BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0179.p (198 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO3034_1 [C] COG0281 Malic enzyme Ype Yersinia pestis 316 2e-86 ECs3325_1 [C] COG0281 Malic enzyme Ecs Escherichia coli O157:H7 307 1e-83 maeB_1 [C] COG0281 Malic enzyme Eco Escherichia coli K12 307 1e-83 STM2472_1 [C] COG0281 Malic enzyme Sty Salmonella typhimurium LT2 306 1e-83 Z3719_1 [C] COG0281 Malic enzyme EcZ Escherichia coli O157:H7 ED... 304 8e-83 >YPO3034_1 [C] COG0281 Malic enzyme Ype Yersinia pestis Length = 434 Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 148/196 (75%), Positives = 173/196 (88%) Query: 1 MNTTDRQAALDYHEFPTPGKITVNASKPLVTQRDLTLAYTPGVAAACEEIVADPLNAFRY 60 M+ +Q+ALD+H+FP PGKI V+ +KPL TQRDL LAY+PGVAA C EI ADPL A++Y Sbjct: 1 MDEQLKQSALDFHQFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIAADPLAAYKY 60 Query: 61 TARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDVFDIEINETDPDKLV 120 TARGNLV VI+NGTAVLGLGNIGALA KPVMEGK VLFKKF+GIDVFDIE++E DPDKL+ Sbjct: 61 TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFSGIDVFDIEVDELDPDKLI 120 Query: 121 TIIAGLEATFGGINLEDIKAPECFTVERQLRDRMKIPVFHDDQHGTAITVSAAFINGLKV 180 IIA LE TFGGINLEDIKAPECF +E++LR+RMKIPVFHDDQHGTAI +AA +NGL+V Sbjct: 121 DIIASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTAIICTAAVLNGLRV 180 Query: 181 VKKDITEVKVVVSGAG 196 VKKDI++VK+VVSGAG Sbjct: 181 VKKDISDVKLVVSGAG 196 >ECs3325_1 [C] COG0281 Malic enzyme Ecs Escherichia coli O157:H7 Length = 434 Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 142/196 (72%), Positives = 170/196 (86%) Query: 1 MNTTDRQAALDYHEFPTPGKITVNASKPLVTQRDLTLAYTPGVAAACEEIVADPLNAFRY 60 M+ +Q+ALD+HEFP PGKI V+ +KPL TQRDL LAY+PGVAA C EI DPL A++Y Sbjct: 1 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY 60 Query: 61 TARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDVFDIEINETDPDKLV 120 TARGNLV VI+NGTAVLGLGNIGALA KPVMEGK VLFKKFAGIDVFDIE++E DPDK + Sbjct: 61 TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI 120 Query: 121 TIIAGLEATFGGINLEDIKAPECFTVERQLRDRMKIPVFHDDQHGTAITVSAAFINGLKV 180 ++A LE TFGGINLEDIKAPECF +E++LR+RM IPVFHDDQHGTAI +AA +NGL+V Sbjct: 121 EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV 180 Query: 181 VKKDITEVKVVVSGAG 196 V+K+I++V++VVSGAG Sbjct: 181 VEKNISDVRMVVSGAG 196 >maeB_1 [C] COG0281 Malic enzyme Eco Escherichia coli K12 Length = 434 Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 142/196 (72%), Positives = 170/196 (86%) Query: 1 MNTTDRQAALDYHEFPTPGKITVNASKPLVTQRDLTLAYTPGVAAACEEIVADPLNAFRY 60 M+ +Q+ALD+HEFP PGKI V+ +KPL TQRDL LAY+PGVAA C EI DPL A++Y Sbjct: 1 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY 60 Query: 61 TARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDVFDIEINETDPDKLV 120 TARGNLV VI+NGTAVLGLGNIGALA KPVMEGK VLFKKFAGIDVFDIE++E DPDK + Sbjct: 61 TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI 120 Query: 121 TIIAGLEATFGGINLEDIKAPECFTVERQLRDRMKIPVFHDDQHGTAITVSAAFINGLKV 180 ++A LE TFGGINLEDIKAPECF +E++LR+RM IPVFHDDQHGTAI +AA +NGL+V Sbjct: 121 EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV 180 Query: 181 VKKDITEVKVVVSGAG 196 V+K+I++V++VVSGAG Sbjct: 181 VEKNISDVRMVVSGAG 196 >STM2472_1 [C] COG0281 Malic enzyme Sty Salmonella typhimurium LT2 Length = 434 Score = 306 bits (785), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 142/196 (72%), Positives = 170/196 (86%) Query: 1 MNTTDRQAALDYHEFPTPGKITVNASKPLVTQRDLTLAYTPGVAAACEEIVADPLNAFRY 60 M+ +Q+ALD+HEFP PGKI V+ +KPL TQRDL LAY+PGVAA C EI DPL A++Y Sbjct: 1 MDEQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLAAYKY 60 Query: 61 TARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDVFDIEINETDPDKLV 120 TARGNLV VI+NGTAVLGLGNIGALA KPVMEGK VLFKKFAGIDVFDIE++E DPDK + Sbjct: 61 TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI 120 Query: 121 TIIAGLEATFGGINLEDIKAPECFTVERQLRDRMKIPVFHDDQHGTAITVSAAFINGLKV 180 ++A LE TFGGINLEDIKAPECF +E++LR+RM IPVFHDDQHGTAI +AA +NGL+V Sbjct: 121 NVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRV 180 Query: 181 VKKDITEVKVVVSGAG 196 V+K+I++V++VVSGAG Sbjct: 181 VEKNISDVRMVVSGAG 196 >Z3719_1 [C] COG0281 Malic enzyme EcZ Escherichia coli O157:H7 EDL933 Length = 434 Score = 304 bits (779), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 141/196 (71%), Positives = 169/196 (86%) Query: 1 MNTTDRQAALDYHEFPTPGKITVNASKPLVTQRDLTLAYTPGVAAACEEIVADPLNAFRY 60 M+ +Q+ALD+HEFP PGKI V+ +KPL TQRDL LAY+PGVAA C EI DPL A++Y Sbjct: 1 MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKY 60 Query: 61 TARGNLVGVITNGTAVLGLGNIGALASKPVMEGKAVLFKKFAGIDVFDIEINETDPDKLV 120 TARGNLV VI+NGTAVLGLGNIGALA KPVMEGK VLFKKFAGIDVFDIE++E DPDK + Sbjct: 61 TARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFI 120 Query: 121 TIIAGLEATFGGINLEDIKAPECFTVERQLRDRMKIPVFHDDQHGTAITVSAAFINGLKV 180 ++A LE TFGGINLEDIKAPECF +E++LR+RM IPVFHDDQHGTAI +AA +N L+V Sbjct: 121 EVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNXLRV 180 Query: 181 VKKDITEVKVVVSGAG 196 V+K+I++V++VVSGAG Sbjct: 181 VEKNISDVRMVVSGAG 196