BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0024.p (207 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1174 [R] COG4174 ABC-type uncharacterized transport system, p... 282 3e-76 mll5491 Non COG 266 3e-71 BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, ... 263 2e-70 YPO1272 [R] COG4174 ABC-type uncharacterized transport system, p... 254 1e-67 AGc318 [R] COG4174 ABC-type uncharacterized transport system, pe... 253 2e-67 >RSc1174 [R] COG4174 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 351 Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 146/194 (75%), Positives = 173/194 (89%) Query: 14 LVLVGYSIPGFVLGVFLLVMFGGGSFVQWFPLRGLTSDDWATLSLAGKVKDYLWHITLPV 73 +VLVGY+IPGFVLGV LLV+FGGG+F QWFP+RGLTSD+W LSL GKV DYLWHI LP+ Sbjct: 158 IVLVGYAIPGFVLGVLLLVLFGGGTFFQWFPIRGLTSDNWGQLSLPGKVTDYLWHIALPI 217 Query: 74 IASVAGSFAVMTMLTKNTFLEEIRKQYVLTARAKGLSENKVLYKHVFRNALIPLVTGFPA 133 ASV GSFAV+TMLTKN FLEEIRKQYVLTAR+KGLSE +VL+KH+FRNA+IPLVTGFPA Sbjct: 218 TASVVGSFAVITMLTKNAFLEEIRKQYVLTARSKGLSERRVLWKHIFRNAMIPLVTGFPA 277 Query: 134 AFIGAFFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLCY 193 AFIGAFF GSLLIE LFSLDG+GL+SYE+V++RDYPVV+GTLY+FTLIGL +L+ D+CY Sbjct: 278 AFIGAFFTGSLLIEKLFSLDGMGLMSYEAVVQRDYPVVLGTLYVFTLIGLATRLISDVCY 337 Query: 194 VWADPRVQFESLAK 207 V DPR+ F ++ + Sbjct: 338 VLVDPRIHFGAIGR 351 >mll5491 Non COG Length = 364 Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 124/191 (64%), Positives = 152/191 (79%) Query: 13 GLVLVGYSIPGFVLGVFLLVMFGGGSFVQWFPLRGLTSDDWATLSLAGKVKDYLWHITLP 72 G+V+VGY+IPGF+ G+ L+V+F GGSF WFPLRG+ SD+W LS GK+ DY WH+TLP Sbjct: 170 GVVIVGYAIPGFLFGIMLMVLFAGGSFWDWFPLRGIVSDNWDQLSWLGKIADYFWHMTLP 229 Query: 73 VIASVAGSFAVMTMLTKNTFLEEIRKQYVLTARAKGLSENKVLYKHVFRNALIPLVTGFP 132 + A V +FA T+LTKN+FLEEIRKQYV+TARAKGLSE +VLY HVFRNA++ ++ GFP Sbjct: 230 LTALVLSAFATTTLLTKNSFLEEIRKQYVVTARAKGLSERQVLYGHVFRNAMLIVIAGFP 289 Query: 133 AAFIGAFFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLC 192 AFI AFF GSLLIE +FSLDGLGLL + SV+ RDYPVV LY+F+L+GL V LL DL Sbjct: 290 GAFISAFFTGSLLIENIFSLDGLGLLGFRSVVERDYPVVFANLYIFSLLGLFVGLLSDLI 349 Query: 193 YVWADPRVQFE 203 Y W DPR+ FE Sbjct: 350 YTWVDPRIDFE 360 >BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, permease component Bme Brucella melitensis Length = 365 Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 122/191 (63%), Positives = 154/191 (80%) Query: 13 GLVLVGYSIPGFVLGVFLLVMFGGGSFVQWFPLRGLTSDDWATLSLAGKVKDYLWHITLP 72 ++++GY+IP F+ + L+V+F GGSF WFPLRGLTS D+A ++ K+KDYLWH+ LP Sbjct: 171 AVIIIGYAIPSFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLP 230 Query: 73 VIASVAGSFAVMTMLTKNTFLEEIRKQYVLTARAKGLSENKVLYKHVFRNALIPLVTGFP 132 V A V +FA T+LTKN+FLEEIRKQYV TARAKGL+EN+VLY+HVFRNA++ ++ GFP Sbjct: 231 VTALVLSAFATTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFP 290 Query: 133 AAFIGAFFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLC 192 AFI AFF GSLLIET+FSLDGLGLL Y+SVI RDYPVV L++F+LIGL+V LL DL Sbjct: 291 GAFISAFFTGSLLIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVGLLSDLT 350 Query: 193 YVWADPRVQFE 203 Y W DPR+ F+ Sbjct: 351 YTWIDPRIDFD 361 >YPO1272 [R] COG4174 ABC-type uncharacterized transport system, permease component Ype Yersinia pestis Length = 366 Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 115/190 (60%), Positives = 152/190 (80%) Query: 14 LVLVGYSIPGFVLGVFLLVMFGGGSFVQWFPLRGLTSDDWATLSLAGKVKDYLWHITLPV 73 L+++GY+IP F+ + L+V+F GGS+ FPLRGL S +W TL K+ DYLWHITLPV Sbjct: 174 LIIIGYAIPSFLFAILLVVLFSGGSYFDLFPLRGLVSSNWDTLPWYSKITDYLWHITLPV 233 Query: 74 IASVAGSFAVMTMLTKNTFLEEIRKQYVLTARAKGLSENKVLYKHVFRNALIPLVTGFPA 133 +A+V G FA +TMLTKN+FL+EIRKQYV+TARAKGL E K+LY+HVFRNA++ ++ GFPA Sbjct: 234 LATVIGGFATLTMLTKNSFLDEIRKQYVVTARAKGLPEEKILYRHVFRNAMLLVIAGFPA 293 Query: 134 AFIGAFFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLCY 193 F+ FF GSLLIE +FSL+GLGLL Y++ I+RDYPV+ GTLY+FTLIGL++ ++ D+ Y Sbjct: 294 TFVSMFFTGSLLIEVMFSLNGLGLLGYDATIQRDYPVMFGTLYIFTLIGLLLNIVSDITY 353 Query: 194 VWADPRVQFE 203 DPR+ FE Sbjct: 354 TLVDPRIDFE 363 >AGc318 [R] COG4174 ABC-type uncharacterized transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 364 Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 117/191 (61%), Positives = 152/191 (79%) Query: 13 GLVLVGYSIPGFVLGVFLLVMFGGGSFVQWFPLRGLTSDDWATLSLAGKVKDYLWHITLP 72 G++++GY++P F+ G+ L+V+F GGSF WFPLRGL SD++ L+ K+ DY WH+TLP Sbjct: 170 GIIIIGYAVPSFLFGILLIVLFAGGSFFDWFPLRGLVSDNFDQLNWWQKIIDYFWHLTLP 229 Query: 73 VIASVAGSFAVMTMLTKNTFLEEIRKQYVLTARAKGLSENKVLYKHVFRNALIPLVTGFP 132 +IA +FA T+LTKN+F++EI+KQYV+TARAKGLSE KVLY HVFRNA++ ++ GFP Sbjct: 230 LIALSLSAFATTTLLTKNSFIDEIKKQYVVTARAKGLSERKVLYGHVFRNAMLIVIAGFP 289 Query: 133 AAFIGAFFAGSLLIETLFSLDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLC 192 AFI AFF GSLLIE +FSLDGLG L Y SV+ RDYP+V GTL++F+L+GLVV LL DL Sbjct: 290 GAFISAFFTGSLLIENIFSLDGLGRLGYLSVVNRDYPIVFGTLFIFSLMGLVVGLLSDLI 349 Query: 193 YVWADPRVQFE 203 Y W DPR+ FE Sbjct: 350 YTWIDPRIDFE 360