BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0090.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value alr2541 [E] COG0410 ABC-type branched-chain amino acid transport... 248 6e-66 DR1034 [E] COG0410 ABC-type branched-chain amino acid transport ... 248 1e-65 TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 244 1e-64 DR2118 [E] COG0410 ABC-type branched-chain amino acid transport ... 244 2e-64 FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 240 3e-63 >alr2541 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Nos Nostoc sp. PCC 7120 Length = 264 Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 126/238 (52%), Positives = 168/238 (70%), Gaps = 5/238 (2%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 +L I L YG ++ L I++ + KG+VVTLIG+NGAGK+TT+RAIS ++ PK G + Sbjct: 32 ILEIQELDVNYGGIQALKKINLTIQKGEVVTLIGANGAGKSTTLRAISKIVTPKNGQIIY 91 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G+++T + H++ + G+AH PEGRRV A +V DNLLLGA+ R + K DI ++ Sbjct: 92 SGRNITRRLPHEVVKFGIAHCPEGRRVLAKQTVLDNLLLGAYIRSNQTEIKADI----KQ 147 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ELFPRL +RQ QLAGTLSGGEQQMLA+ RA+M P+++LLDEPS+GLAP +V E+F Sbjct: 148 QFELFPRLAQRQNQLAGTLSGGEQQMLAIA-RALMSRPQLLLLDEPSLGLAPAIVREIFS 206 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLG 238 II L+ G+T+LLVEQ A AL +AD GYVLE G I++ G A L ND V+ AYLG Sbjct: 207 IIENLRATGVTILLVEQNANLALQIADRGYVLEAGSITLSGAASNLINDERVKKAYLG 264 >DR1034 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 252 Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 127/239 (53%), Positives = 173/239 (72%), Gaps = 6/239 (2%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 +L + N+ + YG++E L G++M V +G++V LIG NGAGKTTT+R ISGM+KPK G+VT Sbjct: 17 VLELQNVHSYYGQIEALKGLNMTVNEGEIVALIGGNGAGKTTTLRTISGMMKPKTGSVTY 76 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G++VTG SH++ G+AH PEGRR+F M+V +NL +GA+ K I +E Sbjct: 77 LGQNVTGVPSHQLIGRGMAHVPEGRRIFPQMTVRENLEVGAYT----VNDKAAINARIEE 132 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ELFPRL+ER++QL GT+SGGEQQMLA+ RA+M+ P+V+LLDEPSMGL+P+ VE +F Sbjct: 133 GFELFPRLRERESQLGGTMSGGEQQMLAIA-RALMIAPKVLLLDEPSMGLSPLFVENIFS 191 Query: 181 IILRL-KEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLG 238 II RL KE+G T+LLVEQ A+ AL +AD YVL+ G+I + G A + D V+ AYLG Sbjct: 192 IIERLNKERGTTILLVEQNASMALAIADRAYVLQTGEIKLSGNAQDIARDETVRKAYLG 250 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/238 (50%), Positives = 171/238 (71%), Gaps = 5/238 (2%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 +L + +L YG + + GI ++VP+G++VTLIG+NGAGKTTT+ AI+G+++ + G + Sbjct: 5 VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIF 64 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G+D+T + +H I R G+A PEGRR+F ++V +NL++GA+ R + K I DLE Sbjct: 65 NGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNR----KDKEGIKRDLEW 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 LFPRLKER QL GTLSGGEQQMLA+ RA+M P+++++DEPS+GLAPILV EVF Sbjct: 121 IFSLFPRLKERLKQLGGTLSGGEQQMLAIG-RALMSRPKLLMMDEPSLGLAPILVSEVFE 179 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLG 238 +I ++ ++G T+LLVEQ A AL VA YGYVLE G+I + G A +L ++ V+ AYLG Sbjct: 180 VIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLG 237 >DR2118 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Dra Deinococcus radiodurans Length = 236 Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 127/239 (53%), Positives = 170/239 (71%), Gaps = 5/239 (2%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 +L I NL YG ++ + G+S+EV +G+VVTLIG+NGAGKTTT+RA+S M++P G + Sbjct: 3 LLEIENLGVNYGAIQAVRGLSLEVQEGEVVTLIGANGAGKTTTLRAVSRMVRPVAGIIRF 62 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GG+D+T + + G+A SPEGR+V A S+ DNL LGA+ R RA I DL+R Sbjct: 63 GGRDITRIPPDEAVKIGIAQSPEGRQVLARQSIQDNLELGAYVRSDRA----GIQADLQR 118 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 + FPRL ER+TQLAGTLSGGEQQMLA+ RA+M P+++LLDEPS+GLAP++V E+F Sbjct: 119 MYDRFPRLGERRTQLAGTLSGGEQQMLAIA-RALMSRPKLLLLDEPSLGLAPLIVREIFT 177 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGG 239 II L EQG+T+LLVEQ A A+N + YVLE G+++ G + +L ND V AYLGG Sbjct: 178 IIRELNEQGMTILLVEQNAKLAMNASHRTYVLEAGQLTFSGVSSELVNDERVLHAYLGG 236 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 117/239 (48%), Positives = 170/239 (71%), Gaps = 4/239 (1%) Query: 1 MLTISNLQAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGTVTL 60 ML + +LQ Y ++ L GIS+E+ +G+VV++IG+NGAGKTTT++ ISG+I PK G++ Sbjct: 3 MLEVKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIF 62 Query: 61 GGKDVTGQDSHKIARAGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GK++ + +H I + G+A PEGRR+F+ ++V DNL LG F A K D Sbjct: 63 EGKNLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVKDSAEKK---EEDRAN 119 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAVTPRAVMLNPEVILLDEPSMGLAPILVEEVFR 180 ++FPR+ ER+ QLAGTLSGGEQQMLA+ RA+M P++++LDEPSMGL+P+ V+E+F Sbjct: 120 FYKVFPRMSERKNQLAGTLSGGEQQMLAM-GRALMSRPKLLILDEPSMGLSPLFVKEIFE 178 Query: 181 IILRLKEQGITMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVQAAYLGG 239 +I +LKE+G T+LLVEQ A AL+++D YV+E G+I + G A+ L + V+ AYLGG Sbjct: 179 VIKQLKEKGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAEDLLYNDRVKKAYLGG 237