BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0012.0159.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SP2229 [J] COG0180 Tryptophanyl-tRNA synthetase Spn Streptococcu...    73   2e-13
SPy2207 [J] COG0180 Tryptophanyl-tRNA synthetase Spy Streptococc...    70   1e-12
STM4508 [J] COG0180 Tryptophanyl-tRNA synthetase Sty Salmonella ...    64   1e-10
L0358 [J] COG0180 Tryptophanyl-tRNA synthetase Lla Lactococcus l...    60   9e-10

>SP2229 [J] COG0180 Tryptophanyl-tRNA synthetase Spn Streptococcus
           pneumoniae TIGR4
          Length = 341

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/69 (52%), Positives = 50/69 (72%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           RGGLGD   KR L   L+  L PIR RR ++ ++ GEV  ++++G+ERAR  A QT+SEV
Sbjct: 272 RGGLGDVKTKRYLLEILERELGPIRERRIEFAKDMGEVYNMIQKGSERAREVAGQTLSEV 331

Query: 66  RGALGLNYF 74
           +GA+GL+YF
Sbjct: 332 KGAMGLHYF 340


>SPy2207 [J] COG0180 Tryptophanyl-tRNA synthetase Spy Streptococcus pyogenes
           M1 GAS
          Length = 340

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/68 (48%), Positives = 48/68 (70%)

Query: 7   GGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEVR 66
           GGLGD   KR L   L+  L PIR RR ++ ++ GEV  +L+ G+++AR  AA+T+SEV+
Sbjct: 273 GGLGDVKTKRYLLDILERELAPIRERRLEYAKDMGEVFRMLQEGSQKARTVAAKTLSEVK 332

Query: 67  GALGLNYF 74
            A+G+NYF
Sbjct: 333 SAMGINYF 340


>STM4508 [J] COG0180 Tryptophanyl-tRNA synthetase Sty Salmonella typhimurium
           LT2
          Length = 337

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 44/66 (66%)

Query: 6   RGGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEV 65
           +GGLGD V K  LE  LQEL+ PIR RR  +  ++G ++ +L++G+ERA     +T+ EV
Sbjct: 266 QGGLGDRVCKNELETCLQELIAPIRERRATFIADKGMLMELLKKGSERAHEVTQKTLQEV 325

Query: 66  RGALGL 71
           +  LGL
Sbjct: 326 KRGLGL 331


>L0358 [J] COG0180 Tryptophanyl-tRNA synthetase Lla Lactococcus lactis
          Length = 341

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 43/68 (63%)

Query: 7   GGLGDSVLKRRLEGHLQELLEPIRTRREQWQQERGEVLAILRRGTERARAAAAQTVSEVR 66
           GGLGD   KR L   L   L PIR RR ++ Q    V  +L+ G+ +A+A A+QT+ EV+
Sbjct: 273 GGLGDVKTKRFLLDVLDRELSPIRERRIEFAQNMDYVYDMLKAGSLKAQAVASQTLDEVK 332

Query: 67  GALGLNYF 74
            A+G+NYF
Sbjct: 333 SAMGINYF 340