BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0203.p (420 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value slr0447 [E] COG0683 ABC-type branched-chain amino acid transport... 366 e-101 all1951 [E] COG0683 ABC-type branched-chain amino acid transport... 357 3e-98 DRA0320 [E] COG0683 ABC-type branched-chain amino acid transport... 344 3e-94 BH0251 [E] COG0683 ABC-type branched-chain amino acid transport ... 338 2e-92 Cgl0906 [E] COG0683 ABC-type branched-chain amino acid transport... 325 1e-88 >slr0447 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Syn Synechocystis Length = 446 Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust. Identities = 201/415 (48%), Positives = 269/415 (64%), Gaps = 16/415 (3%) Query: 14 RRKIMM--GIVAGAAGAAMAFPGLAMAQQFPTAKVN---TTKLAITDTEVTVGQLHSATG 68 RRK ++ GA+ A G PTA+ TT A T + VG LHS +G Sbjct: 7 RRKFLLYGSATLGASLLLKACGGGTEPTTEPTAEPTESPTTGTAPTGEPIKVGLLHSLSG 66 Query: 69 TMAISETGSIQAERLAIDQINSMGGILGRKIKIIQEDGASDWPTFAEKAKKLLENDHVAA 128 TMAISET ++A LAI++IN+ GG+LGR I+ I+EDGASDWPTFAEKA KL++ D V Sbjct: 67 TMAISETTVVEAAELAIEEINAAGGVLGRPIEAIKEDGASDWPTFAEKAAKLIDQDKVPV 126 Query: 129 VFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGLNWVAKE 188 VFGCWTSASRKAVLPVFE N +L+YP YEG E SKN+FYTG QQ+ ++W+ E Sbjct: 127 VFGCWTSASRKAVLPVFEAKNHMLWYPVQYEGQECSKNIFYTGAAPNQQIEPAVDWLL-E 185 Query: 189 KKAKTFFLIGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINKIKLKKP 248 K FFL+GSDY++PRT+N I ++ ++ G +GE+Y PLGNT+ +I KI+ P Sbjct: 186 NKGNKFFLVGSDYVFPRTANTIIKEQLK-AKGGETLGEDYLPLGNTEVTPIITKIREALP 244 Query: 249 D--VIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYASMKY 306 D VIF + G SNVAF+KQ++AAG+T ++++SV E+E+ IG E + G +AS Y Sbjct: 245 DGGVIFNTLNGDSNVAFFKQIQAAGLTPDKYPVMSVSVAEEEVRQIGKEYLLGQFASWNY 304 Query: 307 FQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSF-----DVDKV 361 FQS+D P N+KFVA FKAK+G + V D +AAY+ +LWKAAVE AG ++KV Sbjct: 305 FQSVDTPANQKFVAAFKAKYGEDRVTNDPMEAAYISVYLWKAAVEAAGDVGETPEGLEKV 364 Query: 362 VAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQKDGQFKVIYESD-LIEPNPF 415 AA+ G APEG V + NHH+ RIGE +GQF +++ SD ++P P+ Sbjct: 365 RAAAIGKTFD-APEGMVTMQPNHHISKTVRIGEVNDEGQFTIVWSSDGPVDPIPW 418 >all1951 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Nos Nostoc sp. PCC 7120 Length = 438 Score = 357 bits (916), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 183/361 (50%), Positives = 249/361 (68%), Gaps = 6/361 (1%) Query: 58 VTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGRKIKIIQEDGASDWPTFAEKA 117 + +G LHS +GTM+ISE + AE+LAI +IN+ GG+LG++I+ I EDGAS+W TF EKA Sbjct: 55 IKIGILHSLSGTMSISEKSVVDAEKLAIKEINAAGGVLGKQIEAIVEDGASNWDTFREKA 114 Query: 118 KKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQ 177 KL++ D VA VFGCWTSASRK V PVFE + +L+YP YEG E SKN+FYTG QQ Sbjct: 115 TKLIDQDKVAVVFGCWTSASRKNVKPVFESKDHMLWYPVQYEGQECSKNIFYTGAAPNQQ 174 Query: 178 VLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFG 237 + ++W+ K K K FFL+GSDY++PRT+N I + +E L G VGE+Y PLGNT+ Sbjct: 175 IEPSVDWLLKN-KGKEFFLVGSDYVFPRTANTIIKAQLE-ALGGKTVGEDYLPLGNTEVT 232 Query: 238 SLINKIKLKKPD--VIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGE 295 +I+KIK P+ VI+ + G SNVAF+KQLK AG+T +++S+ E+E+ IG E Sbjct: 233 PIISKIKQALPNGGVIYNTLNGDSNVAFFKQLKGAGLTPDKHPSMSVSIAEEEVKAIGVE 292 Query: 296 NVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGS 355 ++G YA+ YFQ++D P NKKFV FK ++GA+ V D +AAY+ +LWK +VEKAGS Sbjct: 293 YLKGHYAAWNYFQTVDTPANKKFVEAFKKEYGADRVTNDPMEAAYIAVYLWKQSVEKAGS 352 Query: 356 FDVDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQKDGQFKVIYESDL-IEPNP 414 D+ KV AA+ G + APEG V V+ NHH+ RIGE + DG F +IY + +EP P Sbjct: 353 PDLAKVRAAAYGQTID-APEGKVTVNTNHHISKIVRIGEVRDDGLFDIIYATPAPVEPVP 411 Query: 415 F 415 + Sbjct: 412 W 412 >DRA0320 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Dra Deinococcus radiodurans Length = 390 Score = 344 bits (882), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 186/361 (51%), Positives = 239/361 (66%), Gaps = 4/361 (1%) Query: 58 VTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGRKIKIIQEDGASDWPTFAEKA 117 V VG LHS TGTMAISE A +LA+D+IN+ GG+LG+K+ I++EDGASDWPTFA KA Sbjct: 24 VKVGVLHSLTGTMAISELTVANATQLAVDEINAAGGVLGKKLVIVKEDGASDWPTFATKA 83 Query: 118 KKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQ 177 +KLL D VAAVFG WTSASRKA+LPVFEK+ GLL+YP +EG E S N+ YTG + QQ Sbjct: 84 EKLLTQDRVAAVFGGWTSASRKAMLPVFEKNKGLLFYPVQFEGNECSPNIIYTGAQPNQQ 143 Query: 178 VLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFG 237 L L W A K K FL+GSDY++PRT+N I +KHI + GEEY LG T+F Sbjct: 144 ALPALEW-ALSKGYKNIFLLGSDYVYPRTANLILKKHIA-ASGAKLAGEEYVALGGTEFS 201 Query: 238 SLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENV 297 S+INKIK KP VI + G SNV+F+KQ +AAG +A T +++ S+ E E IG + + Sbjct: 202 SVINKIKAAKPQVIINTLNGDSNVSFFKQYQAAGYSAATLPVISFSIAEQEAQAIGPQLL 261 Query: 298 EGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFD 357 +G YA+ YFQSL NKKFVA +K K+GA +V+ D AYL +LWKAAVEKA SFD Sbjct: 262 QGQYATWNYFQSLPGAANKKFVAAYKKKYGAGAVVTDPMAHAYLDVYLWKAAVEKAKSFD 321 Query: 358 VDKVVAASPGLELKTAPEGYVKVHANHHLWSKTRIGEAQKDGQFKVIYESD-LIEPNPFP 416 V A G+ L + P G V V + L G++ GQFK + +S +++P P+ Sbjct: 322 PVAVRKAIVGVSLNS-PLGKVTVDKSGSLTQGVYTGQSGAGGQFKTVAQSRGVVQPQPYD 380 Query: 417 K 417 K Sbjct: 381 K 381 >BH0251 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bha Bacillus halodurans Length = 419 Score = 338 bits (866), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 171/374 (45%), Positives = 248/374 (66%), Gaps = 5/374 (1%) Query: 49 TKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGRKIKIIQEDGAS 108 T++ + ++ VG LHS +GTMA+SET AE LAI++IN GG+LG+++ I EDGAS Sbjct: 37 TEVEVGSDQIAVGILHSLSGTMAMSETSVRDAELLAIEEINEAGGVLGKELVPIIEDGAS 96 Query: 109 DWPTFAEKAKKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVF 168 + FAE+A KLL+ D VA +FG WTSASRKA+LPV E++NGLL+YP YEG+E S N+F Sbjct: 97 EPNIFAERATKLLQQDEVAVIFGGWTSASRKAMLPVVEENNGLLFYPVQYEGMEASPNIF 156 Query: 169 YTGQEATQQVLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIENVLKGSVVGEEY 228 Y G QQ++ + W+ E + FFL+GSDY++PR +N I + +E+ ++V E+Y Sbjct: 157 YAGAAPNQQIVPAVEWLL-ENRGTEFFLLGSDYVFPRLANAIIKAQLES-HGATLVDEQY 214 Query: 229 YPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDE 288 PLG+T + ++I++I+ +P VIF + G SNVAF+KQL AG+TA ++++SV E+E Sbjct: 215 TPLGHTDYNTIISRIRESEPTVIFNTLNGDSNVAFFKQLADAGITADDVTVMSVSVAEEE 274 Query: 289 MLGIGGENVEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKA 348 + GIG + + G AS YFQ+ D P N FV + FG + V GD +A YL LW Sbjct: 275 IRGIGADVLAGHLASWNYFQTTDTPENDTFVTAYIKSFGDDRVTGDPIEAGYLMVHLWAQ 334 Query: 349 AVEKAGSFDVDKVVAASPGLELKTAPEGYVKVHA-NHHLWSKTRIGEAQKDGQFKVIYES 407 AVE AG+ D++ V A+ +E +AP G VKV N HL+ RIGE Q DGQF+ ++ S Sbjct: 335 AVEAAGTTDIEAVREAASTIEF-SAPGGLVKVDGDNQHLYKTVRIGEVQADGQFEEVWNS 393 Query: 408 -DLIEPNPFPKGYQ 420 + ++P+PF + Y+ Sbjct: 394 GEPVKPDPFLEDYE 407 >Cgl0906 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Cgl Corynebacterium glutamicum Length = 423 Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 161/366 (43%), Positives = 243/366 (66%), Gaps = 7/366 (1%) Query: 58 VTVGQLHSATGTMAISETGSIQAERLAIDQINSMGGILGRKIKIIQEDGASDWPTFAEKA 117 + +G ++S +GTMAISET Q+ +A D+IN+ GG+LG++++I +EDGAS+ TFAE++ Sbjct: 53 IKIGFINSLSGTMAISETTVNQSLHMAADEINAAGGVLGKQLEISEEDGASEPATFAERS 112 Query: 118 KKLLENDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQ 177 ++L++ + VAAVFG WTSASRKA+LPVFE +N LL+YP YEG+E S N+FYTG QQ Sbjct: 113 QRLIQQECVAAVFGGWTSASRKAMLPVFEGNNSLLFYPVQYEGMESSPNIFYTGATTNQQ 172 Query: 178 VLAGLNWVAKEKKAKTFFLIGSDYIWPRTSNKIARKHIE-NVLKGSVVGEEYYPLGNTQF 236 ++ L+++ +E FL+GSDY++PRT+N I + + E N ++ +VGE+Y PLG+T F Sbjct: 173 IIPALDYL-RENGLNRLFLVGSDYVFPRTANSIIKDYAEANGME--IVGEDYAPLGSTDF 229 Query: 237 GSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGEN 296 ++ N+++ D +F + G SNVAF++Q + G A T ++++S+ E+E+ GIG N Sbjct: 230 TTIANRMRDSNADAVFNTLNGDSNVAFFRQYNSLGFNADTLPVMSVSIAEEEVGGIGTAN 289 Query: 297 VEGFYASMKYFQSLDNPNNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSF 356 +EG + Y+Q++D P N+ FV FK +G + V D +AAY +LWK VEKA SF Sbjct: 290 IEGQLVAWDYYQTIDTPENETFVENFKDLYGQDKVTSDPMEAAYTSLYLWKEMVEKADSF 349 Query: 357 DVDKVVAASPGLELKTAPEGYVKVHA-NHHLWSKTRIGEAQKDGQFKVIYESDL-IEPNP 414 DV + AA+ G APEG V V NHH+ RIG + DG I+E+D ++P+P Sbjct: 350 DVAAIQAAADGTTFD-APEGTVVVDGDNHHISKTPRIGRIRPDGLIDTIWETDSPVDPDP 408 Query: 415 FPKGYQ 420 + Y Sbjct: 409 YLSSYD 414