BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0068.p (273 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2773 [F] COG0284 Orotidine-5'-phosphate decarboxylase Rso Ral... 375 e-104 VNG1673G [F] COG0284 Orotidine-5'-phosphate decarboxylase Hbs Ha... 182 6e-46 CAC2652 [F] COG0284 Orotidine-5'-phosphate decarboxylase Cac Clo... 149 9e-36 alr2945_1 [F] COG0284 Orotidine-5'-phosphate decarboxylase Nos N... 147 2e-35 DR2200_2 [F] COG0284 Orotidine-5'-phosphate decarboxylase Dra De... 107 3e-23 >RSc2773 [F] COG0284 Orotidine-5'-phosphate decarboxylase Rso Ralstonia solanacearum Length = 288 Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust. Identities = 183/272 (67%), Positives = 216/272 (79%), Gaps = 5/272 (1%) Query: 3 FIEQLSAAWKTNNSLLCVGLDPDIAKFPAQWKDRPDAIFAFCKGIIDATADVACSFKPQI 62 F EQL+AAW+ NNSLLCVGLDPD A+ PA AIF+FC+ I+DATAD+ C+FKPQI Sbjct: 20 FTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSFCRAIVDATADLVCAFKPQI 79 Query: 63 AYFAALRAEDQLEEICRYIRTTYPHIPIVLDAKRGDIGATAEQYAREAFERYGAQAVTVS 122 AYFA+ RAEDQLE++ YI YP IP++LDAKRGDIG+TAE YA+EAFERY A AVTVS Sbjct: 80 AYFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTAEHYAKEAFERYQADAVTVS 139 Query: 123 PYMGFDSVAPYLEWKDRSAIVLCRTSNAGGSDLQFLTVDGVPLYQHVARLVADKWNTNGQ 182 PYMGFDS+ PYL D+ IVLCRTSNAGGSD+QFL +G P+YQ VA D WNT+GQ Sbjct: 140 PYMGFDSMQPYLVHPDKGVIVLCRTSNAGGSDVQFLETNGRPVYQVVAERARDAWNTSGQ 199 Query: 183 CGLVVGATFPEELAQVRSIIGDMPLLVPGVGAQGGDVAATVKSGKTASGSGMMINSSRAI 242 GLVVGATFP+E+ +VR I+GDMPLL+PG+G QGGD+ ATV++G+TA G+GMMINSSRAI Sbjct: 200 MGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATVRAGRTADGTGMMINSSRAI 259 Query: 243 LYAKPQDGEDYAAAAR-XAQALETRDAINQYR 273 LYA D+A AAR AQA TRD INQYR Sbjct: 260 LYASSD--SDFADAARGVAQA--TRDQINQYR 287 >VNG1673G [F] COG0284 Orotidine-5'-phosphate decarboxylase Hbs Halobacterium sp. NRC-1 Length = 267 Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 116/281 (41%), Positives = 164/281 (58%), Gaps = 22/281 (7%) Query: 1 VTFIEQLSAAWKTNNSLLCVGLDPDIAKFPAQWKDRPDAIFAFCKGIIDATADVACSFKP 60 ++F+E+L A + +S++ VGLDPD+ + P +D +AF + IIDAT + A FKP Sbjct: 1 MSFVEELGARIEAADSVVSVGLDPDMERLPEDVQDAELPRWAFNRRIIDATHEHAAVFKP 60 Query: 61 QIAYFAALRAEDQLEEICRYIRTT--YPH---IPIVLDAKRGDIGATAEQYAREAFERYG 115 A++ ED + R +R T Y H +P++LDAKR DIG TA QYA Sbjct: 61 NAAFY-----EDS--DGWRALRETVAYAHGKGVPVLLDAKRADIGNTARQYAEILAH--- 110 Query: 116 AQAVTVSPYMGFDSVAPYLEWKDRSAIVLCRTSNAGGSDLQFLTVDGVP--LYQHVARLV 173 A+TV+PY+G D++ P+L + VLCRTSN GG D Q L + LY+HVA Sbjct: 111 VDAITVNPYLGEDALQPFLTQDEAGVFVLCRTSNEGGMDFQHLELAAYDRRLYEHVAERA 170 Query: 174 ADKWNTN-GQCGLVVGATFPEELAQVRSIIGDMPLLVPGVGAQGGDVAATVKSGKTASGS 232 A +WN G GLVVGAT P+EL +R + ++P LVPGVGAQGGD A V+ G G Sbjct: 171 A-EWNAQYGDVGLVVGATAPDELQAIRERVPELPFLVPGVGAQGGDAEAAVEYGLNDDGV 229 Query: 233 GMMINSSRAILYAKPQDGEDYAAAARXAQALETRDAINQYR 273 G ++NS+R +++A AAA A+ L R+ +N++R Sbjct: 230 G-LVNSTRGVIFAGEHGSAWAAAAGDAARTL--RERLNRHR 267 >CAC2652 [F] COG0284 Orotidine-5'-phosphate decarboxylase Cac Clostridium acetobutylicum Length = 286 Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 