BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0123.p         (167 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0878 [S] COG3777 Uncharacterized conserved protein Pae Pseudom...   129   2e-30
CC1109 Non COG                                                        100   2e-21
BMEII1075 [S] COG3777 Uncharacterized conserved protein Bme Bruc...    99   5e-21
SPBC1105.15c [S] COG3777 Uncharacterized conserved protein Spo S...    68   8e-12

>PA0878 [S] COG3777 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 275

 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/120 (57%), Positives = 80/120 (66%), Gaps = 5/120 (4%)

Query: 41  PVAPK----QAPAEADWRRRIEPDPVLLFRYSALTFNGHRIHYDRSYVTGVEGYPGLIVH 96
           P  PK    +A  E DWR  +EPDPVLLFRYSA+TFNGHRIHYD  YVT  EGYPGL+VH
Sbjct: 147 PTPPKLGGTEALPEGDWREALEPDPVLLFRYSAVTFNGHRIHYDWPYVTDAEGYPGLVVH 206

Query: 97  GPLIATLLVDLLGRSLPLARLLEFNFRAVGSLFDIEAFEICGKLSADGKRAELWAQNLRG 156
           GPLIATL +    R+ P ARL  F +R +  L   E FE+ G+L A GK AE+W  N  G
Sbjct: 207 GPLIATLALRAFCRANPQARLRRFAYRGLRPLICPEPFEVGGRLLAAGK-AEVWVGNGAG 265


>CC1109 Non COG
          Length = 265

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 6/110 (5%)

Query: 42  VAPKQAPAEADWRRRIEPDPVLLFRYSALTFNGHRIHYDRSYVTGVEGYPGLIVHGPLIA 101
           VA    P  A W +    DPVLLF +SA T N HRIHYD  Y T VEGYPGL+VHGPLIA
Sbjct: 148 VADSGPPPPAAWSQDTATDPVLLFAFSAATSNSHRIHYDLGYATQVEGYPGLVVHGPLIA 207

Query: 102 TLLVDLLGRSLPLARLLEFNFRAVGSLFDIEAFEICGKLSADGKRAELWA 151
            LL+D    ++P   +  F+FRA+   F  E     G+L  DG  AELWA
Sbjct: 208 LLLLD----AMPPRAVSRFSFRALKPAFAGETLTAEGRLIEDG--AELWA 251


>BMEII1075 [S] COG3777 Uncharacterized conserved protein Bme Brucella
           melitensis
          Length = 276

 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 7/113 (6%)

Query: 55  RRIEPDPVLLFRYSALTFNGHRIHYDRSYVTGVEGYPGLIVHGPLIATLLVDLLG--RSL 112
           R I P   LLFRYSALTFNGHRIHYD  YV  VE YPGLIVHGP+ AT+LV      R  
Sbjct: 168 RFITPSAPLLFRYSALTFNGHRIHYDAPYVRNVENYPGLIVHGPMQATMLVRFATEIRGK 227

Query: 113 PLARLLEFNFRAVGSLFDIEAFEICGKLSADGKRAELWAQNLRGELAMQAEAV 165
           P  R   F+FR++  LFD   F +      DG+  +LW     G +AM+A A+
Sbjct: 228 PPVR---FDFRSLSPLFDDADFTL--NAIDDGEGLKLWTSYANGPVAMEARAL 275


>SPBC1105.15c [S] COG3777 Uncharacterized conserved protein Spo
           Schizosaccharomyces pombe
          Length = 300

 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 59  PDPVLLFRYSALTFNGHRIHYDRSYVTGVEGYPGLIVHGPLIATLLVDLLGRSLPL--AR 116
           P P+++FRYSAL FN H IH++ +Y T  E YP L++ GPL+ T +++      P     
Sbjct: 191 PTPIMVFRYSALMFNAHMIHWNATYATKSENYPNLVLPGPLLVTSMLEYFRSVYPQMSKN 250

Query: 117 LLEFNFRAVGSLFDIEAFEICGKLSADGKRAELWAQNLRGEL 158
           +  F FR +   F  +   IC  +S  G    LW      +L
Sbjct: 251 MKRFEFRLLSPAFVNQPLRIC--ISETG---NLWIDRFTTDL 287