BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0015.0062.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0314 [ET] COG0834 ABC-type amino acid transport/signal transdu... 258 9e-69 DR0564 [ET] COG0834 ABC-type amino acid transport/signal transdu... 196 3e-50 YPO1846 [ET] COG0834 ABC-type amino acid transport/signal transd... 171 1e-42 fliY [ET] COG0834 ABC-type amino acid transport/signal transduct... 168 7e-42 ZfliY [ET] COG0834 ABC-type amino acid transport/signal transduc... 168 1e-41 >PA0314 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Pae Pseudomonas aeruginosa Length = 256 Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 127/205 (61%), Positives = 163/205 (79%), Gaps = 4/205 (1%) Query: 12 LLAGLLLAASVSATVGAHAADLLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFEVDV 71 L LL+ S++A + AHA +LLD V RG L++ALEG YPPFNFK + +LTGFE ++ Sbjct: 3 FLPRLLMLVSLAAPL-AHA-ELLDDVHQRGALRIALEGTYPPFNFK--QGGKLTGFETEL 58 Query: 72 AKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLSSAQ 131 +LLAA L +KPEF TTEWSGILAGL +GKYD+ +NQV + ++R+K FDFS+PYT+SSAQ Sbjct: 59 GELLAAELAVKPEFVTTEWSGILAGLQSGKYDIALNQVSVNEQRRKVFDFSEPYTISSAQ 118 Query: 132 LIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAKSVPGIDVKTYPGSPEYLSDLASGRI 191 LIVR DE R+FKSLEDLKG KLG+GQGTN+ AKSV G++V+TYPG+PEYL DLAS RI Sbjct: 119 LIVRADETRQFKSLEDLKGLKLGVGQGTNYADLAKSVAGVNVRTYPGAPEYLQDLASKRI 178 Query: 192 DAALNDSLLVGYLLKSSNLPLKGGS 216 DAALND LL+ + ++ + LP+K G+ Sbjct: 179 DAALNDRLLIPFAIREAKLPVKPGA 203 >DR0564 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Dra Deinococcus radiodurans Length = 261 Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 95/175 (54%), Positives = 125/175 (71%), Gaps = 1/175 (0%) Query: 40 RGTLKVALEGNYPPFNFKDPKTSELTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGA 99 +GTLK+A+EG YPPF K+ + EL GF+VD+AK +A +L LKPEF TEWSGILAGL A Sbjct: 35 QGTLKIAMEGTYPPFTSKN-EQGELVGFDVDIAKAVAQKLNLKPEFVLTEWSGILAGLQA 93 Query: 100 GKYDVIINQVGITDERQKAFDFSDPYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGT 159 KYDVI+NQVGIT ERQ + FS PY S ++IV K+ +SL DLKGK++G G+ Sbjct: 94 NKYDVIVNQVGITPERQNSIGFSQPYAYSRPEIIVAKNNTFNPQSLADLKGKRVGSTLGS 153 Query: 160 NFEQKAKSVPGIDVKTYPGSPEYLSDLASGRIDAALNDSLLVGYLLKSSNLPLKG 214 N+E++ I + TYPG+PE L+DL +GRIDAA ND L+V Y++ LP++G Sbjct: 154 NYEKQLIDTGDIKIVTYPGAPEILADLVAGRIDAAYNDRLVVNYIINDQKLPVRG 208 >YPO1846 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Ype Yersinia pestis Length = 266 Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/219 (43%), Positives = 139/219 (63%), Gaps = 4/219 (1%) Query: 1 MAFTSFRKLSPLLAGLLLAASVSATVGAHAA-DLLDTVKARGTLKVALEGNYPPFNFKDP 59 M+F+ R+ +L + +A + V ++AA DLL+ VK RGTL V LEG YPPF+F+ Sbjct: 1 MSFSIVRR-RIVLGMVAVALATGLNVKSYAAGDLLEQVKQRGTLIVGLEGTYPPFSFQ-G 58 Query: 60 KTSELTGFEVDVAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAF 119 + +LTGFEVD A LA +G+K + T T+W G+LA L + + DV INQV I+DER+K + Sbjct: 59 EDGKLTGFEVDFANALAEHMGVKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKY 118 Query: 120 DFSDPYTLSSAQLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK-SVPGIDVKTYPG 178 DFS PYT+S Q++ +K + +F EDL+GKK+G+G G+N+EQ + ++ +D++TY Sbjct: 119 DFSTPYTVSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWLRENLKDVDIRTYDD 178 Query: 179 SPEYLSDLASGRIDAALNDSLLVGYLLKSSNLPLKGGSP 217 P DL GR DA L D L L+K +N L P Sbjct: 179 DPTKYQDLRVGRTDAILVDRLAALDLVKKTNDALAVAGP 217 >fliY [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Eco Escherichia coli K12 Length = 266 Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 94/200 (47%), Positives = 129/200 (64%), Gaps = 4/200 (2%) Query: 13 LAGLLLAASVSATVGAHAAD--LLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFEVD 70 L G++ A V+ AD LL+ VK RGTL V LEG YPPF+F+ +LTGFEV+ Sbjct: 11 LMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQ-GDDGKLTGFEVE 69 Query: 71 VAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLSSA 130 A+ LA LG++ T+W G+LA L + + DV+INQV I+DER+K +DFS PYT+S Sbjct: 70 FAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYTISGI 129 Query: 131 QLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK-SVPGIDVKTYPGSPEYLSDLASG 189 Q +V+K + K+ +DLKGKK+G+G GTN+E+ + +V G+DV+TY P DL G Sbjct: 130 QALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVG 189 Query: 190 RIDAALNDSLLVGYLLKSSN 209 RIDA L D L L+K +N Sbjct: 190 RIDAILVDRLAALDLVKKTN 209 >ZfliY [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain EcZ Escherichia coli O157:H7 EDL933 Length = 266 Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/200 (46%), Positives = 129/200 (64%), Gaps = 4/200 (2%) Query: 13 LAGLLLAASVSATVGAHAAD--LLDTVKARGTLKVALEGNYPPFNFKDPKTSELTGFEVD 70 L G++ A ++ AD LL+ VK RGTL V LEG YPPF+F+ +LTGFEV+ Sbjct: 11 LMGVMAVALIAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQ-GDDGKLTGFEVE 69 Query: 71 VAKLLAARLGLKPEFTTTEWSGILAGLGAGKYDVIINQVGITDERQKAFDFSDPYTLSSA 130 A+ LA LG++ T+W G+LA L + + DV+INQV I+DER+K +DFS PYT+S Sbjct: 70 FAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYTISGI 129 Query: 131 QLIVRKDEKREFKSLEDLKGKKLGLGQGTNFEQKAK-SVPGIDVKTYPGSPEYLSDLASG 189 Q +V+K + K+ +DLKGKK+G+G GTN+E+ + +V G+DV+TY P DL G Sbjct: 130 QALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVG 189 Query: 190 RIDAALNDSLLVGYLLKSSN 209 RIDA L D L L+K +N Sbjct: 190 RIDAILVDRLAALDLVKKTN 209