BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0133.p (1348 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2383 [S] COG2911 Uncharacterized protein conserved in bacteri... 1020 0.0 NMB2135 [S] COG2911 Uncharacterized protein conserved in bacteri... 194 1e-48 NMA0295 [S] COG2911 Uncharacterized protein conserved in bacteri... 194 2e-48 PA2542 [S] COG2911 Uncharacterized protein conserved in bacteria... 130 2e-29 XF1232 [S] COG2911 Uncharacterized protein conserved in bacteria... 109 5e-23 >RSc2383 [S] COG2911 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 1299 Score = 1020 bits (2638), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/1337 (43%), Positives = 823/1337 (61%), Gaps = 59/1337 (4%) Query: 7 TDHPEDQQAPEPRREGAGRRVL-YVLLAVATLLLALAATLAWVVG---TDSGTRSAWRLA 62 T P AP P G GRR+L + L VA +LLA+AA W+V + +GT W LA Sbjct: 5 TPEPTRPDAPIPPGRGWGRRLLRWAGLLVAFVLLAVAALCGWLVWALQSPTGTAQLWSLA 64 Query: 63 VWSMQGKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLSLRQRRLTVSYLRV 122 +SG GG+L DG+ LR+L R ++ ID ++ W ++ +YL Sbjct: 65 TRFGHAHVSGRLAGGTLRDGLSLRDLHVRAGGTEVRIDHVEGRWAITRGPWHARFAYLSA 124 Query: 123 GTVDINKQPLPPTP-TIMPSSLSLPLALNLNDVSLQKLILQQGTSVTELSGLQLHGTSDG 181 G VD+ P PTP + +P+SL+LPLAL+++ +++ +L ++QGTS TEL L +DG Sbjct: 125 GNVDVTLHPTAPTPPSGLPASLTLPLALDVDRLAVDRLAIRQGTSTTELKALAGSLHTDG 184 Query: 182 VQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQEKSSEKFQLAA 241 H ++LD + T G+ A L + G +P+ L G LA ++ Q ++ S A Sbjct: 185 SHHNVLLDSVDTPAGRLAATLRMAGTRPYPLTGAATLAAQFEAGGQRREASVS------A 238 Query: 242 QLSGSLQELGIALTATGDKLNGKADIVATPFSTVPLKRAKVDLQHVNPQAFSNGAPKADL 301 QLSGSL+ L I TG L +A I ATPF +P RA V + VNP+AF+ GAP+A L Sbjct: 239 QLSGSLEALRIDAIGTGAGLTAQARIDATPFGALPFTRAVVSAEQVNPRAFAPGAPEAAL 298 Query: 302 Q-----RPVAGATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVDSQQLDDLR 356 RP A AT L VAGPV I NA G LD QRLPL S++A+V L +QQL L Sbjct: 299 SVHADLRPDAQAT--TLTVAGPVRIDNAQAGPLDWQRLPLQSLRAQVRLTEAAQQLTGLD 356 Query: 357 IALLKNATLTGKGQFHPADKAGRFDFDVAGLDLQAIHSELKPTRLAGPLNVVLKPGGQDI 416 + L A +TG + G +V LDLQA+H L+ TRLAGP+ V + G Q + Sbjct: 357 VRLPGGAQVTGSADVR--NGRGTLRAEVRQLDLQALHGALEKTRLAGPVTVDFEGGTQHV 414 Query: 417 MLKLQDAQYSIQANAAVTPEQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFKGKLANFD 476 L L QA A + Q+ + L+ ++RL L+GTL A +AFKG LA FD Sbjct: 415 RLDLAGGDMRAQATAVLDAAQIAVDSAQLSLGRSRLSLSGTLKHDEAQSFAFKGNLAEFD 474 Query: 477 PSLWMKTGKAPANAKAGTAAHAISARINMDFDTAGSLSPELQARLNFIIHDSSYDQLPMS 536 PS K + RIN FDT G+L+ + A + F + DS Y LPM+ Sbjct: 475 PSRLAKVARG---------------RINATFDTHGTLAEPIDAAIRFAVRDSEYAGLPMT 519 Query: 537 GSGKLQLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGFGVAGMLK 596 G G L L G RLLPS + VAGN+ L+G+FGA D++ + IDAPQLARL GV G L Sbjct: 520 