BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0125.p (873 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XF0081 [NU] COG3188 P pilus assembly protein, porin PapC Xfa Xyl... 692 0.0 YPO1709 [NU] COG3188 P pilus assembly protein, porin PapC Ype Ye... 632 e-180 PA4084 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pse... 595 e-169 PA2130 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pse... 521 e-147 PA0994 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pse... 511 e-144 >XF0081 [NU] COG3188 P pilus assembly protein, porin PapC Xfa Xylella fastidiosa 9a5c Length = 901 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/869 (44%), Positives = 538/869 (61%), Gaps = 43/869 (4%) Query: 8 FKRKPLCNMILVMLAALPSWAAHAEKKPTALAQ------------------AQFNDQFLL 49 FK++ L I + S A AE +P L Q A FN+ FL+ Sbjct: 49 FKQRVLVAAIASTCTLMMSRLACAETEPDNLGQRLLVAKADNTAPQRVAQTANFNNSFLV 108 Query: 50 RKDGKSVDLSRFKNGNPVQAGTYRADVYVNEAWMGRSDVVLRSVSDDPNNVVFCADRSFL 109 + +SVDL F GNPV AG YRAD+YVN W GR D+ R+ DD V C + L Sbjct: 109 GQ-ARSVDLGMFSRGNPVIAGLYRADLYVNGQWKGRRDMEFRNTKDD-KEAVTCMTLAML 166 Query: 110 DMAGVDFEKLSPEALAAIRQMTPESCLKLEDLIPSATALFDNAELRLNVSLPQISVRRQA 169 D G+D L+ A ++C ++ +P A A FD A RL+VS+PQ ++RR A Sbjct: 167 DELGIDTSALTDSAADM------QACKTIDQWLPDAYARFDVATQRLDVSIPQAAMRRSA 220 Query: 170 RGYVNPEFWDRGVNAAILGYNFNAY----RTSTPGLQSSTSYYLGLNGGVNLGDWRLRNF 225 RGYV+P WD GVNA +GY FN Y + + S S YLG+N G+NLGDW+ R+ Sbjct: 221 RGYVSPSLWDHGVNAGFIGYAFNWYGGRNANAINSRRRSDSAYLGINSGLNLGDWQFRHN 280 Query: 226 SALTKQSSGDTRFQNTATYLQRDLTDLKSQLTIGDTFTPGQFFDSFSFRGVRLASDDRML 285 S+ + S+ + +QN +TY QR + S LT+GD +T G+ FDS FRG+ LA+DDRML Sbjct: 281 SSYSWHSNEGSLWQNISTYAQRAFPNTSSMLTVGDAYTSGELFDSIGFRGISLATDDRML 340 Query: 286 PDSLSGYAPAVRGIARTNAKVTVSQSGNILYETTVAPGQFEINDLYATGYGGDLSVVITE 345 PDSL GYAP VRGIA++NA+V + Q+G ++Y TTVAPG F I+DLY TGYGGDL V + E Sbjct: 341 PDSLRGYAPIVRGIAQSNARVEIHQNGQLIYSTTVAPGAFVIDDLYPTGYGGDLQVTVYE 400 Query: 346 ADGSRSSFTVPYASVAQLLRPGVGRYSVTAGRTRDNGLPQVNF-VQATYERGMTNSLTLF 404 DG + F+VPY SV Q+LR G RYS+TAG+ R+N L + ++ TY+RG++N+LT + Sbjct: 401 TDGRQQQFSVPYGSVPQMLRAGSQRYSLTAGKIRNNNLSHTPYLLEGTYQRGISNALTAY 460 Query: 405 GGAQVANDYLSAVGGTALNTGIGAFSASVTQSNAKVSEQDVRSGQSYRADYSKLLKDIGT 464 