BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0084.p         (281 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0234 Non COG                                                        152   1e-36
PA0165 Non COG                                                         80   7e-15

>PA0234 Non COG
          Length = 277

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 135/279 (48%), Gaps = 14/279 (5%)

Query: 14  KHLAAGLIGLSAMAAVQHAHGADWSDNSIGYRYGTKFAEPFNTQDISKNIVNFTHASGYK 73
           K +  G   L A+     +   +W  NS+G+RYG +F  P N    +K I +FTHA GY+
Sbjct: 2   KKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQQFTNPNNPDKFAKRIYSFTHADGYR 61

Query: 74  YGTNFLNVDFLMSDNKDSN------AQEAYLTYRHTLDIGKISGKDLAFGPARGVGFTLG 127
           YG+NF N+D  +SDN+D          E Y  YRH L   ++  + L  G  +   FTLG
Sbjct: 62  YGSNFFNLDVFLSDNRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLG 121

Query: 128 VDLNTKNDPGYGSKKRMWVAGPTLMMDVPGFLNLSIFALWESNK---PVGIANRYSYDTH 184
            D +  N+    +KKR  V GPTL  + PG L+LS+    E N    P      +++DT 
Sbjct: 122 FDASRNNNLA-SAKKRALVFGPTLKFNGPGVLDLSLLYYREKNHFGVPGARHPDHTFDTT 180

Query: 185 PMFNAAWGIPF--GTSGFAFEGYMNYIAAKGKDEFGNSTSPELNFDGQIMYDVGTPLGLG 242
            M N  W  PF  G     F+G++NY+  KG+D     T+ E      +M     P    
Sbjct: 181 YMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMV-AALPGDKR 239

Query: 243 KNTFRVGLEYQYWRNKFGNRSTVPGSFAKTPMLRAEYHF 281
           +    +G+ Y+YW NKFG      GS   TP L  E+ F
Sbjct: 240 QPNLWLGVGYEYWHNKFGVDGGT-GSRTSTPTLNMEFTF 277


>PA0165 Non COG
          Length = 278

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 37/286 (12%)

Query: 16  LAAGLIGLSAMAAVQH----AHGAD-----WSDNSIGYRYGTKFAEPFNTQDISKNIVNF 66
           LA GL+      A  H     H  D     W + S+ Y YG  F          +     
Sbjct: 10  LAGGLLAAGQAVAEDHDMTPTHETDSGPLLWHNESLTYLYGKNF----KINPPIQQTFTL 65

Query: 67  THASGYKYGTNFLNVDFLMSDNKD--SNAQEAY---LTYRHTLDIGKISGKDLAFGPARG 121
            HASG+ +G  F+  D +  + K+  SN +  Y   +T R  L  GK++G DL+FGP + 
Sbjct: 66  EHASGWTWGDLFIFFDQINYNGKEDASNGKNTYYGEITPR--LSFGKLTGADLSFGPVKD 123

Query: 122 VGFTLGVDLNTKNDPGYGSKKRMWVAGPTLMMDVPGFLNLSIFALWESNKPVGIANRY-S 180
           V      +    +   Y       + GP   + +PGF    +   +   KP G   R  +
Sbjct: 124 VLLAGTYEFGEGDTEAY-------LLGPGFDLAIPGFDYFQLNFYYR--KPDGNRVRAGA 174

Query: 181 YDTHPMFNAAWGIPFGTSGFAFEGYMNYI----AAKGKDEFGNSTSPELNFDGQIMYDVG 236
           +   P++  ++ IP G S    +GYM+++    +A       +     L+F+ Q+ YD+G
Sbjct: 175 WQITPVW--SYTIPVGNSDILIDGYMDWVINNKSASTSRRNQSDYHANLHFNPQVKYDLG 232

Query: 237 TPLGLGKNTFRVGLEYQYWRNKFGNR-STVPGSFAKTPMLRAEYHF 281
             LG       VGLEY YW +K+G + S    +   T     +YHF
Sbjct: 233 KALGYEPKHLYVGLEYDYWSDKYGVKDSQYFTTDQNTASFLVKYHF 278