BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0015.0041.p         (104 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMA0848 [M] COG1210 UDP-glucose pyrophosphorylase NmA Neisseria ...    85   5e-17
NMB0638 [M] COG1210 UDP-glucose pyrophosphorylase Nme Neisseria ...    84   5e-17
RSp0006 [M] COG1210 UDP-glucose pyrophosphorylase Rso Ralstonia ...    84   9e-17
RSc2237 [M] COG1210 UDP-glucose pyrophosphorylase Rso Ralstonia ...    83   1e-16
XF2432 [M] COG1210 UDP-glucose pyrophosphorylase Xfa Xylella fas...    72   3e-13

>NMA0848 [M] COG1210 UDP-glucose pyrophosphorylase NmA Neisseria
           meningitidis Z2491
          Length = 289

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 47/59 (79%)

Query: 41  EIQLTDGIAALMHAQTVLAYRYEGQRYDCGSKLGYLKATVAMGMKHPETGAAFTEYLKQ 99
           EIQLTDGIA L+  + VLA+ +EG RYDCGSKLGYL+ATVA G+KHPETG  F   L++
Sbjct: 227 EIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETGEPFRRLLEK 285



 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 35/37 (94%)

Query: 3  KRIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLI 39
          K I+KAVFPVAG+G+RFLPATKA PKEMLPIVDKPLI
Sbjct: 2  KPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLI 38


>NMB0638 [M] COG1210 UDP-glucose pyrophosphorylase Nme Neisseria
           meningitidis MC58
          Length = 289

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 47/59 (79%)

Query: 41  EIQLTDGIAALMHAQTVLAYRYEGQRYDCGSKLGYLKATVAMGMKHPETGAAFTEYLKQ 99
           EIQLTDGIA L+  + VLA+ +EG RYDCGSKLGYL+ATVA G+KHPETG  F   L++
Sbjct: 227 EIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETGEPFRRLLEK 285



 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 35/37 (94%)

Query: 3  KRIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLI 39
          K I+KAVFPVAG+G+RFLPATKA PKEMLPIVDKPLI
Sbjct: 2  KPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLI 38


>RSp0006 [M] COG1210 UDP-glucose pyrophosphorylase Rso Ralstonia
           solanacearum
          Length = 321

 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 43/57 (75%)

Query: 41  EIQLTDGIAALMHAQTVLAYRYEGQRYDCGSKLGYLKATVAMGMKHPETGAAFTEYL 97
           EIQLTD I  LM  + +LAYRY GQR+DCGSK GYL+ATV + ++HPE GA F  YL
Sbjct: 229 EIQLTDAIQRLMAEEQILAYRYRGQRFDCGSKFGYLQATVELALRHPEVGADFEAYL 285



 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 37/39 (94%)

Query: 1  MSKRIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLI 39
          M+++I KAVFPVAGLG+RFLPATKA PKEMLPIVDKPLI
Sbjct: 1  MNEKITKAVFPVAGLGTRFLPATKASPKEMLPIVDKPLI 39


>RSc2237 [M] COG1210 UDP-glucose pyrophosphorylase Rso Ralstonia
           solanacearum
          Length = 289

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 44/57 (77%)

Query: 41  EIQLTDGIAALMHAQTVLAYRYEGQRYDCGSKLGYLKATVAMGMKHPETGAAFTEYL 97
           E+QLTD I +L+ A+ VLAYRY+G RYDCGSKLGYLKATV + +KH E    F EYL
Sbjct: 230 ELQLTDAIQSLLSAEQVLAYRYDGVRYDCGSKLGYLKATVELALKHKEVAEEFREYL 286



 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 35/37 (94%)

Query: 3  KRIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLI 39
          +R+ KAVFPVAGLG+RFLPATKA PKEMLP+VDKPLI
Sbjct: 2  QRVTKAVFPVAGLGTRFLPATKASPKEMLPVVDKPLI 38


>XF2432 [M] COG1210 UDP-glucose pyrophosphorylase Xfa Xylella fastidiosa
          9a5c
          Length = 296

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 36/39 (92%)

Query: 1  MSKRIKKAVFPVAGLGSRFLPATKAQPKEMLPIVDKPLI 39
          M KRI+KAVFPVAGLG+RFLPATK  PKEMLPI+DKPLI
Sbjct: 1  MIKRIRKAVFPVAGLGTRFLPATKTIPKEMLPIIDKPLI 39



 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 42/59 (71%)

Query: 41  EIQLTDGIAALMHAQTVLAYRYEGQRYDCGSKLGYLKATVAMGMKHPETGAAFTEYLKQ 99
           EIQLTD IA L+  + V AYR++G+R+DCG+ +G ++AT+ + ++H + G A  E L+ 
Sbjct: 230 EIQLTDAIAELLKYERVDAYRFQGRRFDCGAHIGLIEATLHLALEHRKHGQAVREILRD 288