BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0064.p (219 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0313 [E] COG0765 ABC-type amino acid transport system, permeas... 256 3e-68 DR0565 [E] COG0765 ABC-type amino acid transport system, permeas... 214 1e-55 CC1440 [E] COG0765 ABC-type amino acid transport system, permeas... 207 1e-53 ZyecS [E] COG0765 ABC-type amino acid transport system, permease... 194 1e-49 ECs2656 [E] COG0765 ABC-type amino acid transport system, permea... 194 1e-49 >PA0313 [E] COG0765 ABC-type amino acid transport system, permease component Pae Pseudomonas aeruginosa Length = 230 Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 135/209 (64%), Positives = 167/209 (79%) Query: 5 DLLRQAAPVMLRGVGYTLLFALSSMLGGLVLGFVLAVARIVPWKFVHWPAAVYVSLMRGT 64 +LL A P +L+G YT+LFA SM+ GL+LGF +AV R+ V AAVYVS RGT Sbjct: 16 ELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGT 75 Query: 65 PLLVQIFVVYYGLPSVGIEFSPLMAGVLTLSLNAGAYLSESLRGAILGVTRGQWSASYSL 124 PLLVQIFV+YYGLPSVGIEF+P+ AG+L L+LN AYLSES+RGAILG+ +GQW A S+ Sbjct: 76 PLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSV 135 Query: 125 GLTYPQTLRYVVVPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLSTKEIIAVTFRP 184 GLT+ QTL ++ PQA+R+AVPS+SN+LISLIKDTSL+SVITVTELML+TKE+IA TF+P Sbjct: 136 GLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQP 195 Query: 185 LPLYIAAAMVYWFLSICFEALQHRLEKKL 213 LPLY+AAA +YW LS FE +Q LE +L Sbjct: 196 LPLYLAAAGIYWLLSALFERVQKALENRL 224 >DR0565 [E] COG0765 ABC-type amino acid transport system, permease component Dra Deinococcus radiodurans Length = 226 Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 110/207 (53%), Positives = 153/207 (73%) Query: 9 QAAPVMLRGVGYTLLFALSSMLGGLVLGFVLAVARIVPWKFVHWPAAVYVSLMRGTPLLV 68 A P +L TL FAL++M+ GL LGF +A+AR+ ++ + ++VS +RGTPLLV Sbjct: 15 HALPTLLAATPVTLGFALAAMVLGLPLGFAVALARLSRLGWLRTLSGLFVSFIRGTPLLV 74 Query: 69 QIFVVYYGLPSVGIEFSPLMAGVLTLSLNAGAYLSESLRGAILGVTRGQWSASYSLGLTY 128 QIFV+YYGLPS+GI+FSP++ GV+ L+LNA AYLSE++R AIL + GQ A+ SLGL+ Sbjct: 75 QIFVIYYGLPSLGIQFSPVVGGVIALTLNAAAYLSETIRAAILSIPPGQREAATSLGLSG 134 Query: 129 PQTLRYVVVPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLSTKEIIAVTFRPLPLY 188 QT+R +++PQA R+A+PS+SNTLI L+KDTSLVSVITV EL+ S + +IA TF P Y Sbjct: 135 AQTMRLIILPQAARVALPSLSNTLIGLVKDTSLVSVITVVELLRSAQLVIARTFEPFGPY 194 Query: 189 IAAAMVYWFLSICFEALQHRLEKKLGR 215 +AAA++YW +S E +Q LE++ R Sbjct: 195 LAAALIYWLVSSLLEVVQRALERRFSR 221 >CC1440 [E] COG0765 ABC-type amino acid transport system, permease component Ccr Caulobacter vibrioides Length = 219 Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 106/214 (49%), Positives = 142/214 (66%) Query: 5 DLLRQAAPVMLRGVGYTLLFALSSMLGGLVLGFVLAVARIVPWKFVHWPAAVYVSLMRGT 64 DLLRQ+AP++L+G GYT++ ++ M G+VLGF+LA+ R+ + WPA VYVS RGT Sbjct: 6 DLLRQSAPLLLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGT 65 Query: 65 PLLVQIFVVYYGLPSVGIEFSPLMAGVLTLSLNAGAYLSESLRGAILGVTRGQWSASYSL 124 PLLVQ+F++YYGLP G+E PL+A + SLN AY E LR AI V +GQW A+ L Sbjct: 66 PLLVQLFLIYYGLPQFGLEMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAASVL 125 Query: 125 GLTYPQTLRYVVVPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLSTKEIIAVTFRP 184 G++ QTLR V++PQA R AV +SN+ ISL+KDTSL + I V EL + I A T+ Sbjct: 126 GMSRGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEI 185 Query: 185 LPLYIAAAMVYWFLSICFEALQHRLEKKLGRAHQ 218 LY+AAA +YW LS A Q RLE++ + Sbjct: 186 FTLYLAAAAIYWILSTILAAAQTRLERRAAEGRR 219 >ZyecS [E] COG0765 ABC-type amino acid transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 222 Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 137/207 (66%) Query: 12 PVMLRGVGYTLLFALSSMLGGLVLGFVLAVARIVPWKFVHWPAAVYVSLMRGTPLLVQIF 71 P +L+G GYTL ++ M GL+LGF+LA+ R+ P V W A Y+S+ RGTPL+ Q+F Sbjct: 13 PFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLF 72 Query: 72 VVYYGLPSVGIEFSPLMAGVLTLSLNAGAYLSESLRGAILGVTRGQWSASYSLGLTYPQT 131 ++YYGLP GIE P+ + ++ LSLN AY +E+LR AI + +GQW A+ S+G+T QT Sbjct: 73 MIYYGLPQFGIELDPIPSAMIGLSLNTAAYTAETLRAAISSIDKGQWEAAASIGMTPWQT 132 Query: 132 LRYVVVPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLSTKEIIAVTFRPLPLYIAA 191 +R ++PQA R+A+P +SN+ ISL+KDTSL + I V EL + I + T +Y+AA Sbjct: 133 MRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192 Query: 192 AMVYWFLSICFEALQHRLEKKLGRAHQ 218 +++YW ++ LQ+ E +L R + Sbjct: 193 SLIYWIMATVLSTLQNHFENQLNRQER 219 >ECs2656 [E] COG0765 ABC-type amino acid transport system, permease component Ecs Escherichia coli O157:H7 Length = 222 Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 137/207 (66%) Query: 12 PVMLRGVGYTLLFALSSMLGGLVLGFVLAVARIVPWKFVHWPAAVYVSLMRGTPLLVQIF 71 P +L+G GYTL ++ M GL+LGF+LA+ R+ P V W A Y+S+ RGTPL+ Q+F Sbjct: 13 PFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLF 72 Query: 72 VVYYGLPSVGIEFSPLMAGVLTLSLNAGAYLSESLRGAILGVTRGQWSASYSLGLTYPQT 131 ++YYGLP GIE P+ + ++ LSLN AY +E+LR AI + +GQW A+ S+G+T QT Sbjct: 73 MIYYGLPQFGIELDPIPSAMIGLSLNTAAYTAETLRAAISSIDKGQWEAAASIGMTPWQT 132 Query: 132 LRYVVVPQAIRIAVPSMSNTLISLIKDTSLVSVITVTELMLSTKEIIAVTFRPLPLYIAA 191 +R ++PQA R+A+P +SN+ ISL+KDTSL + I V EL + I + T +Y+AA Sbjct: 133 MRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192 Query: 192 AMVYWFLSICFEALQHRLEKKLGRAHQ 218 +++YW ++ LQ+ E +L R + Sbjct: 193 SLIYWIMATVLSTLQNHFENQLNRQER 219