BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0126.p (337 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0882 [C] COG1804 Predicted acyl-CoA transferases/carnitine deh... 504 e-142 BMEII1076 [C] COG1804 Predicted acyl-CoA transferases/carnitine ... 488 e-138 mlr6096 [C] COG1804 Predicted acyl-CoA transferases/carnitine de... 280 3e-75 TVN1161 [C] COG1804 Predicted acyl-CoA transferases/carnitine de... 214 3e-55 BMEII0224 [C] COG1804 Predicted acyl-CoA transferases/carnitine ... 207 4e-53 >PA0882 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Pae Pseudomonas aeruginosa Length = 400 Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust. Identities = 246/334 (73%), Positives = 274/334 (82%), Gaps = 2/334 (0%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWT 65 RPL+GITVVSLEHAIAAPFCTRQLAD+GARVIK+ERPGVGDFARGYDERVNGLSSHFVWT Sbjct: 8 RPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARGYDERVNGLSSHFVWT 67 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NRSK+SL+L+LK A+ +++KLL ADVLVQNLAPGAAA LGLS L + P LIVCD Sbjct: 68 NRSKQSLSLDLKQAEALPLLEKLLAGADVLVQNLAPGAAARLGLSYEALRERFPRLIVCD 127 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTA--DEQAKAGCSIADIAAGMYAYSHILA 183 ISGYGE GPY KKAYDLLIQSE GFLSVTG A +E AKAGCSIADIAAGMYAYS IL+ Sbjct: 128 ISGYGEGGPYEKKKAYDLLIQSEGGFLSVTGGAGPNEMAKAGCSIADIAAGMYAYSSILS 187 Query: 184 ALIKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGD 243 AL+ R R GEGS ID+SMLESL EWM +PMYYAYQ A P R+GA H+TIYPYGPF AGD Sbjct: 188 ALLLRERTGEGSRIDVSMLESLVEWMGYPMYYAYQDAPPPPRAGASHSTIYPYGPFPAGD 247 Query: 244 GKVVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQ 303 G VMLGLQNEREW+ FC+ VL+ P LA D RFS N +R NR ELR LI++ F L A Sbjct: 248 GGTVMLGLQNEREWRAFCDKVLRRPELADDERFSANFKRSANREELRALIVEAFAALPAA 307 Query: 304 EVVARLDQAQIANASVNTMQDLWEHPQLAARERW 337 EVVARL+QAQIA+A VN M +W HPQL AR+RW Sbjct: 308 EVVARLEQAQIASAHVNDMAGVWAHPQLQARQRW 341 >BMEII1076 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Bme Brucella melitensis Length = 405 Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust. Identities = 233/332 (70%), Positives = 267/332 (80%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWT 65 RPL+GITVVSLEHAIAAPF TRQLAD+GARVIKVERPGVGDFAR YD+RVNG++SHFVW Sbjct: 15 RPLDGITVVSLEHAIAAPFATRQLADLGARVIKVERPGVGDFARAYDDRVNGMASHFVWC 74 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NRSKESL ++LK D + I+ L+ +ADVLVQNLAPGAAA LGLSA L PHLIVCD Sbjct: 75 NRSKESLAIDLKHPDARGILHDLVSKADVLVQNLAPGAAARLGLSAEALRADCPHLIVCD 134 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILAAL 185 ISGYG +GPYRD+KAYDLLIQSEAGFLSVTGT DEQAKAG SIADIAAGMYAYS IL+AL Sbjct: 135 ISGYGSDGPYRDRKAYDLLIQSEAGFLSVTGTPDEQAKAGISIADIAAGMYAYSGILSAL 194 Query: 186 IKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDGK 245 + R R G+GSHI++SMLE+L EWM FP+YY Y G P R+GA HATI+PYGPF GDGK Sbjct: 195 LMRERTGQGSHIEVSMLEALGEWMGFPLYYTYGGKEPPPRTGASHATIFPYGPFPTGDGK 254 Query: 246 VVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQEV 305 VMLGLQNEREW +FCE VL PALAQD RF +N R NR L ++I+ F A+ + Sbjct: 255 TVMLGLQNEREWAIFCEKVLHQPALAQDERFVSNVLRVRNRDALTEIIVASFAASNAEAI 314 Query: 306 VARLDQAQIANASVNTMQDLWEHPQLAARERW 337 +LD+A IANA V TM ++W+HPQL AR RW Sbjct: 315 TMQLDEAGIANARVRTMAEVWDHPQLQARGRW 346 >mlr6096 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Mlo Mesorhizobium loti Length = 387 Score = 280 bits (717), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 143/324 (44%), Positives = 212/324 (65%), Gaps = 1/324 (0%) Query: 8 LEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYDERVNGLSSHFVWTNR 67 LEGITVV++E A+AAP+ + +LAD GARVIKVERP GDFAR YD+ V G S++FVW NR Sbjct: 5 LEGITVVAVEQAVAAPYASSRLADAGARVIKVERPE-GDFARNYDKLVRGQSAYFVWLNR 