BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0120.p (347 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2006 [GEPR] COG0477 Permeases of the major facilitator superfa... 117 6e-26 Z3394 [GEPR] COG0477 Permeases of the major facilitator superfam... 103 5e-22 ECs3031 [GEPR] COG0477 Permeases of the major facilitator superf... 103 5e-22 RSc1093 [GEPR] COG0477 Permeases of the major facilitator superf... 101 2e-21 RSp0896 [GEPR] COG0477 Permeases of the major facilitator superf... 99 2e-20 >PA2006 [GEPR] COG0477 Permeases of the major facilitator superfamily Pae Pseudomonas aeruginosa Length = 450 Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Query: 156 SVKELFSQGFLGPTILLWIACFFNVLIIYFVISWIPSLLRTTELTRDAGVLAVTAFSFGG 215 +V ELF G+ PT+LLW F +++++YF++SW+PSLL+ + LTR+A LA + F F G Sbjct: 242 TVLELFRHGYARPTLLLWATFFVSLILLYFMVSWLPSLLQESGLTRNAANLATSMFLFAG 301 Query: 216 MIGSLAQGALMNRFGVRRFILMEFVACLCCFGALSAVSSNLI-FSVALFGLLGFMVNGIQ 274 +G++ L +R + +L +A F L ++ + + +A GF + G Q Sbjct: 302 TLGAMLLAWLADRLRSKVRLLAAILAGAALFTLLLGLNHDQPRWLLAFVFAAGFCIIGGQ 361 Query: 275 AGLNVFAIEKIYPLSIRATGIGWAGGIGRIGSMTGPLLGGLFLTFHLTINQVYLMALLPV 334 LN FA YP +RATG GWA G+GR GS+ GPL G L L H+++ ++++A +P Sbjct: 362 LTLNAFA-SNFYPAQVRATGTGWALGVGRFGSILGPLFGSLLLGMHISVENIFMLAAIPA 420 Query: 335 VAAAI 339 AA+ Sbjct: 421 GLAAL 425 >Z3394 [GEPR] COG0477 Permeases of the major facilitator superfamily EcZ Escherichia coli O157:H7 EDL933 Length = 452 Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 145 YSYVSDQRKKGSVKELFSQGFLGPTILLWIACFFNVLIIYFVISWIPSLLRTTELTRDAG 204 Y S KGS+++LF L T++LW+ F ++LIIY + SW+P+LL + Sbjct: 232 YLIESASVTKGSIRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHA 291 Query: 205 VLAVTAFSFGGMIGSLAQGALMNRFGVRRFILMEFVACLCCFGALSAVSSNL-IFSVALF 263 AF GG +G+LA G LM++F R + + + C + L + ++A+F Sbjct: 292 SWVTAAFQIGGTLGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIF 351 Query: 264 GLLGFMVNGIQAGLNVFAIEKIYPLSIRATGIGWAGGIGRIGSMTGPLLGGLFLTFHLTI 323 G G ++G Q GLN +YP RATG+ W+ IGR G++ G L GG+ + + + Sbjct: 352 G-TGIGISGSQVGLNALT-ATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSF 409 Query: 324 NQVYLMALLPVVAAAI 339 + ++ + +P +A+ Sbjct: 410 DTLFFIIAVPAAISAV 425 >ECs3031 [GEPR] COG0477 Permeases of the major facilitator superfamily Ecs Escherichia coli O157:H7 Length = 452 Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 