BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0163.p (239 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport... 379 e-105 SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor... 283 2e-76 AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport... 281 7e-76 BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo... 277 1e-74 RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport... 189 3e-48 >RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 246 Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/245 (76%), Positives = 212/245 (86%), Gaps = 10/245 (4%) Query: 5 ATPALEISGLHAWYGESHILHDVNLSVNQGEVVTLLGRNGAGRTTTLRSIMGLTGTRKGS 64 +TPAL+I LHAWYGESHILH V+L+VN+GEVVTLLGRNGAGRTTTLR+IMGL GTRKGS Sbjct: 2 STPALQIKDLHAWYGESHILHGVDLTVNRGEVVTLLGRNGAGRTTTLRAIMGLVGTRKGS 61 Query: 65 IRIN-----GVESIGLSTHKIPHLSVGYCPEERGIFSSLSTEENLLLPPVLRG-----GG 114 I ++ GVE+IGL TH+I H +GYCPEERGIF+SLS EENLLLPPVL+G G Sbjct: 62 IVVHDDAGQGVETIGLPTHRIAHCGIGYCPEERGIFASLSCEENLLLPPVLKGQVATRGN 121 Query: 115 TPMSIDEIYGMFPNLLERKASQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVI 174 MS+ EIY MFPNL ER+ SQGTRLSGGEQQMLAV RILRTGA LLLLDEISEGLAPVI Sbjct: 122 AGMSVAEIYEMFPNLKERRNSQGTRLSGGEQQMLAVGRILRTGANLLLLDEISEGLAPVI 181 Query: 175 VQTLARMILTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVERFAASELEEKMPVLN 234 VQ LARMIL LK +GYT+VMVEQNFRFAAPLADRFYVMEHG+IVERF A++L++KMP+L+ Sbjct: 182 VQALARMILMLKKRGYTVVMVEQNFRFAAPLADRFYVMEHGRIVERFEAAQLQDKMPILH 241 Query: 235 ELLGV 239 ELLGV Sbjct: 242 ELLGV 246 >SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 233 Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 133/233 (57%), Positives = 184/233 (78%), Gaps = 2/233 (0%) Query: 7 PALEISGLHAWYGESHILHDVNLSVNQGEVVTLLGRNGAGRTTTLRSIMGLTGTRKGSIR 66 P L+++GL+AWYGESH+LH V+++V +GE+VTLLGRNG G+TTTLR+IMG+ R+G I Sbjct: 3 PLLKVAGLNAWYGESHVLHGVDMTVGEGEMVTLLGRNGVGKTTTLRAIMGIVRERRGEIS 62 Query: 67 INGVESIGLSTHKIPHLSVGYCPEERGIFSSLSTEENLLLPPVLRGGGTPMSIDEIYGMF 126 G + + + H++ H +G+ PEERGIFS+L+ ENLLLPP + GG M+IDEI+ +F Sbjct: 63 FAGEDLMRVPLHRVAHRGLGFVPEERGIFSTLTVYENLLLPPAVAKGG--MTIDEIFELF 120 Query: 127 PNLLERKASQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQTLARMILTLK 186 PNL ER+ S GT+LSGGEQQMLA+ARILRTG R++LLDE +EGLAPVIVQ + ++ LK Sbjct: 121 PNLHERRNSAGTKLSGGEQQMLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLK 180 Query: 187 AKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVERFAASELEEKMPVLNELLGV 239 +G T+++VEQNFRFA+ +ADRFY+M+HG++ F SEL +M +L+++LGV Sbjct: 181 ERGMTVLLVEQNFRFASKVADRFYLMDHGRVAGEFPVSELSGRMDMLHDVLGV 233 >AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 233 Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 134/231 (58%), Positives = 180/231 (77%), Gaps = 2/231 (0%) Query: 9 LEISGLHAWYGESHILHDVNLSVNQGEVVTLLGRNGAGRTTTLRSIMGLTGTRKGSIRIN 