BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0015.p         (216 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0120 [C] COG1048 Aconitase A Rso Ralstonia solanacearum            394   e-110
PA0794 [C] COG1048 Aconitase A Pae Pseudomonas aeruginosa             375   e-104
NMA2052 [C] COG1048 Aconitase A NmA Neisseria meningitidis Z2491      370   e-102
NMB0433 [C] COG1048 Aconitase A Nme Neisseria meningitidis MC58       361   e-100
VC1338 [C] COG1048 Aconitase A Vch Vibrio cholerae                    351   6e-97

>RSp0120 [C] COG1048 Aconitase A Rso Ralstonia solanacearum
          Length = 865

 Score =  394 bits (1013), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/216 (88%), Positives = 201/216 (93%)

Query: 1   MADSAAGEYLAKMGLPEEDFNSYATHRGDHLTALRATFANPQLVNEMAVVDGEVRKGSLA 60
           +ADSAAGEYLAKMGLPEEDFNSYATHRGDHLTA RATFANP L NEMAVVDGEV+KGSLA
Sbjct: 650 LADSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPTLRNEMAVVDGEVKKGSLA 709

Query: 61  RVEPDGKVMRMWEAIETYLNRKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEVIAAEGFE 120
           R+EP+GKV RMWEAIE Y+ RKQPLI++AGADYGQGSSRDWAAKGVRLAGVE I AEGFE
Sbjct: 710 RIEPEGKVTRMWEAIEAYMARKQPLIVIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFE 769

Query: 121 RIHRTNLIGMGVLPLEFKPGTTRKTLGIDGTETFDVIGKRTPRADLTLVIIRKNGERVEV 180
           RIHRTNLIGMGVLPLEFKPGTTR TLGIDGTETFDVIG RTPRADLTLVI RKNGERV+V
Sbjct: 770 RIHRTNLIGMGVLPLEFKPGTTRITLGIDGTETFDVIGARTPRADLTLVIHRKNGERVDV 829

Query: 181 PMTCRLDTGEEVSIYEAGGVLQRFAQDFLASTVKAA 216
           P+TCRLDT EEVSIYEAGGVLQRFAQDFL S  +AA
Sbjct: 830 PVTCRLDTAEEVSIYEAGGVLQRFAQDFLESAKEAA 865


>PA0794 [C] COG1048 Aconitase A Pae Pseudomonas aeruginosa
          Length = 868

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/210 (86%), Positives = 195/210 (92%), Gaps = 1/210 (0%)

Query: 1   MADSAAGEYLAKMGLPEEDFNSYATHRGDHLTALRATFANPQLVNEMA-VVDGEVRKGSL 59
           +ADSAAGEYLAKMGLPEEDFNSYATHRGDHLTA RATFANP+L NEM    DG V++GSL
Sbjct: 654 LADSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVRNADGSVKQGSL 713

Query: 60  ARVEPDGKVMRMWEAIETYLNRKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEVIAAEGF 119
           ARVEP+GKVMRMWEAIETY+ RKQPLIIVAGADYGQGSSRDWAAKGVRLAGVE I AEGF
Sbjct: 714 ARVEPEGKVMRMWEAIETYMERKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEAIVAEGF 773

Query: 120 ERIHRTNLIGMGVLPLEFKPGTTRKTLGIDGTETFDVIGKRTPRADLTLVIIRKNGERVE 179
           ERIHRTNLIGMGVLPLEFKPGTTR TLGIDG+ETFDV+G R PRADLTLVI R++GER+E
Sbjct: 774 ERIHRTNLIGMGVLPLEFKPGTTRLTLGIDGSETFDVLGARRPRADLTLVIHRRDGERLE 833

Query: 180 VPMTCRLDTGEEVSIYEAGGVLQRFAQDFL 209
           VP+TCRLD+ EEVSIYEAGGVLQRFAQDFL
Sbjct: 834 VPVTCRLDSDEEVSIYEAGGVLQRFAQDFL 863


>NMA2052 [C] COG1048 Aconitase A NmA Neisseria meningitidis Z2491
          Length = 868

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/210 (84%), Positives = 191/210 (90%), Gaps = 1/210 (0%)

Query: 1   MADSAAGEYLAKMGLPEEDFNSYATHRGDHLTALRATFANPQLVNEMA-VVDGEVRKGSL 59
           +A SAAGEYLAKMGLPEEDFNSYATHRGDHLTA RATFANP+L NEM    DG VR+GSL
Sbjct: 654 LASSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVRNEDGSVRQGSL 713

Query: 60  ARVEPDGKVMRMWEAIETYLNRKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEVIAAEGF 119
           ARVEP+G+ MRMWEAIETY+NRKQPLII+AGADYGQGSSRDWAAKGVRLAGVE I AEGF
Sbjct: 714 ARVEPEGQTMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGF 773

Query: 120 ERIHRTNLIGMGVLPLEFKPGTTRKTLGIDGTETFDVIGKRTPRADLTLVIIRKNGERVE 179
           ERIHRTNLIGMGVLPL+FKPGT R TL +DGTET+DV+G+RTPR DLTLVI RKNGE VE
Sbjct: 774 ERIHRTNLIGMGVLPLQFKPGTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVE 833

Query: 180 VPMTCRLDTGEEVSIYEAGGVLQRFAQDFL 209
           VP+TCRLDT EEV +YEAGGVLQRFAQDFL
Sbjct: 834 VPITCRLDTAEEVLVYEAGGVLQRFAQDFL 863


>NMB0433 [C] COG1048 Aconitase A Nme Neisseria meningitidis MC58
          Length = 868

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/210 (82%), Positives = 188/210 (89%), Gaps = 1/210 (0%)

Query: 1   MADSAAGEYLAKMGLPEEDFNSYATHRGDHLTALRATFANPQLVNEMAVV-DGEVRKGSL 59
           +A SAAGEYLAKMGLPEEDFNSYATHRGDHLTA RATFANP+L NEM    DG VR+GS 
Sbjct: 654 LAVSAAGEYLAKMGLPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKNEDGSVRQGSF 713

Query: 60  ARVEPDGKVMRMWEAIETYLNRKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEVIAAEGF 119
           ARVEP+G+ MRMWEAIETY+NRKQPLII+AGADYGQGSSRDWAAKGVRLAGVE I AEGF
Sbjct: 714 ARVEPEGETMRMWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGF 773

Query: 120 ERIHRTNLIGMGVLPLEFKPGTTRKTLGIDGTETFDVIGKRTPRADLTLVIIRKNGERVE 179
           ERIHRTNLIGMGVLPL+FKP T R TL +DGTET+DV+G+RTPR DLTLVI RKNGE VE
Sbjct: 774 ERIHRTNLIGMGVLPLQFKPDTNRHTLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVE 833

Query: 180 VPMTCRLDTGEEVSIYEAGGVLQRFAQDFL 209
           VP+TC LDT EEV +YEAGGVLQRFAQDFL
Sbjct: 834 VPVTCCLDTAEEVLVYEAGGVLQRFAQDFL 863


>VC1338 [C] COG1048 Aconitase A Vch Vibrio cholerae
          Length = 868

 Score =  351 bits (901), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 160/210 (76%), Positives = 187/210 (89%)

Query: 1   MADSAAGEYLAKMGLPEEDFNSYATHRGDHLTALRATFANPQLVNEMAVVDGEVRKGSLA 60
           +A SAAGEYL KMG+PEEDFNSYATHRGDHLTA RATFANP+L NEM   +G++++GSLA
Sbjct: 658 LASSAAGEYLTKMGVPEEDFNSYATHRGDHLTAQRATFANPKLFNEMVKENGQIKQGSLA 717

Query: 61  RVEPDGKVMRMWEAIETYLNRKQPLIIVAGADYGQGSSRDWAAKGVRLAGVEVIAAEGFE 120
           R+EP+GKV RMWEAIETY+NRKQPLI++AGADYGQGSSRDWAAKGVRLAGVE I AEGFE
Sbjct: 718 RIEPEGKVTRMWEAIETYMNRKQPLIVIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFE 777

Query: 121 RIHRTNLIGMGVLPLEFKPGTTRKTLGIDGTETFDVIGKRTPRADLTLVIIRKNGERVEV 180
           RIHRTNL+GMGVLPLEFKPG  R +L +DGTE FDV+G+  P ADL LV+ R+NGE+++V
Sbjct: 778 RIHRTNLVGMGVLPLEFKPGVNRHSLALDGTELFDVVGEIRPGADLALVVTRQNGEKLDV 837

Query: 181 PMTCRLDTGEEVSIYEAGGVLQRFAQDFLA 210
            +TCRLDT +EV +Y+AGGVLQRFAQDFLA
Sbjct: 838 AVTCRLDTADEVHVYQAGGVLQRFAQDFLA 867