G+ ++ Y++A+ G L+T +GAFS T + K+ D SG S R YSKLL T Sbjct: 461 AGSTISQRYIAAIAGAGLSTPVGAFSLDGTVARTKL-RNDTFSGTSLRLSYSKLLSPTNT 519 Query: 465 NLSLAAYRYSSSGFMRLQDLLQAKDLLAKGFPGSRIDRQRSQLQLLVNQSLGEKNGSFYL 524 N++LAAYRYS+SGF LQ+ + A D +G + I RQRSQLQL V+Q LG+ GS YL Sbjct: 520 NITLAAYRYSTSGFYGLQEAIMAMDYERRGLSTASIYRQRSQLQLTVSQQLGQY-GSLYL 578 Query: 525 SSSMQNYWNRDGSTMQYQAGYNNNWKMISYSVYLQRQKDLASGATSTQYYASASMPLGRE 584 + S + YWN+ G+T+QYQ GYN ++K +SY + R + + S + TQ + S+PLG+ Sbjct: 579 TGSARQYWNQRGNTIQYQGGYNVSYKGVSYGLSALRSQ-IPSMPSDTQMLFTVSVPLGKA 637 Query: 585 VHSPTLSTSV--SKDSAGGSSLQSTLSGVLGEDNAFSYGVSASKSPFSSNA-SVNGQYRA 641 +P + TS S+D +S + +L G G+D+A +YG++AS + S+ N QYR+ Sbjct: 638 --NPVIVTSQIGSRDGRYDNS-RVSLVGASGKDSALTYGIAASDARNSATMIDGNVQYRS 694 Query: 642 AYANVGGSYGYTNGGATQMSAQASGAIVAHPGGVTLAQSVGETIGIVEARDAEGASV-NT 700 YA + GSY + N QMS ASG+IV H G TLA G+T+ I+EA A+GA V N Sbjct: 695 RYAALSGSYSH-NRNYNQMSLGASGSIVLHSGVATLAPQRGDTMVIIEAPAAKGARVSNI 753 Query: 701 AGVRVDGRGYAVVPYMTPYRLNEIAIDPKGSSTDVELALTSQRVAPRAGAVVMLKYPTVT 760 +GVR+D RGYAVVPY++PYR+N I +DP+G+ DVEL +SQ +AP AGA+ + + T Sbjct: 754 SGVRIDSRGYAVVPYVSPYRMNTITLDPEGTDPDVELETSSQLIAPYAGAISKVTFGTRK 813 Query: 761 GRSILFQVTLPNGDGVPFGAEVLDAQGNSVGLAGQGGRVFVRASNEDQGKLLVRWGEAAN 820 GR+++ P G +PFGA+V+DA+G SVGL QG +++RA + QG+L ++WG+ A Sbjct: 814 GRALIVNARTPTGKALPFGAQVIDAEGQSVGLVAQGSLIYIRA-KDPQGRLTIKWGDQAA 872 Query: 821 AQCSVQYQLPPRPKDAKGIVFDTAEARCE 849 QC ++YQLP + F T EA C Sbjct: 873 QQCHLEYQLPANEASTRPSSFTTLEAICR 901 >YPO1709 [NU] COG3188 P pilus assembly protein, porin PapC Ype Yersinia pestis Length = 870 Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust. Identities = 358/813 (44%), Positives = 497/813 (61%), Gaps = 33/813 (4%) Query: 42 QFNDQFLLRKDGKSVDLSRFKNGNPVQAGTYRADVYVNEAWMGRSDVVLRSVSDDPNNVV 101 +F+D FL VD +R+ GNPV G + D+Y+N+ W+GR ++ S + Sbjct: 45 EFSDAFLRFP----VDATRYSEGNPVSPGERQVDIYLNDQWIGRQEMRFALPSPESKVAT 100 Query: 102 FCADRSFLDMAGVDFEKLSPEALAAIRQMTPESCLKLEDLIPSATALFDNAELRLNVSLP 161 C D D GVD KLS + + + +C L L+ A+FD+ + RL++ +P Sbjct: 101 PCFDVKLFDELGVDTAKLSSDTVKLLESRG--ACSPLSRLLEGGNAIFDDNQQRLDIQVP 158 Query: 162 QISVRRQARGYVNPEFWDRGVNAAILGYNFNAYRTSTPGLQSSTSYYLGLNGGVNLGDWR 221 Q + RQARGYV+P++WD GV AA L Y++ YR++ + S T YLGL