BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0191.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 322 7e-88 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 246 5e-65 mll4886 Non COG 197 3e-50 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 196 5e-50 AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport... 184 2e-46 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 157/241 (65%), Positives = 190/241 (78%) Query: 8 LSLRGVAKSFGNSRIIRDITMDVAPGERIALIGPNGAGKSTLFNMISGRFQPSGGDIVLN 67 L LR V K FG + IIR + + + GER ALIGPNGAGKST FN+ISGRF PS G + LN Sbjct: 8 LELRDVRKRFGATEIIRGVNLTIGRGERHALIGPNGAGKSTTFNLISGRFAPSAGSVRLN 67 Query: 68 GNSLLKLEPYEIYRQGLSRSFQITNIFAKLSVYENIRSSVLWSLGHRYSLFKFLNKLTDV 127 G + L PYEI R+GLSRSFQITNIF +LSV+EN+R +VLWSLG++YS + L +L D Sbjct: 68 GEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYSFWHRLAELRDA 127 Query: 128 RERAEQLMEQVGLARRKDVLAGLLTYAEQRSLEIAMTVAGNPSVVLLDEPTAGMSRSESE 187 RERAE ++EQ+GL R D AG LTYAEQR+LEI +T+AG V+LLDEPTAGMSRSES+ Sbjct: 128 RERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDEPTAGMSRSESD 187 Query: 188 QAVELIRKLTEGRTLLMVEHDMSVVFGLADRIAVLAGGALIALESPEKIRHNHAVKEAYL 247 AV+LIRK+T G+TL+MVEHDMSVVFGLADRI+VL G +IA ++PE IR+N VKEAYL Sbjct: 188 HAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIRNNRRVKEAYL 247 Query: 248 G 248 G Sbjct: 248 G 248 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 127/249 (51%), Positives = 174/249 (69%), Gaps = 1/249 (0%) Query: 1 MATNDVVLSLRGVAKSFGNSRIIRDITMDVAPGERIALIGPNGAGKSTLFNMISGRFQPS 60 M T D+ L L + KSFG + IIR + + V GER A+IGPNGAGKSTLF++ISG F PS Sbjct: 1 MMTKDI-LVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPS 59 Query: 61 GGDIVLNGNSLLKLEPYEIYRQGLSRSFQITNIFAKLSVYENIRSSVLWSLGHRYSLFKF 120 G I G + L P + R+GL+RSFQITNIF L+V+ENIR +V+ +++ ++ Sbjct: 60 SGSIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRP 119 Query: 121 LNKLTDVRERAEQLMEQVGLARRKDVLAGLLTYAEQRSLEIAMTVAGNPSVVLLDEPTAG 180 ++ + V E L+EQV L R LA L+Y+EQRSLEI MT+A +P +++LDEP AG Sbjct: 120 VSSMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAG 179 Query: 181 MSRSESEQAVELIRKLTEGRTLLMVEHDMSVVFGLADRIAVLAGGALIALESPEKIRHNH 240 MS+ E++ V LIR++T+ RTL++VEHDM VVF LADRI+VL G +IA +P++IR N Sbjct: 180 MSQEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENA 239 Query: 241 AVKEAYLGD 249 V+EAYLG+ Sbjct: 240 RVREAYLGE 248 >mll4886 Non COG Length = 241 Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 103/242 (42%), Positives = 152/242 (62%), Gaps = 7/242 (2%) Query: 7 VLSLRGVAKSFGNSRIIRDITMDVAPGERIALIGPNGAGKSTLFNMISGRFQPSGGDIVL 66 +L+ +G++++FG R + + + PGE A+IGPNGAGK+T +M+SGR QPS G IV Sbjct: 4 