GDGNLHLRGPRLLPSDARLDVAGNRASLRGSFGAAGDRMHVDIDAPQLARLRLGVGGALS 579 Query: 597 LDGQLTGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNKLQLSIDG 656 L G ++G+++RP + AT+ +QLA+G + ++ G+A L+ L+ LQ + Sbjct: 580 LSGDVSGTLKRPQVEATFRAQQLAYGGNRIDAASGRAQLRDGLD-------GPLQFELTA 632 Query: 657 DGYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDKNGYGWNG 716 S P+ L++++ +L GT H+ ADG VR+Q L G +T K+G W G Sbjct: 633 QRVSAPNVLLREVRATLDGTRRAHRFRADADGSVRSQPFTFALAGDGALTPGKDGDAWAG 692 Query: 717 VIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGRIRSEGSA 776 + L +G P + L AP+ +++A L G L +D+ I + + QG +RS G Sbjct: 693 TLSTLSARGAPDLQLTAPVRVSVAPGRLAVGRADLTLDQTPIRIERVESDQGHLRSAGRV 752 Query: 777 KTLDVGRILELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKSGDVSVNT 836 L + R+LELVR +G APP +TDLV+D W+ L T +G ++ R+SGD+S+N Sbjct: 753 DGLAIARVLELVRIWTGQ---APPVRTDLVIDGQWDLDLGGTATGTARIARRSGDLSINA 809 Query: 837 GASQVALGLSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQ--DGVLTLL-PD 893 G LGL+ + G +G V ++R+G I GL R+ G L L+ P Sbjct: 810 GRGFTPLGLTEAVVEARGEGMRLGLHGDVQSTRVGRIHLDAGIGLAREAVPGALALMSPA 869 Query: 894 SPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLF 953 SPL+ +++P +K +G LLGP +LDG+LA ++ AGT+ P++SG ++G + V L+ Sbjct: 870 SPLSGTLTVDLPRLKAVGDLLGPDVALDGRLAANLTFAGTVGAPKVSGLLDGQGIDVALY 929 Query: 954 DQGIQLKDGTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAIVADRLQL 1013 DQGI+L DGTV + +D NV+DL+++ FHGG+GTLRA G+V+LG+A+P+L +VADRLQL Sbjct: 930 DQGIRLTDGTVHVGLDQNVVDLKEVVFHGGDGTLRAQGRVQLGEANPNLAGTLVADRLQL 989 Query: 1014 FASPDRQLMLSGQAKLANVNEQLRIDGKFMVDKALFDLPKSSAPKLGDDVVIVRKDKDGK 1073 FA PDR L+LSGQA++AN ++++ I GKF +D+ LF+LPK AP LGDDVVIVR+ + Sbjct: 990 FADPDRTLVLSGQARIANESDRVAITGKFRIDRGLFNLPKDGAPSLGDDVVIVRRADAAR 1049 Query: 1074 SRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNVRSE 1133 +RA+ G TS+E EKPAGRF+PV+++ VD G++FRF G+GADL L G+M+V SE Sbjct: 1050 NRAERG---TSRE------EKPAGRFSPVVDVDVDFGDHFRFKGAGADLALGGQMHVHSE 1100 Query: 1134 PLLPLRATGTVRVSEG-TYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQDVEAGVE 1192 PL+PLR TG++ V +G TYEAFG KL IE+GI+NF GPI+NP+LNILAMRRNQ+VEAGV+ Sbjct: 1101 PLVPLRGTGSIYVRQGSTYEAFGRKLAIEQGILNFTGPINNPSLNILAMRRNQEVEAGVQ 1160 Query: 1193 VTGNANQPRVRLVSEPNVPDDEKLSWMMFGHGSDSSGLGQRSA-SSQALAFVGNYGGKKI 1251 VTG QPRV+LVSEP+V D++KLSW+MFG+ + ++GLGQ+ A S AL +GN GK + Sbjct: 1161 VTGTVRQPRVKLVSEPSVADEDKLSWLMFGYSASNAGLGQQQAMSGAALGLLGNVAGKNV 1220 Query: 1252 AKDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQLSRRWS 1311 A+ GLD+FSIG S SGL+D QVV++GK+ISE++++GYEQSL+ A SI K TWQLSRRWS Sbjct: 1221 ARRFGLDEFSIGPSTSGLTDPQVVSVGKAISERIAVGYEQSLSTADSIVKLTWQLSRRWS 1280 Query: 1312 LVARTGTIFSIWIFYSQ 1328 +VAR GTI I +++ Sbjct: 1281 VVARGGTINGASILFNK 1297 >NMB2135 [S] COG2911 Uncharacterized protein conserved in bacteria