BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0013.0049.p (206 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0418 [E] COG1280 Putative threonine efflux protein Rso Ralsto... 174 1e-43 BH0429 [E] COG1280 Putative threonine efflux protein Bha Bacillu... 155 6e-38 MA1855 [E] COG1280 Putative threonine efflux protein Mac Methano... 149 4e-36 BH3495 [E] COG1280 Putative threonine efflux protein Bha Bacillu... 144 2e-34 RSc0073 [E] COG1280 Putative threonine efflux protein Rso Ralsto... 130 3e-30 >RSc0418 [E] COG1280 Putative threonine efflux protein Rso Ralstonia solanacearum Length = 206 Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 103/206 (50%), Positives = 151/206 (73%) Query: 1 MPDVFLFLAAAMMLTLAPGPDNIYVLTRGIAQGRKAGLVAALGFSSGLFFHTLLAVLGFA 60 MP+V LFL +++ +T+ PGPDN+ V+ RG +QGRKAGL AA GF+SG FHT LA LG A Sbjct: 1 MPNVLLFLLSSVAITVMPGPDNLQVIARGASQGRKAGLAAAAGFASGCLFHTTLAALGLA 60 Query: 61 AIIKAYPAAYHALQYAGAAYLVYLGIRTLRSAASMSMDATMTPVSLGLSRIYWQSVIANI 120 A++++ PAA+ A+++ GAAYLV+LG++ LRS + + + L +++ QSV+AN+ Sbjct: 61 AVLQSAPAAFQAIRWLGAAYLVWLGVQALRSKGGVGPSVSAQAAAPDLWQVFRQSVLANM 120 Query: 121 LNPKVTLFFIAFLPQFVNVQAGHVAWQMLLLAVVFILQALAIFSAIAFFSGIVGAYFKRQ 180 LNPKVTLFF+ FLPQFV+ QAGH A QMLLL VF+ Q + +F + + +G + +R Sbjct: 121 LNPKVTLFFVVFLPQFVDAQAGHAALQMLLLGGVFMAQTIVVFGLYGWCAAALGGWMRRT 180 Query: 181 ARAALYLNRLAGCAFVGLGIRIALPE 206 RA+L+L+R++GC F+GLG+R+AL + Sbjct: 181 PRASLWLDRVSGCIFIGLGLRVALTK 206 >BH0429 [E] COG1280 Putative threonine efflux protein Bha Bacillus halodurans Length = 207 Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 126/201 (62%), Gaps = 4/201 (1%) Query: 7 FLAAAMMLTLAPGPDNIYVLTRGIAQGRKAGLVAALGFSSGLFFHTLLAVLGFAAIIKAY 66 FL A++LTL PGPD ++VL + ++Q R+AG+V ALG +GL H AV+G +A+I Sbjct: 9 FLGVAVLLTLMPGPDILFVLAQSMSQNRQAGIVTALGLCTGLLVHITAAVVGISALIYQS 68 Query: 67 PAAYHALQYAGAAYLVYLGIRTLRSAAS-MSMDATMTPVSLGLSRIYWQSVIANILNPKV 125 A+ ++YAGAAYL+YL + + +S+D T L +Y + +I N+LNPKV Sbjct: 69 ALAFTVVKYAGAAYLLYLAWKAFQEKGEGLSIDKQTT---LAYGALYKKGIIMNVLNPKV 125 Query: 126 TLFFIAFLPQFVNVQAGHVAWQMLLLAVVFILQALAIFSAIAFFSGIVGAYFKRQARAAL 185 +LFF+A LPQFVN AG WQMLLL VVF++QA IFS +++F+ VG R + Sbjct: 126 SLFFLALLPQFVNSGAGSAPWQMLLLGVVFLIQAFIIFSLVSWFAEKVGQLLMRSSFIKN 185 Query: 186 YLNRLAGCAFVGLGIRIALPE 206 ++R+ G +G+++A + Sbjct: 186 QMHRIKGGLLALIGLQVAFSK 206 >MA1855 [E] COG1280 Putative threonine efflux protein Mac Methanosarcina acetivorans str.C2A Length = 211 Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 