LLATKGLSRNFGGLRAVDSVDFTLMPGEIRAVIGPNGAGKTTFVSMVSGRIQPSSGAIVF 63 Query: 67 NGNSLLKLEPYEIYRQGLSRSFQITNIFAKLSVYENIRSSVLWSLGHRYSLFKFLNKLTD 126 +G + L Y RQG++ +FQIT+I+A LSVY N+ V +L H S + Sbjct: 64 DGADITSLPAYVRVRQGIAYTFQITSIYANLSVYANVALPVQLTLRHGPSK-------SA 116 Query: 127 VRERAEQLMEQVGLARRKDVLAGLLTYAEQRSLEIAMTVAGNPSVVLLDEPTAGMSRSES 186 ++ +E+ GLA R + AG L+Y QR LE+AM +A P +++LDEPT G++ SE Sbjct: 117 IQAAVMTALERTGLADRAHMPAGQLSYGHQRLLEVAMGLALKPRLLILDEPTQGLADSEI 176 Query: 187 EQAVELIRKLTEGRTLLMVEHDMSVVFGLADRIAVLAGGALIALESPEKIRHNHAVKEAY 246 + + L+R + T+L++EH+M VV LADRI V G ++A +PE IR N AV+EAY Sbjct: 177 DNFIVLVRDIASSATVLLIEHNMPVVMQLADRITVFNAGKILAEGTPEAIRENAAVQEAY 236 Query: 247 LG 248 LG Sbjct: 237 LG 238 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 103/249 (41%), Positives = 152/249 (61%) Query: 4 NDVVLSLRGVAKSFGNSRIIRDITMDVAPGERIALIGPNGAGKSTLFNMISGRFQPSGGD 63 D++L RG+ K+F + D+ + V G ALIGPNGAGK+T FN+++ P+ G Sbjct: 3 QDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTRGT 62 Query: 64 IVLNGNSLLKLEPYEIYRQGLSRSFQITNIFAKLSVYENIRSSVLWSLGHRYSLFKFLNK 123 I+ NG + P +I R+G+ RSFQI+ +F LSV EN+R + LG Y+ ++ Sbjct: 63 ILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSEKT 122 Query: 124 LTDVRERAEQLMEQVGLARRKDVLAGLLTYAEQRSLEIAMTVAGNPSVVLLDEPTAGMSR 183 L + +RA QL++QVGL + L Y +R+LEIA T+A P ++LLDEPT GM Sbjct: 123 LAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGMGH 182 Query: 184 SESEQAVELIRKLTEGRTLLMVEHDMSVVFGLADRIAVLAGGALIALESPEKIRHNHAVK 243 + ++ ELI+++ EGRT+LMVEH+M+VV +AD+I VL G ++A E + N V Sbjct: 183 EDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQVM 242 Query: 244 EAYLGDHHA 252 EAY+G A Sbjct: 243 EAYMGTADA 251 >AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 268 Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 147/247 (59%) Query: 6 VVLSLRGVAKSFGNSRIIRDITMDVAPGERIALIGPNGAGKSTLFNMISGRFQPSGGDIV 65 VVLS RG+ K+FG ++++ +DV ALIGPNGAGK+T+FN+++ QP+GG I Sbjct: 22 VVLSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAIT 81 Query: 66 LNGNSLLKLEPYEIYRQGLSRSFQITNIFAKLSVYENIRSSVLWSLGHRYSLFKFLNKLT 125 G + K P ++ R GL RSFQI+ +F L+V EN+R ++ + L+ L Sbjct: 82 FMGTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQFWLPLSSLD 141 Query: 126 DVRERAEQLMEQVGLARRKDVLAGLLTYAEQRSLEIAMTVAGNPSVVLLDEPTAGMSRSE 185 + RAE+L+ VGL R K+ LA L+Y +R LEIA T+A +P V+LLDEP AGM + Sbjct: 142 RLNARAEELISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGGED 201 Query: 186 SEQAVELIRKLTEGRTLLMVEHDMSVVFGLADRIAVLAGGALIALESPEKIRHNHAVKEA 245 ELIR++ + R +LMVEH++ VV + + VL G ++A + + V+ A Sbjct: 202 VSHVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVRTA 261 Query: 246 YLGDHHA 252 Y+G A Sbjct: 262 YMGTEEA 268