BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0046.p         (188 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1024 [O] COG0443 Molecular chaperone Rso Ralstonia solanacearum    244   5e-65
NMA1340 [O] COG0443 Molecular chaperone NmA Neisseria meningitid...   214   1e-55
NMB1169 [O] COG0443 Molecular chaperone Nme Neisseria meningitid...   214   1e-55
NMB1131 [O] COG0443 Molecular chaperone Nme Neisseria meningitid...   214   1e-55
PA3810 [O] COG0443 Molecular chaperone Pae Pseudomonas aeruginosa     211   6e-55

>RSc1024 [O] COG0443 Molecular chaperone Rso Ralstonia solanacearum
          Length = 621

 Score =  244 bits (624), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 120/131 (91%), Positives = 128/131 (97%)

Query: 1   MVQLKTVAGVKSPVEISAQILATLRQTAEDALGDDLVGAVITVPAYFDDAQRQATKDAAQ 60
           MVQLKTVAGVKSPVE+SA+ILATLRQ AED LGDDLVGAVITVPAYFDDAQRQATKDAA+
Sbjct: 113 MVQLKTVAGVKSPVEVSAEILATLRQRAEDTLGDDLVGAVITVPAYFDDAQRQATKDAAR 172

Query: 61  LAGLNVLRLLNEPTAAAIAYGLDNGSEGIFAVYDLGGGTFDISILKLTKGVFEVLSTGGD 120
           LAGLNVLRLLNEPTAAAIAYGLDN +EG++AVYDLGGGTFDIS+LKLTKGVFEV+STGGD
Sbjct: 173 LAGLNVLRLLNEPTAAAIAYGLDNAAEGVYAVYDLGGGTFDISVLKLTKGVFEVMSTGGD 232

Query: 121 SALGGDDFDQR 131
           SALGGDDFDQR
Sbjct: 233 SALGGDDFDQR 243


>NMA1340 [O] COG0443 Molecular chaperone NmA Neisseria meningitidis Z2491
          Length = 620

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/131 (77%), Positives = 117/131 (89%)

Query: 1   MVQLKTVAGVKSPVEISAQILATLRQTAEDALGDDLVGAVITVPAYFDDAQRQATKDAAQ 60
           +++L T  GVK+PVE+SA+IL TL+  AE+ LG DLVG VITVPAYFDDAQRQATKDAA+
Sbjct: 114 VIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYFDDAQRQATKDAAR 173

Query: 61  LAGLNVLRLLNEPTAAAIAYGLDNGSEGIFAVYDLGGGTFDISILKLTKGVFEVLSTGGD 120
           LAGLNVLRLLNEPTAAAIAYGLDN SEG F VYDLGGGTFD+S+L+LTKG+FEV +TGG+
Sbjct: 174 LAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGN 233

Query: 121 SALGGDDFDQR 131
           SALGGDDFD R
Sbjct: 234 SALGGDDFDHR 244


>NMB1169 [O] COG0443 Molecular chaperone Nme Neisseria meningitidis MC58
          Length = 620

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/131 (77%), Positives = 117/131 (89%)

Query: 1   MVQLKTVAGVKSPVEISAQILATLRQTAEDALGDDLVGAVITVPAYFDDAQRQATKDAAQ 60
           +++L T  GVK+PVE+SA+IL TL+  AE+ LG DLVG VITVPAYFDDAQRQATKDAA+
Sbjct: 114 VIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYFDDAQRQATKDAAR 173

Query: 61  LAGLNVLRLLNEPTAAAIAYGLDNGSEGIFAVYDLGGGTFDISILKLTKGVFEVLSTGGD 120
           LAGLNVLRLLNEPTAAAIAYGLDN SEG F VYDLGGGTFD+S+L+LTKG+FEV +TGG+
Sbjct: 174 LAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGN 233

Query: 121 SALGGDDFDQR 131
           SALGGDDFD R
Sbjct: 234 SALGGDDFDHR 244


>NMB1131 [O] COG0443 Molecular chaperone Nme Neisseria meningitidis MC58
          Length = 620

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/131 (77%), Positives = 117/131 (89%)

Query: 1   MVQLKTVAGVKSPVEISAQILATLRQTAEDALGDDLVGAVITVPAYFDDAQRQATKDAAQ 60
           +++L T  GVK+PVE+SA+IL TL+  AE+ LG DLVG VITVPAYFDDAQRQATKDAA+
Sbjct: 114 VIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYFDDAQRQATKDAAR 173

Query: 61  LAGLNVLRLLNEPTAAAIAYGLDNGSEGIFAVYDLGGGTFDISILKLTKGVFEVLSTGGD 120
           LAGLNVLRLLNEPTAAAIAYGLDN SEG F VYDLGGGTFD+S+L+LTKG+FEV +TGG+
Sbjct: 174 LAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVLQLTKGLFEVKATGGN 233

Query: 121 SALGGDDFDQR 131
           SALGGDDFD R
Sbjct: 234 SALGGDDFDHR 244


>PA3810 [O] COG0443 Molecular chaperone Pae Pseudomonas aeruginosa
          Length = 619

 Score =  211 bits (538), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 102/127 (80%), Positives = 116/127 (91%)

Query: 4   LKTVAGVKSPVEISAQILATLRQTAEDALGDDLVGAVITVPAYFDDAQRQATKDAAQLAG 63
           ++TV G+KSPVE+SA IL  LRQ AE  LG +LVGAVITVPAYFDDAQRQATKDAA+LAG
Sbjct: 117 IETVQGLKSPVEVSADILRELRQRAETTLGGELVGAVITVPAYFDDAQRQATKDAARLAG 176

Query: 64  LNVLRLLNEPTAAAIAYGLDNGSEGIFAVYDLGGGTFDISILKLTKGVFEVLSTGGDSAL 123
           LNVLRLLNEPTAAA+AYGLD G+EG+ A+YDLGGGTFDISIL+LT+GVFEVL+TGGD+AL
Sbjct: 177 LNVLRLLNEPTAAAVAYGLDKGAEGLVAIYDLGGGTFDISILRLTRGVFEVLATGGDTAL 236

Query: 124 GGDDFDQ 130
           GGDDFD 
Sbjct: 237 GGDDFDH 243