103/196 (52%), Gaps = 3/196 (1%) Query: 145 YSYVSDQRKKGSVKELFSQGFLGPTILLWIACFFNVLIIYFVISWIPSLLRTTELTRDAG 204 Y S KGS+++LF L T++LW+ F ++LIIY + SW+P+LL + Sbjct: 232 YLIESASVTKGSIRQLFMGRQLPITLMLWVVFFMSLLIIYLLSSWMPTLLNHRGIDLQHA 291 Query: 205 VLAVTAFSFGGMIGSLAQGALMNRFGVRRFILMEFVACLCCFGALSAVSSNL-IFSVALF 263 AF GG +G+LA G LM++F R + + + C + L + ++A+F Sbjct: 292 SWVTAAFQIGGTLGALALGVLMDKFNPFRVLTLSYAIGAICIVMIGLSQDGLWLMALAIF 351 Query: 264 GLLGFMVNGIQAGLNVFAIEKIYPLSIRATGIGWAGGIGRIGSMTGPLLGGLFLTFHLTI 323 G G ++G Q GLN +YP RATG+ W+ IGR G++ G L GG+ + + + Sbjct: 352 G-TGIGISGSQVGLNALT-ATLYPTQSRATGVSWSNAIGRCGAIVGSLSGGVMMAMNFSF 409 Query: 324 NQVYLMALLPVVAAAI 339 + ++ + +P +A+ Sbjct: 410 DTLFFIIAVPAAISAV 425 >RSc1093 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 454 Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 17/198 (8%) Query: 157 VKELFSQGFLGPTILLWIACFFNVLIIYFVISWIPSLLRTTELTRDAGVLAVTAFSFGGM 216 V++LF F T+LLW F ++LI+Y + +W+P+L+ + + + GG Sbjct: 250 VRQLFLPAFRTGTLLLWSVFFMSLLIVYLMTNWLPTLIHSGGVALALASRIAVMYQLGGT 309 Query: 217 IGSLAQGALMNRFGVRRFILMEFVACLCC-------FGALSAVSSNLIFSVALFGLLGFM 269 +G+L G +M+R+ LCC F L+ VS + ++A+ G +GF Sbjct: 310 VGALVIGRMMDRY--------PATVVLCCTYGLGAGFLVLTGVSQGTMLAIAVTG-VGFC 360 Query: 270 VNGIQAGLNVFAIEKIYPLSIRATGIGWAGGIGRIGSMTGPLLGGLFLTFHLTINQVYLM 329 ++G Q G N FA + YP + R TGI WA GIGR+GS+ G L+GG+ L ++ ++L+ Sbjct: 361 ISGSQIGANAFA-AQFYPTASRVTGISWALGIGRLGSVCGALIGGVLLAANIGFQLLFLL 419 Query: 330 ALLPVVAAAIATFFNKSK 347 +P A++A F ++ Sbjct: 420 VAVPAAIASLAIFLCGAQ 437 >RSp0896 [GEPR] COG0477 Permeases of the major facilitator superfamily Rso Ralstonia solanacearum Length = 458 Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 5/194 (2%) Query: 144 GYSYVSDQRKKGSV----KELFSQGFLGPTILLWIACFFNVLIIYFVISWIPSLLRTTEL 199 G +++ D+ + + LFS G T+LLW A F ++ + Y + SW+P ++R L Sbjct: 234 GVTFIGDRPAQEGAPFPGRNLFSDGMAQRTVLLWAAFFCSLFVFYLLTSWLPVVMRDQGL 293 Query: 200 TRDAGVLAVTAFSFGGMIGSLAQGALMNRFGVRRFILMEFVACLCCFGALSAVSSNLIFS 259 T GG IG++A LM+R G R ++ + A+ N+ Sbjct: 294 TLTEAARVGAMVPLGGTIGAIALALLMDRAGSPRALIAAYFCGAIAVAAIGLAIGNVAAL 353 Query: 260 VALFGLLGFMVNGIQAGLNVFAIEKIYPLSIRATGIGWAGGIGRIGSMTGPLLGGLFLTF 319 A+ ++GF + G Q G+N+ A ++YP RATG+ WA G+GR GS+TG L+GG +T Sbjct: 354 TAVVFVVGFGIAGAQNGINLLA-AQMYPTEARATGVSWALGVGRGGSITGSLVGGTLMTT 412 Query: 320 HLTINQVYLMALLP 333 ++ ++ + LP Sbjct: 413 VGSVQTLFGIIALP 426