BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0073.p         (102 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2768 [H] COG0611 Thiamine monophosphate kinase Rso Ralstonia ...    67   9e-12

>RSc2768 [H] COG0611 Thiamine monophosphate kinase Rso Ralstonia
           solanacearum
          Length = 332

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 3/78 (3%)

Query: 25  PMAQDSRAALGVGDDCALLTPAXWAPQNRREQVLAAAEQAGVGVTRVGVIESAPGLRLVD 84
           P A+  +  L  GDD  L      AP   RE VLAA + AGV VTR+G I++ PGLRL+D
Sbjct: 256 PPARQLQCMLAGGDDYEL---CFTAPAGLREAVLAAGQHAGVPVTRIGRIDTEPGLRLID 312

Query: 85  AGGEPLDLTPSSFDHFSS 102
           A G+P+  + + FDHFSS
Sbjct: 313 AHGKPVAFSQAGFDHFSS 330