BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0013.0011.p         (50 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM0371 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid...    87   1e-17
ZprpE [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid l...    85   5e-17
ECs0388 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid...    85   5e-17
prpE [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid li...    84   6e-17
RSc1518 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid...    82   4e-16

>STM0371 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
           Sty Salmonella typhimurium LT2
          Length = 628

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/49 (79%), Positives = 45/49 (91%)

Query: 1   VHFVSLLPKTRSGKLLRRSIQAICEGRDPGDLTTIEDPTSLQQIKAALQ 49
           V FVS LPKTRSGK+LRR+IQAICEGRDPGDLTTI+DP SLQQI+ A++
Sbjct: 579 VWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLQQIRQAIE 627


>ZprpE [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
           EcZ Escherichia coli O157:H7 EDL933
          Length = 628

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   VHFVSLLPKTRSGKLLRRSIQAICEGRDPGDLTTIEDPTSLQQIKAALQ 49
           V FVS LPKTRSGK+LRR+IQAICEGRDPGDLTTI+DP SL QI+ A++
Sbjct: 579 VWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLNQIRQAME 627


>ECs0388 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
           Ecs Escherichia coli O157:H7
          Length = 628

 Score = 84.7 bits (208), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   VHFVSLLPKTRSGKLLRRSIQAICEGRDPGDLTTIEDPTSLQQIKAALQ 49
           V FVS LPKTRSGK+LRR+IQAICEGRDPGDLTTI+DP SL QI+ A++
Sbjct: 579 VWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLNQIRQAME 627


>prpE [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
           Eco Escherichia coli K12
          Length = 628

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 44/49 (89%)

Query: 1   VHFVSLLPKTRSGKLLRRSIQAICEGRDPGDLTTIEDPTSLQQIKAALQ 49
           V FVS LPKTRSGK+LRR+IQAICEGRDPGDLTTI+DP SL QI+ A++
Sbjct: 579 VWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQAME 627


>RSc1518 [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
           Rso Ralstonia solanacearum
          Length = 632

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 45/50 (90%)

Query: 1   VHFVSLLPKTRSGKLLRRSIQAICEGRDPGDLTTIEDPTSLQQIKAALQA 50
           V FV+ LPKTRSGKLLRR++QA+ EGRDPGDLTTIEDPT+L Q++ A+QA
Sbjct: 583 VFFVNALPKTRSGKLLRRAMQAVAEGRDPGDLTTIEDPTALAQVREAMQA 632