BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0106.p         (204 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2324 [GEPR] COG0477 Permeases of the major facilitator superf...    86   5e-17

>RSc2324 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso
           Ralstonia solanacearum
          Length = 475

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 66/115 (57%)

Query: 17  TEIFVPYFLQVLHGYAPLQAGYMTAAMAGGWSLASLLSSGRSGKDADRMVRFGPVAMTLS 76
           TEIFVP FLQ LHG +PL AGY+ A  + GW+L ++LS+        R +R  P A  L 
Sbjct: 291 TEIFVPLFLQRLHGQSPLIAGYIAATASAGWTLGAILSAALRAASVTRAIRLAPWACALG 350

Query: 77  LLALVVLLPGDVDVAAEGLWLALALGGAGLGIGLGWPHLLTRVLRSXGAGAGDRA 131
           LL L +L+P     A     + +AL   GLG+G+ WPHL  R++ +  A   DRA
Sbjct: 351 LLVLAMLVPIGAGSAWMTTLIIVALTLVGLGVGVVWPHLGNRIMTAAPAEDHDRA 405