GG+N WR Sbjct: 159 QAYLIRQARGYVHPKYWDDGVTAATLKYDYTGYRSNQNDIGSQTYQYLGLLGGLNWQSWR 218 Query: 222 LRNFSALTKQSSGDTRFQNTATYLQRDLTDLKSQLTIGDTFTPGQFFDSFSFRGVRLASD 281 L SAL + S +QN ATY++R + L S++TIGD+ T GQ FDS S+RG+ L SD Sbjct: 219 LYYRSALNRSDSQGFDYQNLATYVERAVPSLYSKMTIGDSNTDGQVFDSLSYRGIELTSD 278 Query: 282 DRMLPDSLSGYAPAVRGIARTNAKVTVSQSGNILYETTVAPGQFEINDLYATGYGGDLSV 341 DRM DS GYAP VRG+ARTNA+V V Q G +YETTV PG F I+DLY TG GG+L+V Sbjct: 279 DRMYADSQRGYAPVVRGVARTNARVVVRQQGRPIYETTVPPGPFVIDDLYPTGQGGNLNV 338 Query: 342 VITEADGSRSSFTVPYASVAQLLRPGVGRYSVTAGRTRDNGL-PQVNFVQATYERGMTNS 400 ITEADGS +F VP+AS+A+LLRPG RYS+ AG RDN + + T G++N Sbjct: 339 TITEADGSEQTFIVPFASIAELLRPGTTRYSLMAGEYRDNSMVDKPVLFMGTVRHGLSNL 398 Query: 401 LTLFGGAQVANDYLSAVGGTALNTGIGAFSASVTQSNAKVSEQDVRSGQSYRADYSKLLK 460 LT GG A YLSA G A NT +GA + +VTQ+ ++ +D + GQS Y+K L Sbjct: 399 LTGNGGMVAAEGYLSASAGLAFNTPVGAVAFNVTQAQTRLPNKDNQRGQSIGMTYAKSLP 458 Query: 461 DIGTNLSLAAYRYSSSGF------MRLQDLLQAKDL----LAKGFPG--SRID-----RQ 503 + TNL++A+Y YSS+GF MR++D LQ ++ + +P R D R+ Sbjct: 459 ETNTNLTIASYHYSSNGFYTPAEAMRMRDYLQHGEVNNTQIDSSWPNGSDRYDDSFKYRR 518 Query: 504 RSQLQLLVNQSLGEKNGSFYLSSSMQNYWNRDGSTMQYQAGYNNNWKMISYSVYLQRQKD 563 R+Q Q+ + Q L + GSFY ++++Q+YW+ M +Q GY N++K +SY+V L R +D Sbjct: 519 RNQAQVSIAQGLPDGYGSFYANANVQDYWDGRNRDMNFQFGYTNSYKSLSYNVALNRLRD 578 Query: 564 LASGATSTQYYASASMPLGREVHSPTLSTSVSKDSAGGSSLQSTLSGVLGEDNAFSYGVS 623 + SG Q S S+PLG +P LS+S S ++ G S++Q+ +SG GEDN FSYGVS Sbjct: 579 IPSGDWDNQLSVSLSIPLGTHAGAPRLSSSYS-NTRGSSAIQTGVSGSAGEDNQFSYGVS 637 Query: 624 ASKSPFSSNAS-----VNGQYRAAYANVGGSYGYTNGGATQMSAQASGAIVAHPGGVTLA 678 A+ + N S NG ++A YA VGGSY +N Q SA SG +VA+ GGV LA Sbjct: 638 AANNRSDENGSYNTLGANGSWQAPYATVGGSYSKSN-SYDQASASLSGGVVAYRGGVILA 696 Query: 679 QSVGETIGIVEARDAEGASVNT-AGVRVDGRGYAVVPYMTPYRLNEIAIDPKGSSTDVEL 737 ++G+T+GI+EA DA GA V + + + +D RG A++PY++PYR NE+ +DPKG S DVE Sbjct: 697 PALGDTVGIIEAPDAAGARVGSYSSMYLDRRGRAILPYLSPYRQNEVELDPKGLSADVEF 756 Query: 738 ALTSQRVAPRAGAVVMLKYPTVTGRSILFQVTLPNGDGVPFGAEVLDAQGNSVGLAGQGG 797 TSQ+VAP AGAV ++ + T TG S+L + L + +PFGAEV D G VG QGG Sbjct: 757 KSTSQKVAPTAGAVALVTFETSTGYSVLVRGHLADNTPLPFGAEVKDGGGTRVGFIAQGG 816 Query: 798 RVFVRASNEDQGKLLVRWGEAANAQCSVQYQLP 830 + VR N+ G L V WG+ CS Y+LP Sbjct: 