63 Query: 68 SKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCDIS 127 KES+ L+L+ +A++D L+ ADV +QNL PG+ LG ++A L R+ P LI CDIS Sbjct: 64 GKESVCLDLRLEADRAVLDTLIASADVFIQNLKPGSIQKLGFASADLRRRFPRLITCDIS 123 Query: 128 GYGENGPYRDKKAYDLLIQSEAGFLSVTGTADEQAKAGCSIADIAAGMYAYSHILAALIK 187 G+G+ GPY KAYDL++Q+E G ++TG A+ G S+ DI+AGM A+S IL AL Sbjct: 124 GFGDIGPYSHLKAYDLIVQAETGLCAITGNQQGPARVGVSVCDISAGMTAHSAILQALYH 183 Query: 188 RGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDGKVV 247 R GEG+ I +S+ +++ +WM+ P+ + +R+G +H ++ PYG + DGK V Sbjct: 184 REVTGEGTGIQVSLFDAVADWMNVPVLQNDYSSYHTVRAGVKHPSLAPYGAYRCADGKEV 243 Query: 248 MLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQEVVA 307 + +QN+REW FCE L+ P L + + F+ N R +RA+L ++I F+ L+ + + Sbjct: 244 IFSVQNDREWVNFCEKFLKQPGLTRASGFADNMERLGHRAQLDEIIERRFSELSCHQAMQ 303 Query: 308 RLDQAQIANASVNTMQDLWEHPQL 331 L+ A +A +N + D+ HP + Sbjct: 304 ELETAGLAYGRLNEVVDVSNHPHI 327 >TVN1161 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Tvo Thermoplasma volcanium Length = 399 Score = 214 bits (544), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 115/332 (34%), Positives = 191/332 (57%), Gaps = 5/332 (1%) Query: 6 RPLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGY-DERVNGLSSHFVW 64 +PL GI ++ A++ PF T L D+GA VIKVE P GD R + +NG S++F+ Sbjct: 3 KPLSGIKIIDFTRAMSGPFATMILGDLGAEVIKVESPE-GDETRSWVPPMMNGQSAYFLS 61 Query: 65 TNRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVC 124 NR+K+S+ ++LK ++G+ I +L++ +D++V+N PG A LG+S R N ++I C Sbjct: 62 VNRNKKSIVVDLKKSEGRDIALRLIEGSDIVVENFRPGVAEKLGISYEDAKRVNQNVIYC 121 Query: 125 DISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTAD-EQAKAGCSIADIAAGMYAYSHILA 183 ISGYG GPY +DL + + +G +S+TG + K G I DI GM+A I++ Sbjct: 122 SISGYGSTGPYMGLSGFDLSVMAFSGLMSITGEPNGGPVKFGVPIVDIVTGMFAAISIIS 181 Query: 184 ALIKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGD 243 AL R + GEG +ID +M++S ++ Y + P++ G+ H++I PY F D Sbjct: 182 ALRFRDKTGEGQYIDTAMIDSAVGILTHQATYFFATGKDPVKLGSAHSSIAPYQAFRTKD 241 Query: 244 GKVVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQ 303 G +V+ +++ W+ C+++ + P L QD RF TN R +NR EL +I T L+ Sbjct: 242 GYIVITA-GSQKIWENLCDAI-EMPELKQDPRFMTNELRVKNRYELVPVIEQYLTRLSTS 299 Query: 304 EVVARLDQAQIANASVNTMQDLWEHPQLAARE 335 + ++L + + + VNT+ + + Q+ R+ Sbjct: 300 QAYSKLTKYGVPCSPVNTVSEALKSDQVNYRD 331 >BMEII0224 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Bme Brucella melitensis Length = 454 Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 120/331 (36%), Positives = 174/331 (52%), Gaps = 3/331 (0%) Query: 7 PLEGITVVSLEHAIAAPFCTRQLADMGARVIKVERPGVGDFARGYD-ERVNGLSSHFVWT 65 PL GI V+ L +A P+ T LADMGA V K+E GD R + G S++F+ Sbjct: 52 PLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVPNYKGASTYFLCA 111 Query: 66 NRSKESLTLNLKDADGKAIIDKLLDEADVLVQNLAPGAAAGLGLSAAVLHRKNPHLIVCD 125 NR K+SL L+LK +G II +L +ADV+V+N G L + L NP ++ C Sbjct: 112 NRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNPGIVYCS 171 Query: 126 ISGYGENGPYRDKKAYDLLIQSEAGFLSVTGTAD-EQAKAGCSIADIAAGMYAYSHILAA 184 ISGYG+ GP + YD ++Q+E+G +S+TG D E + G ++ DI AGM A +LAA Sbjct: 172 ISGYGQTGPEAQRPGYDFVVQAESGLMSITGQIDGEPTRIGVAMTDIVAGMVATQSVLAA 231 Query: 185 LIKRGRDGEGSHIDLSMLESLTEWMSFPMYYAYQGASAPLRSGAEHATIYPYGPFTAGDG 244 L +R G G +ID+S+ E + G P R G H T+ PY F DG Sbjct: 232 LYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQIFECSDG 291 Query: 245 KVVMLGLQNEREWKVFCESVLQDPALAQDARFSTNSRRHENRAELRKLILDMFTPLTAQE 304 L + N+R++ + CE ++ P LA D RF T S R NRA L + + F T Q Sbjct: 292 AFA-LAVGNDRQFAILCERIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNTRQH 350 Query: 305 VVARLDQAQIANASVNTMQDLWEHPQLAARE 335 ++ + + V T+ + +E P + AR+ Sbjct: 351 WMSACLKMGVPAGQVKTVPEAFESPNVKARQ 381