L + + Sbjct: 120 WAYMKQAKIIHITGITPLLSDSCYELCHAVLDFAKENGIFASFDPNLRMKLLANVPDGKE 179 Query: 185 KLNELAFKADWVLPGLSEGKILTGRSE 211 +L LA KAD V+PG E L E Sbjct: 180 RLLALASKADLVMPGRDEAAFLFDTDE 206