BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0147.p         (228 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20079 [Q] COG2931 RTX toxins and related Ca2+-binding protein...    67   4e-11
SMb21543 [Q] COG2931 RTX toxins and related Ca2+-binding protein...    61   2e-09

>SMb20079 [Q] COG2931 RTX toxins and related Ca2+-binding proteins Sme
           Sinorhizobium meliloti
          Length = 1072

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 37/206 (17%)

Query: 15  LPAEIRAXIQNVIGSAFNDTFVGNIDANSFDG--------GSGGQDTVSYANSAQGV--- 63
           +  ++ A I+N++G +  DT +G+  AN+F G        G GG DT  +++  Q V   
Sbjct: 321 IAEDLIAKIENIVGGSGGDTIIGDAAANAFRGGLGADVLDGGGGSDTADFSDKVQSVVLA 380

Query: 64  ---SVNFVSGRGVGGDADNDTYSHIQNVIGSAYDDVFVAGIDSRIFNGGSG--------G 112
              +V+ ++   VGG A+ DT  +I+N+ G + +D F     +  F GG G        G
Sbjct: 381 LNGAVDAIA--AVGGTAE-DTVRNIENITGGSGNDQFTGDAAANTFRGGLGADVLDGGDG 437

Query: 113 SDTVNYGASTGGIIANMVTMTGSG-------GYAQNNTYVNIQNIVGSSSSDIFISGAGA 165
           SDT +YG  T   ++ +VT+ G+        G A+ ++  NI+NI+G S +D+       
Sbjct: 438 SDTADYGDKT---VSVVVTLAGANPTTAFVDGMAE-DSLRNIENIIGGSGNDVLAGDGFQ 493

Query: 166 NHFDGGSGGSDTVSYVSSNAGVVVSL 191
           N  DGG+ G+D   Y +S  G+ V L
Sbjct: 494 NVLDGGA-GTDMADYSASAKGIAVML 518



 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 105/225 (46%), Gaps = 48/225 (21%)

Query: 23  IQNVIGSAFNDTFVGNIDANSFDGGSGGQDTVSYANSAQGVSVNFVSG----RGVGGDAD 78
           I+N+IG + ND   G+   N  DGG+G  D   Y+ SA+G++V  ++G    + + G A 
Sbjct: 475 IENIIGGSGNDVLAGDGFQNVLDGGAG-TDMADYSASAKGIAV-MLNGANDAKVIVGSAA 532

Query: 79  NDTYSHIQNVIGSAYDDVFVAGIDSRIFNGGS--------GGSDTVNYGASTGGIIANMV 130
            DT  +I+NV GSA+ DV      + I  GGS        GG D ++ GA T    A+  
Sbjct: 533 EDTLRNIENVTGSAFADVITGDAQANILLGGSGSDILKGDGGQDVIDGGAGTD--TADFS 590

Query: 131 TMTGS---------------GGYAQNNTYVNIQNIVGSSSSDIFI---------SGAGAN 166
             T +               GG A+ +T  NI++I G   +D+            GAGA+
Sbjct: 591 EKTAAVVLALAGAANAIATVGGLAE-DTVRNIESIFGGIGADVLTGDGNSNTIRGGAGAD 649

Query: 167 HFDGGSGGSDTVSYVSSNAGVVVSLFDGSAS-----GGYINDRDR 206
             DGG+ G DTV Y      V V+L DG+       GG I D  R
Sbjct: 650 SLDGGA-GVDTVDYRDKTKSVAVTL-DGATPVTVKVGGVIEDTIR 692


>SMb21543 [Q] COG2931 RTX toxins and related Ca2+-binding proteins Sme
           Sinorhizobium meliloti
          Length = 1112

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 37/183 (20%)

Query: 26  VIGSAFNDTFVGNIDANSFDGGSGGQDTVSYANSAQGVSVNFVSGRGVGGDAD------- 78
           + G A NDT +G    +  DGGSG  DTV YA S  GV+++  +G   GGD D       
Sbjct: 612 LYGEAGNDTVIGGAGQDYLDGGSG-IDTVVYAGSPDGVTIDLANGTASGGDGDGPVQIVG 670

Query: 79  ------NDTYSHIQNVIGSAYDDVFVAGIDSRIFNGGS-----------------GGSDT 115
                 +D     +N  GS++DD  +    +   +GG+                  GSDT
Sbjct: 671 RGAVIRHDILVGFENAAGSSFDDHLIGNALANELSGGAGDDTLTGGGGADRLNGGAGSDT 730

Query: 116 VNYGASTGGIIANMVTMTGSGGYAQNNTYVNIQNIVGSSSSDIFISGAGANHFDGGSGGS 175
            +Y  +T G     V ++ +GG +  +TYV+I+N+ GS   D  ++G GA +   G GG+
Sbjct: 731 ADYADATSG-----VRLSLAGGRSGGDTYVSIENLAGSGFGD-RLTGNGAANVLTGQGGN 784

Query: 176 DTV 178
           DT+
Sbjct: 785 DTI 787