BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0050.p         (171 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralsto...   173   2e-43
NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisse...   133   2e-31
NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisse...   131   7e-31
hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherich...   112   3e-25
ECs3393 [O] COG1076 DnaJ-domain-containing proteins 1 Ecs Escher...   112   3e-25

>RSc1023 [O] COG1076 DnaJ-domain-containing proteins 1 Rso Ralstonia
           solanacearum
          Length = 176

 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/168 (58%), Positives = 120/168 (71%), Gaps = 7/168 (4%)

Query: 3   NHFALFQLPQRFAVDLTALEKAYHGVQNQAHPDKFAHATGAEKRVAMQWATRANEAYQTL 62
            HF+LF LP+ F VD  AL  AY  VQ++AHPD+ AHA+ AE+RVAMQWATRANEAYQTL
Sbjct: 7   THFSLFGLPEHFEVDDGALNAAYRTVQSRAHPDRHAHASDAERRVAMQWATRANEAYQTL 66

Query: 63  RNPLKRATYLCELNGVDLETESNTAMPPAFLMQQMEWREELDDARAGKNIDALEQLDGAL 122
           R+PLKRATYL  L GVD++ E+NTAMPPAFLMQQ+EWRE L DA+A  ++DAL+ L   L
Sbjct: 67  RDPLKRATYLLHLRGVDVQAENNTAMPPAFLMQQLEWRESLADAKAAGDLDALDDLLAML 126

Query: 123 RGAKKDAVARIETLLDADDFAG----AAQLVRQLMFLEKFGEEIGNAF 166
           RG K+   AR +TL    +  G    AA  VRQLMF+EK   +   A 
Sbjct: 127 RGEKR---ARYQTLAGLLNGGGHDAAAADAVRQLMFIEKIERDTAEAI 171


>NMB1383 [O] COG1076 DnaJ-domain-containing proteins 1 Nme Neisseria
           meningitidis MC58
          Length = 166

 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 102/165 (61%)

Query: 1   MQNHFALFQLPQRFAVDLTALEKAYHGVQNQAHPDKFAHATGAEKRVAMQWATRANEAYQ 60
           M  +F LF++   F +D   LE+ Y  +  + HPDKFA A+  E++ A+  ++  N+AY+
Sbjct: 1   MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60

Query: 61  TLRNPLKRATYLCELNGVDLETESNTAMPPAFLMQQMEWREELDDARAGKNIDALEQLDG 120
           TL+NP+ RA YL + +G+D +   +TA  P FLMQQMEWRE L +ARAG ++++L+ LD 
Sbjct: 61  TLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRETLMEARAGNDLESLKNLDN 120

Query: 121 ALRGAKKDAVARIETLLDADDFAGAAQLVRQLMFLEKFGEEIGNA 165
            +R  ++     ++      D+  AAQ VRQ  FL+K   EI +A
Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165


>NMA1598 [O] COG1076 DnaJ-domain-containing proteins 1 NmA Neisseria
           meningitidis Z2491
          Length = 166

 Score =  131 bits (330), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 102/165 (61%)

Query: 1   MQNHFALFQLPQRFAVDLTALEKAYHGVQNQAHPDKFAHATGAEKRVAMQWATRANEAYQ 60
           M  +F LF++   F +D   LE+ Y  +  + HPDKFA A+  E++ A+  ++  N+AY+
Sbjct: 1   MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYR 60

Query: 61  TLRNPLKRATYLCELNGVDLETESNTAMPPAFLMQQMEWREELDDARAGKNIDALEQLDG 120
           TL+NP+ RA YL + +G+D +   +T+    FLMQQMEWRE L +ARAGK++++L+ LD 
Sbjct: 61  TLKNPIDRAAYLLKTSGIDADAPEHTSFASEFLMQQMEWRETLMEARAGKDLESLKNLDN 120

Query: 121 ALRGAKKDAVARIETLLDADDFAGAAQLVRQLMFLEKFGEEIGNA 165
            +R  ++     ++      D+  AAQ VRQ  FL+K   EI +A
Sbjct: 121 EIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRNEISSA 165


>hscB [O] COG1076 DnaJ-domain-containing proteins 1 Eco Escherichia coli
           K12
          Length = 171

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 6/159 (3%)

Query: 3   NHFALFQLPQRFAVDLTALEKAYHGVQNQAHPDKFAHATGAEKRVAMQWATRANEAYQTL 62
           ++F LF LP R+ +D  AL   +  +Q Q HPDKFA  + AE+  A+Q +   N+A+QTL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 63  RNPLKRATYLCELNGVDLETESNTAMPPAFLMQQMEWREELDDARAGKNIDALEQLDGAL 122
           R+PL RA YL  L+G DL +E +T    AFLM+Q+E REELD+    K+   LE     +
Sbjct: 62  RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESF---I 118

Query: 123 RGAKKDAVARIETL---LDADDFAGAAQLVRQLMFLEKF 158
           +  KK    R + +   LD + +  AA  VR+L FL+K 
Sbjct: 119 KRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKL 157


>ECs3393 [O] COG1076 DnaJ-domain-containing proteins 1 Ecs Escherichia coli
           O157:H7
          Length = 171

 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 6/159 (3%)

Query: 3   NHFALFQLPQRFAVDLTALEKAYHGVQNQAHPDKFAHATGAEKRVAMQWATRANEAYQTL 62
           ++F LF LP R+ +D  AL   +  +Q Q HPDKFA  + AE+  A+Q +   N+A+QTL
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 63  RNPLKRATYLCELNGVDLETESNTAMPPAFLMQQMEWREELDDARAGKNIDALEQLDGAL 122
           R+PL RA YL  L+G DL +E +T    AFLM+Q+E REELD+    K+   LE     +
Sbjct: 62  RHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESF---I 118

Query: 123 RGAKKDAVARIETL---LDADDFAGAAQLVRQLMFLEKF 158
           +  KK    R + +   LD + +  AA  VR+L FL+K 
Sbjct: 119 KRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKL 157