BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0125.p         (234 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA2832 [QR] COG0500 SAM-dependent methyltransferases Pae Pseudom...   194   1e-49
VC1226 [QR] COG0500 SAM-dependent methyltransferases Vch Vibrio ...   147   3e-35

>PA2832 [QR] COG0500 SAM-dependent methyltransferases Pae Pseudomonas
           aeruginosa
          Length = 218

 Score =  194 bits (494), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/217 (46%), Positives = 134/217 (61%)

Query: 16  MEAEFWLERWRDGRTHFHQTRVTPLLQKYWPALALPQGSQVLVPLAGKSLDMVWLASQGH 75
           M+A+FW  RW + +  FH   + P L ++   L L  G Q+LVPL GK+LD+ WLA+QG 
Sbjct: 1   MQADFWHARWANNQIGFHLDEINPYLMRHLSRLRLQAGEQILVPLCGKTLDLAWLAAQGL 60

Query: 76  RVLGVELSQLAVEQFFDENRLQPQIRESAYGRHYTAGDVEIICGDIFKLDAALLSACVGV 135
            VLGVELS+ AV  FF+E+ L P+I +    R Y    + ++ GD F L A  L+ C   
Sbjct: 61  EVLGVELSEKAVSDFFEEHDLHPEIDQLDGFRRYRVAGITLLQGDFFALQAEHLAQCRAF 120

Query: 136 YDRAALVALPADMRARYARHVYGQLSAHYRGILITLDYPQEQMDGPPFSVGDAEVQAIFA 195
           YDRAAL+ALP +MR RYA H+   L     G+L+T+DYPQ +M GPPF+V D EV+  +A
Sbjct: 121 YDRAALIALPPEMRERYAGHLQAVLPTRSLGLLVTIDYPQAEMAGPPFAVPDEEVRGYYA 180

Query: 196 AHSEALVIDRRDILDKEPKFSERGVSRLDTVVYQLQR 232
                  ++R D+L    KF ERGVS LD  VY L+R
Sbjct: 181 GGWRIEELERGDVLGVNWKFLERGVSWLDEAVYLLER 217


>VC1226 [QR] COG0500 SAM-dependent methyltransferases Vch Vibrio cholerae
          Length = 218

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 123/218 (56%), Gaps = 4/218 (1%)

Query: 17  EAEFWLERWRDGRTHFHQTRVTPLLQKYWPALALPQGSQVLVPLAGKSLDMVWLASQGHR 76
           + EFW  +W   +  FH   V PLL ++W  LA  +  +VLVPL GKS D++WLA+Q   
Sbjct: 3   DPEFWHNKWAANQIGFHLEDVNPLLIRFWSDLAPKRSEKVLVPLCGKSEDLIWLANQHDS 62

Query: 77  VLGVELSQLAVEQFFDENRLQPQI-RESAYGRHYTAGDVEIICGDIFKLDAALLSACVGV 135
           V GVELSQ+AV  FF E+   P + R +A    Y   ++ +  GD F    A + +   V
Sbjct: 63  VQGVELSQIAVRSFFAEHFYTPTVTRLNAQHELYQFDELTLFTGDFF---TAPVESVDLV 119

Query: 136 YDRAALVALPADMRARYARHVYGQLSAHYRGILITLDYPQEQMDGPPFSVGDAEVQAIFA 195
           YDRAALVALP +MRA YA+ V   L    R +L+++DY Q ++ GPPFSV +AE++ +F 
Sbjct: 120 YDRAALVALPEEMRAEYAQRVLQLLKPGGRILLVSMDYVQTELSGPPFSVPEAEIRTLFM 179

Query: 196 AHSEALVIDRRDILDKEPKFSERGVSRLDTVVYQLQRK 233
                 V     I     K ++ G+SR    V+ +++ 
Sbjct: 180 GCEVRRVYQDTSIDPHLNKRTQAGLSRFAEEVWVIEKS 217