BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0069.p         (272 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21504 [G] COG0726 Predicted xylanase/chitin deacetylase Sme S...   157   2e-38
CC2428 [G] COG0726 Predicted xylanase/chitin deacetylase Ccr Cau...   146   6e-35
AGc856 [G] COG0726 Predicted xylanase/chitin deacetylase Atu Agr...   119   1e-26

>SMb21504 [G] COG0726 Predicted xylanase/chitin deacetylase Sme Sinorhizobium
           meliloti
          Length = 251

 Score =  157 bits (398), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 2/220 (0%)

Query: 42  LQAEAGVVSFTFDDAPASACEAGAHALEHHGVRGTFYVAGGLTDGMEEGKPCHTREHLQT 101
           L+ +  +VSFTFDD P SA  AGA  LE +GVRGTFY+AGGL   +E  +   T E    
Sbjct: 30  LETKVPLVSFTFDDVPDSALGAGAAILEKYGVRGTFYIAGGLAGQVEPDRSLITPEGCSE 89

Query: 102 LLTNGHELGCHSYSHIRCDNLSADALEKELDRNATFLAELGVDIAALNFAYPFGAYAYNA 161
           LL  GHE+GCH+++H R   ++   L  +LDRNA +L  +GV  AA NFA+P+ A   +A
Sbjct: 90  LLARGHEIGCHTFAHRRLREIA--GLGADLDRNAEYLKGVGVSPAASNFAFPYNAAWPSA 147

Query: 162 KRICSRRFRSSRVTSGGTHEHVADLNALKTHRLYDLPVDTENYETLLERTARSKGWLIVN 221
           +    RR+R+ R      +    D   LK   +             ++  +   GWLI  
Sbjct: 148 RAELRRRYRTCRAGGEDINRGAVDPMMLKGVEIRQPEDGARALTRWIDDVSERPGWLIFF 207

Query: 222 THDVESPPSRFGYTPERLEHAVAAALAAGCKVLPVNSAID 261
           THD+ + P+ +G TP+  +H V  A+  GC +LPV+SA D
Sbjct: 208 THDIAAQPTNYGCTPDSFDHLVRYAVEKGCCILPVDSAAD 247


>CC2428 [G] COG0726 Predicted xylanase/chitin deacetylase Ccr Caulobacter
           vibrioides
          Length = 257

 Score =  146 bits (368), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 128/238 (53%), Gaps = 10/238 (4%)

Query: 23  LALRISRRLSQHAFRNLLPLQAEAGVVSFTFDDAPASACEAGAHALEHHGVRGTFYVAGG 82
           L  ++ RRL + A R    +  E  +VSF+FDDAPA+ACEAGA ALE  G+RGT+Y A G
Sbjct: 17  LKGKLRRRLIRLAHRRPAKVALERPMVSFSFDDAPATACEAGARALEARGLRGTYYFAAG 76

Query: 83  LTDGMEEGKPCHTREHLQTLLTNGHELGCHSYSHIRCDNLSADALEKELDRNATFLAELG 142
           LT          T E  + L   GHE+ CH+YSH+ C   S      ++DRNA  LA  G
Sbjct: 77  LTGRDGPMGRYATGEDARRLHEAGHEIACHTYSHLDCGQSSQTETLADVDRNAESLAAWG 136

Query: 143 VDIAALNFAYPFGAYAYNAKRICSRRFRSSRVTSGGTHEHVADLNALKTHRLYDLPVDTE 202
                ++FAYP+G  A  AK   S RF++ R    G     ADLN         + ++ E
Sbjct: 137 AG-DPVSFAYPYGDVAAPAKTALSGRFKTLRALHHGLITDGADLNQTPA-----VGIEGE 190

Query: 203 NYETL----LERTARSKGWLIVNTHDVESPPSRFGYTPERLEHAVAAALAAGCKVLPV 256
           + ET+    L++    K WLI+ THDV   PS++G T E LE  +  ALA G  V+ V
Sbjct: 191 DGETVAKAWLDKAKARKAWLILYTHDVAGQPSQWGCTTEALERLIDRALADGFDVVTV 248


>AGc856 [G] COG0726 Predicted xylanase/chitin deacetylase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 250

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 124/244 (50%)

Query: 16  MSDSASKLALRISRRLSQHAFRNLLPLQAEAGVVSFTFDDAPASACEAGAHALEHHGVRG 75
           M+        RI+ RL ++     + ++    +VSFTFDD PA+A   GA  LE+ GV G
Sbjct: 1   MTQKIGTFVDRINNRLVRYFPGPAVRIEKSEPIVSFTFDDVPATAWTKGARILENEGVCG 60

Query: 76  TFYVAGGLTDGMEEGKPCHTREHLQTLLTNGHELGCHSYSHIRCDNLSADALEKELDRNA 135
           TFY+AG   D  +  +   + +    L   GHEL CH++SH +  + S  ALE++L+RN 
Sbjct: 61  TFYIAGTFIDRHDGQQEMISAKGCSELAAAGHELACHTFSHRKLSSFSRRALEEDLERND 120

Query: 136 TFLAELGVDIAALNFAYPFGAYAYNAKRICSRRFRSSRVTSGGTHEHVADLNALKTHRLY 195
           + L     +  + NF+ PFG  +   + +  RRFR++R    G +    D + L    L 
Sbjct: 121 SVLGAFDENRHSRNFSVPFGMASPVMQPLLRRRFRTTRGIMPGINRDSVDPHNLAAVELR 180

Query: 196 DLPVDTENYETLLERTARSKGWLIVNTHDVESPPSRFGYTPERLEHAVAAALAAGCKVLP 255
                 +  +  LE   +  GWLI+ THDV   PS +G   +R +  V  A + G K++ 
Sbjct: 181 ADQSYLDAADRWLEDVLQKGGWLIIFTHDVSPTPSFYGCPEDRFQGLVRKAASGGAKIMT 240

Query: 256 VNSA 259
           V++A
Sbjct: 241 VDAA 244