Nme Neisseria meningitidis MC58 Length = 1405 Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 137/432 (31%), Positives = 225/432 (52%), Gaps = 32/432 (7%) Query: 894 SPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLF 953 +PL L V + + L ++ G L + G++A P L G+INGD L Sbjct: 968 APLGGRLNLTVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQ 1027 Query: 954 DQGIQLKDGTVR--IVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAIVADRL 1011 QGI L +G++R I VID ++F EGT +G V + ++ PD++ V D+ Sbjct: 1028 TQGIILDNGSLRSHIAGRKWVID--SLKFRH-EGTAELSGTVGMENSGPDVDIGAVFDKY 1084 Query: 1012 QLFASPDRQLMLSGQAKLANVNEQ-LRIDGKFMVDKALFDLPKSSAPKLGDDVVIVRKDK 1070 ++ + P+R+L +SG +L ++ + + G D+ LF KSS P +GDDVV++ Sbjct: 1085 RILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVL---- 1140 Query: 1071 DGKSRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNV 1130 + K AA P MN+ +DL + RF G GAD+ + G++ + Sbjct: 1141 -------------GEVKKEAAAPLPVN-----MNLTLDLNDGIRFAGYGADVTIGGKLTL 1182 Query: 1131 RSEPLLPLRATGTVRVSEGTYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQDVEAG 1190 ++ +R GTVRV +G Y+A+G L+I +G ++F GP+++PNLNI A RR V AG Sbjct: 1183 TAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAG 1242 Query: 1191 VEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGH-GSDSSGLGQRSASSQALAFVGNYGGK 1249 VE+ G+ N PR+ L + + + +KLSW++ GS SSG +++ G + Sbjct: 1243 VEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDR 1302 Query: 1250 -KIAKDIGLDQFSIGASESGLSD--EQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQL 1306 + D+G +++G + EQV+ +GK ++ KL +GYE S++ A K ++L Sbjct: 1303 IGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYSISSAEQSVKLIYRL 1362 Query: 1307 SRRWSLVARTGT 1318 +R VAR G+ Sbjct: 1363 TRAIQAVARIGS 1374 Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 237/988 (23%), Positives = 408/988 (41%), Gaps = 101/988 (10%) Query: 2 TAPTATDHPED--QQAPEPRRE---GAGRRVLYVLLAVATLLLALAAT-LAWVVGTDSGT 55 TAPT TD E+ ++ P R RR L L A +L LA L W+ GT++G Sbjct: 20 TAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLSVLILAVCFLGWLAGTEAGL 79 Query: 56 RSA-WRLAVWSMQGKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLS-LRQR 113 R +++ W +S + G+L DG N L I R AW S L +R Sbjct: 80 RFGLYQIPSW-FGVNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELMRR 138 Query: 114 RLTVSYLRVGTVDINKQPLPPT----PTIMPSSLSLPLALNLNDVSLQKLILQQG--TSV 167 L ++ + G + I +P PP P +P S+ LP A+ L+ K+ + + Sbjct: 139 SLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDKQT 198 Query: 168 TELSGLQLHGTSDGVQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQ 227 L L D H L L T + ++ + K+PFAL+ + G + Sbjct: 199 VYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAASVGLKKPFALDTAIYTKGGLE---- 254 Query: 228 DQQEKSSEKFQLAAQLSGSLQELGIALTATGDKLNGKADIVATPFSTV---PLKRAKVDL 284 + A+LSGSL+++ L G + V PF+ L+ V Sbjct: 255 ------GKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKG 308 Query: 285 QHVNPQAFSNGAPKADLQRPVAG--ATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKAR 342 ++NP AF P A L + + ++ + + G +D+ N G D+ +P+ + Sbjct: 309 FNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLG- 367 Query: 343 VDLGVDSQQLDDLRIALLKNATLTGKGQFHPADKAGRFDFDVAGLDLQ-AIHS----ELK 397 G +Q + I +A L G+G +G+ D + LDL I+S ++ Sbjct: 368 ---GFVIRQDGTVHIGN-TSAALLGRGGIR---LSGKIDTEKDILDLNIGINSVGAEDVL 420 Query: 398 PTRLAGPLNVVLKPGGQDIMLKLQ----------DAQYSIQANAAVTPEQVTLKQVLLTA 447 T G L+ + GG K+ D +I ++ A ++ L V + A Sbjct: 421 QTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAA 480 Query: 448 QKARLELAGTLGTVGAMEYAFKGKLANFDPSLWMKTGKAPANAKAGTAAHAISARINMDF 507 + G+L G +E FK +L D P+ A I+ IN+ Sbjct: 481 GQ------GSLTAQGYLEL-FKDRLLKLD---IRSRAFDPSRIDPQLPAGNINGSINL-- 528 Query: 508 DTAGSLSPE-LQARLNFIIHDSSYDQLPMSGSGKLQLAGKRLLPSSLDMLVAGNQLQLKG 566 AG L+ E ++ F+ +++ +P++GS + + L +++D+ + N ++ G Sbjct: 529 --AGELAKEKFTGKMRFL--PGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTDG 584 Query: 567 AFGAPSDKLDIHIDAPQLARLGFGVAGMLKLDGQLTGSMQRPNLRATYSGRQLAFGPHHL 626 FG D+L+++I AP L+R GFG+AG L + G L+G + +R + A H+ Sbjct: 585 GFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLD-GGIRTFETDLSGAARNLHI 643 Query: 627 NRVDGQADLQTDLNASAASASNKLQLSIDGD--GYSGPDAALKQLKLSLSGTFGEHKLAV 684 + L L S S ++ I G SG A + L L GT +H++ Sbjct: 644 GKAADIRSLDFTLKGS-PDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQHRIRT 702 Query: 685 QADGRVRNQTLALQLNAHGKVTQDKNGYGWNGVIDKLDNQGLPRIALAAPLSLALAADTL 744 A + + L+A G + ++ W G I LD G + L ++L A+ + Sbjct: 703 HAAMTLDGKPFKFDLDASGGINRELT--RWKGSIGILDIGGAFNLKLQNRMTLEAGAERV 760 Query: 745 VAGATRLNVDRMAIDLRSLSY-QQGRIRSEGSAKTLDVGRILELVREMSGASAAAPPAKT 803 A A +++L+ S+ ++ I ++G A L + + + PP + Sbjct: 761 AASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFK---------PPFEH 811 Query: 804 DLVLDADWNFSLAETVSGFFQVLRKSGDVSVNTGASQVALGLSALQLRVDLAGHEAK--F 861 +LVL+ DW+ + G+ + R+SGD + G ALGL+A L+ Sbjct: 812 NLVLNGDWDVAYGRNARGYLNISRQSGDAVLPGGQ---ALGLNAFSLKTRFQNDRIGILL 868 Query: 862 NGGVTASRIGTIEAQ-GQAGLLRQDGVLTLLPDSPLTAHARLNVPEVKTIGALL-GPQYS 919 +GG +R G I A G A + + ++PL ++P++ + L + Sbjct: 869 DGG---ARFGRINADLGIANAFGGN-----MANAPLGGRITASLPDLGALKPFLPAAAQN 920 Query: 920 LDGKLAMDINAAGTLAKPRLSGAINGDS 947 + G L G + P ++ A+NG S Sbjct: 921 ITGSLNAAAQIGGRVGSPSVNAAVNGSS 948 >NMA0295 [S] COG2911 Uncharacterized protein conserved in bacteria NmA Neisseria meningitidis Z2491 Length = 1371 Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 137/432 (31%), Positives = 225/432 (52%), Gaps = 32/432 (7%) Query: 894 SPLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLF 953 +PL L V + + L ++ G L + G++A P L G+INGD L Sbjct: 934 APLGGRLNLTVADAEVFRNFLPVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQ 993 Query: 954 DQGIQLKDGTVR--IVMDDNVIDLRQIEFHGGEGTLRATGKVKLGDADPDLNAAIVADRL 1011 QGI L +G++R I VID ++F EGT +G V + ++ PD++ V D+ Sbjct: 994 TQGIILDNGSLRSHIAGRKWVID--SLKFRH-EGTAELSGTVGMENSGPDVDIGAVFDKY 1050 Query: 1012 QLFASPDRQLMLSGQAKLANVNEQ-LRIDGKFMVDKALFDLPKSSAPKLGDDVVIVRKDK 1070 ++ + P+R+L +SG +L ++ + + G D+ LF KSS P +GDDVV++ Sbjct: 1051 RILSRPNRRLTVSGNTRLRYSPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVL---- 1106 Query: 1071 DGKSRAKAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNV 1130 + K AA P MN+ +DL + RF G GAD+ + G++ + Sbjct: 1107 -------------GEVKKEAAAPLPVN-----MNLTLDLNDGIRFAGYGADVTIGGKLTL 1148 Query: 1131 RSEPLLPLRATGTVRVSEGTYEAFGTKLNIERGIINFQGPISNPNLNILAMRRNQDVEAG 1190 ++ +R GTVRV +G Y+A+G L+I +G ++F GP+++PNLNI A RR V AG Sbjct: 1149 TAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFVGPLNDPNLNIRAERRLSPVGAG 1208 Query: 1191 VEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGH-GSDSSGLGQRSASSQALAFVGNYGGK 1249 VE+ G+ N PR+ L + + + +KLSW++ GS SSG +++ G + Sbjct: 1209 VEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGSGSSGDNAALSAAAGALLAGQINDR 1268 Query: 1250 -KIAKDIGLDQFSIGASESGLSD--EQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQL 1306 + D+G +++G + EQV+ +GK ++ KL +GYE S++ A K ++L Sbjct: 1269 IGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQLTGKLYIGYEYSISSAEQSVKLIYRL 1328 Query: 1307 SRRWSLVARTGT 1318 +R VAR G+ Sbjct: 1329 TRAIQAVARIGS 1340 Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 228/975 (23%), Positives = 402/975 (41%), Gaps = 99/975 (10%) Query: 10 PEDQQAPEPRREGAGRRVLYVLLAVATLLLALAAT-LAWVVGTDSGTRSA-WRLAVWSMQ 67 P + + P ++ RR L L A +L LA L W+ GT++G R +++ W Sbjct: 2 PSEHRPTPPAKK---RRPLLKLSAALLSVLILAVCFLGWLAGTEAGLRFGLYQIPSW-FG 57 Query: 68 GKLSGVHGGGSLADGVHLRNLRYRDAAMQLDIDRIDAAWDLS-LRQRRLTVSYLRVGTVD 126 +S + G+L DG N L I R AW S L +R L ++ + G + Sbjct: 58 VNISSQNLKGTLLDGFDGDNWSIETEGADLKISRFRFAWKPSELMRRSLHITEISAGDIA 117 Query: 127 INKQPLPPT----PTIMPSSLSLPLALNLNDVSLQKLILQQG--TSVTELSGLQLHGTSD 180 I +P PP P +P S+ LP A+ L+ K+ + + L L D Sbjct: 118 IVTKPTPPKEERPPLSLPDSIDLPAAVYLDRFETGKISMGKAFDKQTVYLERLDASYRYD 177 Query: 181 GVQHTLVLDKLTTAFGQATALLHLNGKQPFALNGGVELAGLYQQDQQDQQEKSSEKFQLA 240 H L L T + ++ + K+PFAL+ + G + + Sbjct: 178 RKGHRLDLKAADTPWSSSSGSASVGLKKPFALDTAIYTKGGLE----------GKTIHST 227 Query: 241 AQLSGSLQELGIALTATGDKLNGKADIVATPFSTV---PLKRAKVDLQHVNPQAFSNGAP 297 A+LSGSL+++ L G + V PF+ L+ V ++NP AF P Sbjct: 228 ARLSGSLKDVRAELAIDGGNIRLSGKSVIHPFAESLDKTLEEVLVKGFNINPSAFVPSLP 287 Query: 298 KADLQRPVAG--ATAENLRVAGPVDIVNAIPGSLDQQRLPLTSIKARVDLGVD-SQQLDD 354 A L + + ++ + + G +D+ N G D+ +P+ + + D + + + Sbjct: 288 DAGLNFDLTAIPSFSDGIALEGSLDLENTKAGFADRNGIPVRQVLGSFVIRQDGTVHIGN 347 Query: 355 LRIALLKNATLTGKGQFHPADKAGRFDFDVAGLDLQ-AIHS----ELKPTRLAGPLNVVL 409 +ALL G+G +G+ D + LDL I+S ++ T G L+ + Sbjct: 348 TSVALL------GRGGIR---LSGKIDTEKDILDLNIGINSVGAEDVLQTAFKGRLDGSI 398 Query: 410 KPGGQDIMLKLQ----------DAQYSIQANAAVTPEQVTLKQVLLTAQKARLELAGTLG 459 GG K+ D +I ++ A ++ L V + A + G+L Sbjct: 399 GIGGTTASPKISWQLGIGTARTDGSLAIASDPANGQRKLVLDTVNIAAGQ------GSLT 452 Query: 460 TVGAMEYAFKGKLANFDPSLWMKTGKAPANAKAGTAAHAISARINMDFDTAGSLSPE-LQ 518 G +E FK +L D P+ A I+ IN+ AG L+ E Sbjct: 453 AQGYLEL-FKDRLLKLD---IRSRAFDPSRIDPQLPAGNINGSINL----AGELAKEKFT 504 Query: 519 ARLNFIIHDSSYDQLPMSGSGKLQLAGKRLLPSSLDMLVAGNQLQLKGAFGAPSDKLDIH 578 ++ F+ +++ +P++GS + + L +++D+ + N ++ G FG D+L+++ Sbjct: 505 GKMRFL--PGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKTDGGFGKKGDRLNLN 562 Query: 579 IDAPQLARLGFGVAGMLKLDGQLTGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTD 638 I AP L+R GFG+AG L + G L+G + +R + A H+ + L Sbjct: 563 ITAPDLSRFGFGLAGSLNVRGHLSGDLD-GGIRTFETDLSGAARNLHIGKAADIRSLDFT 621 Query: 639 LNASAASASNKLQLSIDGD--GYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLA 696 L S S ++ I G SG + L L GT +H++ A + + Sbjct: 622 LKGS-PDTSRPIRADIKGSRLSLSGGAEVVDTADLMLDGTGVQHRIRTHAAMTLDGKPFK 680 Query: 697 LQLNAHGKVTQDKNGYGWNGVIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLNVDRM 756 L+A G + ++ W G I LD G + L ++L A+ + A A Sbjct: 681 FDLDASGGINRELT--RWKGSIGILDIGGAFNLKLQNRMTLEAGAERVAASAANWQAMGG 738 Query: 757 AIDLRSLSY-QQGRIRSEGSAKTLDVGRILELVREMSGASAAAPPAKTDLVLDADWNFSL 815 +++L+ S+ ++ I ++G A L + + + PP + +LVL+ DW+ + Sbjct: 739 SLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFK---------PPFEHNLVLNGDWDVAY 789 Query: 816 AETVSGFFQVLRKSGDVSVNTGASQVALGLSALQLRVDLAGHEAK--FNGGVTASRIGTI 873 G+ + R+SGD + G ALGL+A L+ +GG +R G I Sbjct: 790 GRNARGYLNISRQSGDAVLPGGQ---ALGLNAFSLKTRFQNDRIGILLDGG---ARFGRI 843 Query: 874 EAQGQAGLLRQDGVLTLLPDSPLTAHARLNVPEVKTIGALL-GPQYSLDGKLAMDINAAG 932 A G + + ++PL ++P++ T+ L ++ G L G Sbjct: 844 NADLDIG----NAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQIGG 899 Query: 933 TLAKPRLSGAINGDS 947 + P ++ A+NG S Sbjct: 900 RVGSPSVNAAVNGSS 914 >PA2542 [S] COG2911 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 1221 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 218/821 (26%), Positives = 349/821 (42%), Gaps = 132/821 (16%) Query: 545 GKRLLPSSLDMLVAGNQLQLKGAFGAP-SDKLDIHIDA-----PQLARLGFGVAGMLKLD 598 G+R +LD+ + N++Q GA +LDI ++ PQL FG +LD Sbjct: 494 GQRWTLGNLDLRLGDNKVQGSGALDQRLQGRLDIALNRLGQLWPQL----FG-----RLD 544 Query: 599 GQL--TGSMQRPNLRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNKLQ----- 651 G+L GS+ P R G+Q+A+ + +D QA+L N + A ++ L+ Sbjct: 545 GRLDLAGSLAAPQGRLNLKGQQIAYAEQRIAGLDLQANLDARQNGTLALVASGLRSGETD 604 Query: 652 LSIDGDGYSGPDAALKQLKLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDKNG 711 L + G D +QL+L L G KL + DG++ +L A G+++ G Sbjct: 605 LGLFKANARG-DQRRQQLELDLQGAL--LKLGLAFDGQLERGNWRGRL-ARGELS--SGG 658 Query: 712 YGWNGVIDKLDNQGLPRIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGRIR 771 W KL Q R+ A + A V+GA L + + R+R Sbjct: 659 QDW-----KL--QQPARLERLADGRVNFGAHCWVSGAASLCGGEQRL------LPEPRLR 705 Query: 772 SEGSAKTLDVGRILELVREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKSGD 831 LD L + A DL LD A SG + SG Sbjct: 706 YTLRDFPLD-----SLKQWFPEDFAWQGKLNGDLQLDVP-----ARGPSGVVSLDAGSGT 755 Query: 832 VSVNTGASQVALGLSALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQDGVLTLL 891 + + V +G +L+L LA + + ++G + Q Q + Sbjct: 756 LRLRDQGQWVDVGYDSLRLESRLAPNRVDTSLDFRGPKLGELRVQAQ---------IDPR 806 Query: 892 PDS-PLTAHARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAV 950 P S PL+ L ++ + L G+L +G L PR+ G V Sbjct: 807 PASKPLSGEFSLAGLDLSLARPFVPMVEKLQGRLNGSGRLSGGLLAPRVDGR-------V 859 Query: 951 TLFDQGIQLKDGTVRIVMDDNVIDLR----QIEFHGG-------EGTLRATGKVKLGDAD 999 TL D I G + ++ +D R +E GG +G+L +G + GDA Sbjct: 860 TLSDGNI--GGGELPTSFENLSLDARIAGESLELGGGWRSGRYGQGSL--SGNLSWGDA- 914 Query: 1000 PDLNAA--IVADRLQLFASPDRQLMLSGQAKLANVNEQLRIDGKFMV---DKALFDLPKS 1054 LN A I +RL + P QL + K+ ++L I GK +V D + LP S Sbjct: 915 --LNVALNIRGNRLPVVVDPYAQLEVEPDLKIGMAGQELAISGKVLVPRGDITIRQLPPS 972 Query: 1055 SAPKLGDDVVIVRKDKDGKSRAKAGAAATSKEKLTAATEKPAGR-FAPVMNIVVDLG-NN 1112 + K+ DD VIV +E+PA R M+I V++G + Sbjct: 973 TV-KVSDDAVIV------------------------GSEQPAQRPLKMKMDIDVEVGQDK 1007 Query: 1113 FRFNGSGADLKLRGEMNVRSEPLLPLRATGTVRVSEGTYEAFGTKLNIERGIINFQGPIS 1172 F+G G +L G +++ L G + +++G Y A+G +L I R + F GPI Sbjct: 1008 LAFSGFGLSAELAGHLHIGDN----LDTRGELNLNKGRYRAYGQRLTIRRARLFFAGPID 1063 Query: 1173 NPNLNILAMRRNQDVEAGVEVTGNANQPRVRLVSEPNVPDDEKLSWMMFGH----GSDSS 1228 P L+I A+RR DV AG+ +TG+A QP + SEP + ++ LS+++ G G DS+ Sbjct: 1064 QPYLDIEAIRRVDDVVAGLRLTGSAEQPTSAVFSEPAMSQEQALSYLVLGRPMSTGEDSN 1123 Query: 1229 GLGQRSASSQALAFVGNYG-GKKIAKDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSL 1287 LG+ ++ AL G+ +IAK +G+ F + +G S V + +I++KLSL Sbjct: 1124 MLGE---AALALGLAGSAPLTGEIAKQLGIQDFQLDTEGTGNSTSVVAS--GNITDKLSL 1178 Query: 1288 GYEQSLTGAASIAKATWQLSRRWSLVARTGTIFSIWIFYSQ 1328 Y + A+ +QL++R L A +G S+ +F+ + Sbjct: 1179 RYGVGVFEPANTIALRYQLTKRLYLEAASGLASSLDLFFKR 1219 >XF1232 [S] COG2911 Uncharacterized protein conserved in bacteria Xfa Xylella fastidiosa 9a5c Length = 1179 Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 205/907 (22%), Positives = 349/907 (38%), Gaps = 101/907 (11%) Query: 436 EQVTLKQVLLTAQKARLELAGTLGTVGAMEYAFKGKLANFDPSLWMK------TGKAPAN 489 E T KQV L+ G + A+ + K +LA FDP ++ +G+ + Sbjct: 339 EHATFKQVQAATPGGLLDFTGGVTWAPALRWDLKAELAQFDPGYFIPGWNGRVSGQLTSQ 