68 LE+S L +WYGES LH V+L+V +GE +T+LGRNG G+TTTLR+IMG+ RKG I++ Sbjct: 5 LEVSNLKSWYGESQALHGVDLTVGEGETITILGRNGVGKTTTLRTIMGIIRNRKGVIKLG 64 Query: 69 GVESIGLSTHKIPHLSVGYCPEERGIFSSLSTEENLLLPPVLRGGGTPMSIDEIYGMFPN 128 G + + + H+ +G+ PEERGIF++LS EENL+LPPV+ GG M++DEIY +FPN Sbjct: 65 GKDMMPVPLHRTAKYGIGFVPEERGIFATLSVEENLMLPPVVASGG--MTLDEIYELFPN 122 Query: 129 LLERKASQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQTLARMILTLKAK 188 L ER+ S GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + ++ LK++ Sbjct: 123 LHERRTSPGTKLSGGEQQMLAMARILRTGVKVLLLDEPTEGLAPVIVQRIGEVLQKLKSR 182 Query: 189 GYTIVMVEQNFRFAAPLADRFYVMEHGQIVERFAASELEEKMPVLNELLGV 239 G T+V+VEQNFRFA+ +ADRFY+M+HGQ+V F EL +M LN++LGV Sbjct: 183 GMTVVLVEQNFRFASRIADRFYLMDHGQMVSNFPVGELSARMGELNKVLGV 233 >BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 274 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 134/236 (56%), Positives = 181/236 (76%), Gaps = 3/236 (1%) Query: 7 PALEISGLHAWYGESHILHDVNLSVNQGEVVTLLGRNGAGRTTTLRSIMGLTGTRKGSIR 66 P L + GL+AWYGESH L V+L + GE +TLLGRNG G+TTTLR+IMG+ R G+I Sbjct: 39 PLLSVRGLYAWYGESHALQGVDLDIWPGETITLLGRNGVGKTTTLRAIMGIIRKRTGTIT 98 Query: 67 INGVESIGLSTHKIPHLSVGYCPEERGIFSSLSTEENLLLPPVL-RGGGT--PMSIDEIY 123 ++G + + + H+I + +G+ PEERGIF+SL+ ENLLLPPV+ +GGG+ MS+DEIY Sbjct: 99 LDGKDIMRVPLHRIAYEGLGFVPEERGIFASLNVHENLLLPPVVAKGGGSQGAMSLDEIY 158 Query: 124 GMFPNLLERKASQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQTLARMIL 183 +FPNL ER+ S GT+LSGGEQQMLA+ARILRTG ++LLLDE +EGLAPVIVQ + +++ Sbjct: 159 ELFPNLYERRNSPGTKLSGGEQQMLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLV 218 Query: 184 TLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVERFAASELEEKMPVLNELLGV 239 LK +G T+++VEQNFRFAA +ADRFY+M+HG + + F +EL +M L + LGV Sbjct: 219 ELKKRGMTVLLVEQNFRFAAKVADRFYLMDHGVVTDNFPTTELPARMAALTQALGV 274 >RSc1754 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 239 Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 105/239 (43%), Positives = 147/239 (61%), Gaps = 5/239 (2%) Query: 4 SATPALEISGLHAWYGESHILHDVNLSVNQGEVVTLLGRNGAGRTTTLRSIMGLTGTRKG 63 + TP LE+ GLHA+YG+SHILH V+L V +GE+V LLGRNG GR+T +SIMG+ +G Sbjct: 3 ATTPMLEVRGLHAYYGKSHILHGVDLHVGEGEIVALLGRNGVGRSTLAKSIMGMVRC-EG 61 Query: 64 SIRINGVESIGLSTHKIPHLSVGYCPEERGIFSSLSTEENLLLPPVLRGGGTP---MSID 120 I + G + GL T ++ H +GY PE R IF +L+ +NLLL R P D Sbjct: 62 HILLRGKDVRGLRTFEVAHRGIGYVPENRDIFPTLTVRQNLLLGEK-RNPRQPRPRWQFD 120 Query: 121 EIYGMFPNLLERKASQGTRLSGGEQQMLAVARILRTGARLLLLDEISEGLAPVIVQTLAR 180 ++Y +FP L ER+ + LSGGEQQML + R L +++DE +EGLAP+IV + Sbjct: 121 DMYRLFPRLKEREHTPAGVLSGGEQQMLTLCRTLMGDPDFVIIDEPTEGLAPLIVAQVGE 180 Query: 181 MILTLKAKGYTIVMVEQNFRFAAPLADRFYVMEHGQIVERFAASELEEKMPVLNELLGV 239 + TLKA+G ++++VEQ A ++ R YVM HGQIV ++L+ V E L V Sbjct: 181 YLKTLKARGISVLLVEQKLAIALDISQRVYVMGHGQIVFEGTPADLKADARVRQEWLEV 239