126/201 (62%), Gaps = 4/201 (1%) Query: 7 FLAAAMMLTLAPGPDNIYVLTRGIAQGRKAGLVAALGFSSGLFFHTLLAVLGFAAIIKAY 66 F+AA+ LT PGPD ++VLT+ I+QG+ AG+ A G +G+ HT A LG +A++ Sbjct: 13 FIAASAALTFLPGPDILFVLTQSISQGKMAGIATATGLCTGILVHTSAAALGISALLYKS 72 Query: 67 PAAYHALQYAGAAYLVYLGIRTLRSAASMSMDATMTPVS-LGLSRIYWQSVIANILNPKV 125 A+ ++YAGAAYL+YL + L+ + + A + + L L R + + N+LNPKV Sbjct: 73 ALAFEIVKYAGAAYLLYLAWQALKESGELVSSAPVRETNALALYR---RGIFMNVLNPKV 129 Query: 126 TLFFIAFLPQFVNVQAGHVAWQMLLLAVVFILQALAIFSAIAFFSGIVGAYFKRQARAAL 185 LFF+AFLPQFVN+++G V QM+ L +VF++QA IFS+I+ F+GI+G ++ Sbjct: 130 ALFFLAFLPQFVNLESGSVPIQMIFLGIVFLIQAWLIFSSISIFAGIIGDKIVQRPGIGK 189 Query: 186 YLNRLAGCAFVGLGIRIALPE 206 Y+N F +G+++AL Sbjct: 190 YINWGKAGIFTVIGVKLALSH 210 >BH3495 [E] COG1280 Putative threonine efflux protein Bha Bacillus halodurans Length = 208 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/202 (36%), Positives = 121/202 (59%), Gaps = 4/202 (1%) Query: 6 LFLAAAMMLTLAPGPDNIYVLTRGIAQGRKAGLVAALGFSSGLFFHTLLAVLGFAAIIKA 65 LF+ +A+ML + PGPD ++ +T+G+ GRKAG++ A+G S G HTL AVLG + II+ Sbjct: 9 LFMGSAIMLIIIPGPDLVFTITQGMTNGRKAGVITAMGLSLGNIVHTLAAVLGLSLIIQT 68 Query: 66 YPAAYHALQYAGAAYLVYLGIRTLR-SAASMSMDATMTPVSLGLSRIYWQSVIANILNPK 124 + + AGA YL YL + L+ + +++ T L ++ + +I N+LNPK Sbjct: 69 SVVVFTIFKLAGAMYLFYLAYKALKHRKEEIRVNSEKTN---DLKGLFLRGLIMNVLNPK 125 Query: 125 VTLFFIAFLPQFVNVQAGHVAWQMLLLAVVFILQALAIFSAIAFFSGIVGAYFKRQARAA 184 V +F++ FLPQFVN Q+ +++ Q+ +L ++FI+ IFS +FSG + +R Sbjct: 126 VAIFYLTFLPQFVNYQSANISLQLCILGLIFIIMTAIIFSIFGYFSGTFRDRLLKNSRFN 185 Query: 185 LYLNRLAGCAFVGLGIRIALPE 206 Y+N A F+GLG+++ + Sbjct: 186 EYMNIAATIIFIGLGLKLMTTQ 207 >RSc0073 [E] COG1280 Putative threonine efflux protein Rso Ralstonia solanacearum Length = 215 Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 6 LFLAAAMMLTLAPGPDNIYVLTRGIAQGRKAGLVAALGFSSGLFFHTLLAVLGFAAIIKA 65 +F+ A ++L + PGPD Y++ R ++QGR AGL+++LG S+G H L G A++ A Sbjct: 11 VFMLAVLLLNVTPGPDTAYIVGRSVSQGRAAGLMSSLGVSAGCCVHVLAVAFGLTALLAA 70 Query: 66 YPAAYHALQYAGAAYLVYLGIRTLRSAASMSMDATMTPVSLGLSR----IYWQSVIANIL 121 A+ ++ GAAYL+YLG R L + A S DA + R ++ Q + N+L Sbjct: 71 SAVAFTVIKAIGAAYLIYLGGRMLLAPAG-SDDAPVAQAVATARRPLRALFMQGFLTNVL 129 Query: 122 NPKVTLFFIAFLPQFVNVQAGHVAWQMLLLAVVFILQALAIFSAIAFFSGIVGAYFKRQA 181 NPKV LFF++F PQFV+ A H A L+L VFI+ + A S +A+ + V + Sbjct: 130 NPKVVLFFLSFFPQFVDPGASHKAAAFLVLGAVFIVMSTAWNSLVAWVAASVTRRVAGKP 189 Query: 182 RAALYLNRLAGCAFVGLGIRIA 203 +L+R+ G AF+GLG R+A Sbjct: 190 GIKRWLDRVVGTAFIGLGARLA 211