398 Query: 490 AKAGTAAHAISARINMDFDTAGSLSPELQARLNFIIHDSSYDQLPMSGSGKLQLAGKRLL 549 + T + I A + + P L L Q PM SG+ + Sbjct: 399 GRQRTVSSGIEAIVAV---------PGLNGELR---------QRPMQASGRFTFQDHQG- 439 Query: 550 PSSLDMLVAGNQLQLKGAFGAPSDKLDIHIDAPQLARLGFGVAGMLKLDGQLTGSMQRPN 609 + + + + + KG G P L + + + L L G LK L G P+ Sbjct: 440 EGAFQLGIGDSHISAKGKVG-PHLDLAVQLQSLHLNDLLPSKEGTLKGSLLLRGPAHTPD 498 Query: 610 LRATYSGRQLAFGPHHLNRVDGQADLQTDLNASAASASNKLQLSIDGDGYSGPDAALKQL 669 + +G L + + Q L+ N +L++ L + Sbjct: 499 VIVDLNGTSLRWNDYRAK--------QFALHGHLPWRGNNGKLTLQAQELE-IGTLLDSV 549 Query: 670 KLSLSGTFGEHKLAVQADGRVRNQTLALQLNAHGKVTQDKNGYGWNGVIDKLDNQGL--P 727 ++ SG L +QAD R +AL L HG V +D G W G + +L + P Sbjct: 550 RIHASGAV--ENLNLQADVR---HAMAL-LTLHGGVHRD--GARWRGDLSQLRIEPAKGP 601 Query: 728 RIALAAPLSLALAADTLVAGATRLNVDRMAIDLRSLSYQQGRIRSEGSAKTLDVGRILEL 787 AL AP + A AT L+ + + +G A L + + Sbjct: 602 AWALRAPAQFVMNAPVFTLSATCLDAQGGGALCLHADWPHEGLVLKGQALPLTL--VHPW 659 Query: 788 VREMSGASAAAPPAKTDLVLDADWNFSLAETVSGFFQVLRKSGDVSVNTGASQVALGLS- 846 + + +G S + L LD + G F+ G + + LG+ Sbjct: 660 LPKKNGRSINL---RGALTLDGHLR-PHGDAWEGSFRASSLEGGIRLGEPRYADVLGVQD 715 Query: 847 --------ALQLRVDLAGHEAKFNGGVTASRIGTIEAQGQAGLLRQDGVLTLLPDSPLTA 898 ++VDL G+ G ++A+ G P +PLT Sbjct: 716 RGELVRYDQFSVQVDLTSQHIVGKLGIGFQGNGFVDAKFNTGWD---------PYAPLTG 766 Query: 899 HARLNVPEVKTIGALLGPQYSLDGKLAMDINAAGTLAKPRLSGAINGDSLAVTLFDQGIQ 958 +N+ + + + + G + ++ GT + P L G G+ Sbjct: 767 DLYMNMSRLYWLEMFVPDIGNPRGLIEGHVSLRGTRSGPLLGGEATLRDFTAEYPSMGLN 826 Query: 959 LKDGTVRIVMDDNVIDLRQIEFHGGEGTLRATGKVK-LGDADPDLNAAIVADRLQLFASP 1017 L G R + G+GTL G + G+ +P L I + + + Sbjct: 827 LSQGQGRFTAQPDGSARILASVRSGDGTLNIDGGLSWFGENNP-LQLNIRGRNVLAYNTS 885 Query: 1018 DRQLMLSGQAKLANVNEQLRIDGKFMVDKALFDLPK-SSAPKLGDDVVIVRKDKDGKSRA 1076 + +++ + +N +++ G+ V +A DL + + +DVV++ D R Sbjct: 886 ELRIVSDPDLRFGLINNTMQLQGEVAVSEADIDLERLDRGVSVSEDVVVL--DPVDPERT 943 Query: 1077 KAGAAATSKEKLTAATEKPAGRFAPVMNIVVDLGNNFRFNGSGADLKLRGEMNVRSEPLL 1136 A + E MN+ + LG+ +G G L G+M +R+ P Sbjct: 944 ----AVSPLE----------------MNLRIVLGDKVNMSGFGLKGGLSGQMQIRARPGH 983 Query: 1137 PLRATGTVRVSEGTYEAFGTKLNIERGIINFQGPI-SNPNLNILAMRRNQDVEAGVEVTG 1195 + A G + V G Y+A+G L I RG + + I S+P +NI A RR D+ AG++V+G Sbjct: 984 EMTANGGLDV-RGRYKAYGQDLTIIRGQLVWSNNIVSDPRVNIRAQRRIADITAGIDVSG 1042 Query: 1196 NANQPRVRLVSEPNVPDDEKLSWMMFGH--GSDSSGLGQRSASSQALAFVGNYG-GKKIA 1252 A PRV++ S+P + E LS+++ G G+ SS Q+ AS+ A G ++ Sbjct: 1043 RAQSPRVQVWSDPVMSQSEALSYLVLGRKLGTASSDENQQVASAAAALSAGGGLIASQLG 1102 Query: 1253 KDIGLDQFSIGASESGLSDEQVVNLGKSISEKLSLGYEQSLTGAASIAKATWQLSRRWSL 1312 +GLD G S+S V+ GK +S KL +GY S+ G+ S+ + LSR + L Sbjct: 1103 AKLGLD--DAGISQSSTLGGSVLGFGKYLSPKLYVGYGVSMVGSGSVLTLKYLLSRGFDL 1160 Query: 1313 VARTGTI 1319 + T+ Sbjct: 1161 EVESSTV 1167