BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0125.p (211 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value NMA1452 [E] COG0066 3-isopropylmalate dehydratase small subunit ... 233 2e-61 NMB1034 [E] COG0066 3-isopropylmalate dehydratase small subunit ... 233 2e-61 RSc1989 [E] COG0066 3-isopropylmalate dehydratase small subunit ... 231 9e-61 PA3120 [E] COG0066 3-isopropylmalate dehydratase small subunit P... 220 2e-57 XF2374 [E] COG0066 3-isopropylmalate dehydratase small subunit X... 219 2e-57 >NMA1452 [E] COG0066 3-isopropylmalate dehydratase small subunit NmA Neisseria meningitidis Z2491 Length = 213 Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 104/211 (49%), Positives = 144/211 (68%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M FT + IVAPLD +NVDTDAIIPKQ++KS+ + G G FDEWRY D GEPGMD Sbjct: 1 MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFDEWRYLDHGEPGMDNSK 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP DF LN P Y A++LL R+NFGCGSSREHA WAL D+G + ++APSF DIFF NC Sbjct: 61 RPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDYGFRAVIAPSFADIFFNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L E++++LF+ ++ + G S++L++Q +++ F++ K LL Sbjct: 121 YKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAEQTLTTPSGETFTFDITEHRKHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G DEIG+TL + +I +E R +PW+F Sbjct: 181 NGLDEIGLTLQHADEIHAFEEKRRQSQPWLF 211 >NMB1034 [E] COG0066 3-isopropylmalate dehydratase small subunit Nme Neisseria meningitidis MC58 Length = 213 Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 104/211 (49%), Positives = 143/211 (67%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M FT + IVAPLD +NVDTDAIIPKQ++KS+ + G G FDEWRY D GEPGMD Sbjct: 1 MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFDEWRYLDHGEPGMDNSK 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP DF LN P Y A++LL R+NFGCGSSREHA WAL D+G + ++APSF DIFF NC Sbjct: 61 RPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDYGFRAVIAPSFADIFFNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L E +++LF+ ++ + G S++L++Q +++ F++ K LL Sbjct: 121 YKNGLLPIVLTEERVDRLFKEVEANEGYQLSIDLAEQTLTTPSGETFTFDITEHRKHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G DEIG+TL + +I +E R +PW+F Sbjct: 181 NGLDEIGLTLQHADEIHAFEEKRRQSQPWLF 211 >RSc1989 [E] COG0066 3-isopropylmalate dehydratase small subunit Rso Ralstonia solanacearum Length = 216 Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 140/210 (66%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M+ FT +G+VAPLD NVDTDAIIPKQ++KS+ + G G LFDEWRY+D+GEPG D Sbjct: 1 MEQFTIHTGLVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNLFDEWRYKDVGEPGQDNSK 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP DFVLN P Y A VLLAR+NFGCGSSREHA WAL +G + I+APSF DIFF NC Sbjct: 61 RPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFFNNC 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L +++ LF + G +V+L +Q+ +Y F++ K LL Sbjct: 121 FKNGLLPIVLTESQVDHLFNETQAFTGYQLTVDLDKQVVVTPGGTAYPFDVTAFRKYCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWM 210 +G D+IG+TL + QI YE R + PW+ Sbjct: 181 NGFDDIGLTLRYADQIKAYEAQRLAKMPWL 210 >PA3120 [E] COG0066 3-isopropylmalate dehydratase small subunit Pae Pseudomonas aeruginosa Length = 212 Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 103/211 (48%), Positives = 140/211 (66%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M +T +G+VAPLD ANVDTD IIPKQ++KS+ + G G LFDEWRY D+G+PG D Sbjct: 1 MKPYTQTTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPGQDNSK 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP DFVLN P Y A VLLARENFGCGSSREHA WAL ++G + ++APS+ DIFF N Sbjct: 61 RPLNPDFVLNQPRYQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSYADIFFNNS 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L E+++LFR ++ + G S++L+ Q + FE+ K LL Sbjct: 121 FKNGLLPIILPEAEVDELFRQVEANEGYQLSIDLAAQTVTRPDGKVLGFEVDPFRKHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G D+IG+TL + I +E ++PW+F Sbjct: 181 NGLDDIGLTLQDADAIRAFEDGYRQQQPWLF 211 >XF2374 [E] COG0066 3-isopropylmalate dehydratase small subunit Xfa Xylella fastidiosa 9a5c Length = 215 Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 102/211 (48%), Positives = 139/211 (65%) Query: 1 MDTFTNFSGIVAPLDYANVDTDAIIPKQYMKSVNKLGLGKYLFDEWRYEDIGEPGMDCEG 60 M FT +G+V PLD NVDTD IIPKQ++KS+ + G G LFDEWRY D G+PG D Sbjct: 1 MKPFTQHTGLVCPLDRVNVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDAGQPGQDNSK 60 Query: 61 RPRRADFVLNLPEYTHAKVLLARENFGCGSSREHAVWALADFGIKVIVAPSFGDIFFANC 120 RP +DFVLN P Y A VLLAR+NFGCGSSREHA WAL ++G + ++APSF DIFF N Sbjct: 61 RPINSDFVLNFPRYRGASVLLARDNFGCGSSREHAAWALDEYGFRTVIAPSFADIFFNNS 120 Query: 121 TRNGILPVRLASEEIEQLFRLIKEHPGISASVNLSQQIFAAEENDSYRFELPGRAKQLLL 180 +NG+LP+ L E++ LF + G + +V+L+ Q ++ +Y F++ K LL Sbjct: 121 FKNGLLPLVLNKVEVDALFAQCQVTEGYTLTVDLAAQQVITQDGTTYAFQIDTFRKHCLL 180 Query: 181 HGGDEIGMTLSLSTQIDNYERSRAYREPWMF 211 +G D+IG+TL + I +E + R+PW+F Sbjct: 181 NGLDDIGLTLQHAEAIRVFEAAHRIRQPWLF 211