BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0106.p         (78 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1851 [K] COG1846 Transcriptional regulators Rso Ralstonia sol...    74   7e-14
RSc1849 [K] COG1846 Transcriptional regulators Rso Ralstonia sol...    62   4e-10

>RSc1851 [K] COG1846 Transcriptional regulators Rso Ralstonia solanacearum
          Length = 155

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 51/77 (66%)

Query: 1   VQRTIDVLHKEGLVFFEDNPHHQKAKLVTLTKAGDAIYKKVSTIQTTWSNEMASGLDLQD 60
           VQR ++ L KEGLV FE NPHH++A+LV +T+ G   Y     +QT W N +A GL ++D
Sbjct: 74  VQRIVNDLEKEGLVAFEANPHHKRAQLVVMTEKGKQAYGAAMQLQTPWINGLAKGLAVED 133

Query: 61  LDRVIQVMRVLRERIDE 77
           +  + +V+  LR ++DE
Sbjct: 134 IKTMHKVIAALRVKLDE 150


>RSc1849 [K] COG1846 Transcriptional regulators Rso Ralstonia solanacearum
          Length = 157

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 49/77 (63%)

Query: 1   VQRTIDVLHKEGLVFFEDNPHHQKAKLVTLTKAGDAIYKKVSTIQTTWSNEMASGLDLQD 60
           VQR +  L ++G V F +NPHH++A LV LT +G  ++ +   +   W NE+A G+  +D
Sbjct: 74  VQRIVHDLARDGFVEFANNPHHRRAPLVMLTASGQNVHNRAVNLGAPWMNELARGIPPED 133

Query: 61  LDRVIQVMRVLRERIDE 77
           ++ + +V+  L+ ++++
Sbjct: 134 IEIMRRVLMALQTKLEK 150