105/277 (37%), Positives = 146/277 (52%), Gaps = 31/277 (11%) Query: 18 LCVGLDPDIAKFPAQWKDR----PDAIFAFCKGIIDATADVACSFKPQIAYFAA--LRAE 71 +C+GLD DI P ++ + DAIF F K IIDAT DV +K QIAY+ A L+ Sbjct: 16 VCLGLDTDITYVPEEFCKKFNSIEDAIFNFNKKIIDATLDVVSCYKVQIAYYEAYGLKGL 75 Query: 72 DQLEEICRYIRTTYPHIPIVLDAKRGDIGATAEQYAREAFE-RYGAQAVTVSPYMGFDSV 130 + Y+R + D KRGDI TAE YA+ FE + A VT++PYMG D + Sbjct: 76 LAYKRTLEYLRE--KKAIAIADIKRGDIAKTAEMYAKAHFEGDFEADFVTLNPYMGLDGI 133 Query: 131 APYL---EWKDRSAIVLCRTSNAGGSDLQFL-TVDGVPLYQHVARLVAD---------KW 177 PY+ E ++ +L RTSN G D+Q++ T G +Y V + D K+ Sbjct: 134 EPYMPYIEKMEKGLFILLRTSNKGAYDIQYIKTQGGKNVYDEVGEKIYDLGQKATGRSKY 193 Query: 178 NTNGQCGLVVGATFPEELAQVRSIIGDMPLLVPGVGAQGGDVAATVKSGKTASGSGMMIN 237 ++ G VVG T EE ++R+ +M L+PG GAQGG A S G+G ++N Sbjct: 194 SS---IGAVVGCTHVEEGVEIRNKFKNMFFLIPGYGAQGG--TAKEVSLYLREGNGGVVN 248 Query: 238 SSRAIL--YAKPQDGED-YAAAARXAQALETRDAINQ 271 SSR IL Y K ++GE + AR A A+ RD I + Sbjct: 249 SSRGILLAYKKEENGEKIFDECARLA-AINMRDEIRK 284 >alr2945_1 [F] COG0284 Orotidine-5'-phosphate decarboxylase Nos Nostoc sp. PCC 7120 Length = 257 Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 132/237 (55%), Gaps = 5/237 (2%) Query: 1 VTFIEQLSAAWKTNNSLLCVGLDPDIAKFPAQW--KDRPDAIFAFCKGIIDATADVACSF 58 + F ++L N SLL VGLDP+ P ++ +D D ++ + + II TAD C++ Sbjct: 24 MIFFDKLHQNISQNQSLLFVGLDPNPEMMPGRYSSQDIIDGLWDWLQFIIAETADFVCAY 83 Query: 59 KPQIAYFAALRAEDQLEEICRYIRTTYPHIPIVLDAKRGDIGATAEQYAREAFERYGAQA 118 KP + ++ AL LE + + + HIPI+LDAK D+ T+ +A+ F ++G A Sbjct: 84 KPTLGFYEALGVPG-LELLQKTLAAIPSHIPIILDAKHSDLN-TSTIFAKTVFTQWGVDA 141 Query: 119 VTVSPYMGFDSVAPYLEWKDRSAIVLCRTSNAGGSDLQFLTVDGVPLYQHVARLVADKWN 178 +T+SPY G D VAP+L + D++ +LC TSN G LQ PLY V + + W Sbjct: 142 ITLSPYTGQDHVAPFLVYPDKAVFILCSTSNPGAEALQQYPTRESPLYLQVVQ-ESKNWG 200 Query: 179 TNGQCGLVVGATFPEELAQVRSIIGDMPLLVPGVGAQGGDVAATVKSGKTASGSGMM 235 T Q GL VG T E LA++R + + ++V + A+GG++ ++ G G+G++ Sbjct: 201 TPEQLGLEVGTTNAEVLARIRQVAPERMIMVRSIWAEGGNLNRILEVGLNTDGNGLL 257 >DR2200_2 [F] COG0284 Orotidine-5'-phosphate decarboxylase Dra Deinococcus radiodurans Length = 272 Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 87/260 (33%), Positives = 140/260 (53%), Gaps = 24/260 (9%) Query: 2 TFIEQLSAAWKTNNSLLCVGLDPDIAKFPAQWKDRPDAIFAFCKGIIDATADVACSFKPQ 61 TF + ++ + + LCVGLDP + ++ + R + + +++A+A A KPQ Sbjct: 4 TFAQAVTERTLSRRTRLCVGLDPRLGEYRDVAQLRQNTL-----DVLEASAPYAACVKPQ 58 Query: 62 IAYFAALRAED--QLEEICRYIRTTYPHIPIVLDAKRGDIGATAEQYAREAF-ERYGAQA 118 +A+F AL LEE+C RT +P++LD KRGDIG TA YA+ + A Sbjct: 59 LAFFEALGLPGFTLLEEVCAAARTL--GLPVLLDGKRGDIGTTAAAYAQGWLGGTHAGDA 116 Query: 119 VTVSPYMGFDSVAPYLEWKDRSA---IVLCRTSNAGGSDLQFLTVDGVPLYQHVARLVAD 175 +TV+P++GF ++ P+++ + VL +TSN DLQ V + +ARL + Sbjct: 117 LTVNPFLGFQTLTPFVQAARENGGAIFVLVKTSNPDQQDLQGQGVS-ERIAVEIARLGDE 175 Query: 176 KWNTNG---QCGLVVGATFPEELAQVRSIIGDMPLLVPGV---GAQGGDVAATVKSGKTA 229 + +G G VVGAT P +LA R+++ LL+PG+ GAQ D+A +G Sbjct: 176 EGLGDGDYASVGAVVGATHPGDLATFRALMPKALLLLPGLGAQGAQARDLAGAFHAG--- 232 Query: 230 SGSGMMINSSRAILYAKPQD 249 G+G + ++SRA+ YA+ D Sbjct: 233 -GTGALASASRAVQYARGLD 251