817 QAMVRV-NQQAGNLRVIWGDGIGESCSFDYKLP 848 >PA4084 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pseudomonas aeruginosa Length = 844 Score = 595 bits (1534), Expect = e-169, Method: Compositional matrix adjust. Identities = 346/808 (42%), Positives = 482/808 (59%), Gaps = 23/808 (2%) Query: 43 FNDQFL-LRKDGKSVDLSRFKNGNPVQAGTYRADVYVNEAWMGRSDVVLRSVSDDPNNVV 101 F+ Q L L G+S+D SRF+ G+ ++ G YR D+ +N W G +V LR + V Sbjct: 19 FDAQMLALGPGGRSIDTSRFERGDVIEPGRYRLDLLLNSRWRGVEEVELRR-QPGRESAV 77 Query: 102 FCADRSFLDMAGVDFEKLSP-EALAAIRQMTPE--SCLKLEDLIPSATALFDNAELRLNV 158 FC DR L+ AG+D EK + + ++ R PE C LE +P A D AE + V Sbjct: 78 FCYDRGLLERAGIDLEKSARGQDRSSARDPLPEGLHCDPLERYVPGARVKLDIAEQSIYV 137 Query: 159 SLPQISVR-RQARGYVNPEFWDRGVNAAILGYNFNAYRTSTPGLQSSTSYYLGLNGGVNL 217 S+P + ++ YV+P WD G++AA+L YN N + G +S+TS Y G+N G N Sbjct: 138 SVPSYYLSLDSSKTYVDPASWDSGISAALLNYNSNLHVRENHG-RSATSGYAGMNAGFNF 196 Query: 218 GDWRLRNFSALTKQSSGDTRFQNTATYLQRDLTDLKSQLTIGDTFTPGQFFDSFSFRGVR 277 G RLR+ T + +Q +ATY+Q DL ++QL +G+ T +FFD+ SFRGV+ Sbjct: 197 GRARLRHNGTATWSRRMGSHYQRSATYVQTDLPAWRAQLLLGENSTSSEFFDAVSFRGVQ 256 Query: 278 LASDDRMLPDSLSGYAPAVRGIARTNAKVTVSQSGNILYETTVAPGQFEINDLYATGYGG 337 L+SDDRMLPDSL YAP VRG A TNA+V+V Q G ++YETTVAPG F +++L YGG Sbjct: 257 LSSDDRMLPDSLRYYAPVVRGTASTNARVSVYQRGYLIYETTVAPGAFALDELQTASYGG 316 Query: 338 DLSVVITEADGSRSSFTVPYASVAQLLRPGVGRYSVTAGRTRDNGLP-QVNFVQATYERG 396 DL V +TEA G SF VP+A+ QLLRPG RYS+TAGR D L + N +Q Y+RG Sbjct: 317 DLEVRVTEASGEVRSFIVPFATTVQLLRPGTTRYSLTAGRLNDPSLERRPNMLQGVYQRG 376 Query: 397 MTNSLTLFGGAQVANDYLSAVGGTALNTGIGAFSASVTQSNAKVSEQDVRSGQSYRADYS 456 + N +T + G Y+S + G ALNT +G FS VT + +V D SG SYR YS Sbjct: 377 LGNDVTAYAGGAFTGSYMSGLMGAALNTPVGGFSGDVTLARTEVPGDDRLSGSSYRLAYS 436 Query: 457 KLLKDIGTNLSLAAYRYSSSGFMRLQDLLQAKDLLAKGFPGSRIDRQRSQLQLLVNQSLG 516 K L + GTN SL AYRYS+ G++ L+D +D + +G P R R++L ++Q LG Sbjct: 437 KNLPNTGTNFSLLAYRYSTGGYLGLRDAAFMQDRVERGEPLESFSRLRNRLDANISQQLG 496 Query: 517 EKNGSFYLSSSMQNYWNRDGSTMQYQAGYNNNWKMISYSVYLQRQKDLAS--------GA 568 G+ YL+ S Q YW+ G + + GY+N W+ +SYS+ QR + G Sbjct: 497 -NGGNLYLNGSSQRYWSGGGRAVNFSVGYSNQWRDVSYSISAQRLRSQYEGFSSGDRRGE 555 Query: 569 TSTQYYASASMPLGREVH-SPTLSTSVSKDSAGGSSLQSTLSGVLGEDNAFSYGVSASKS 627 TST + + S+PLG SPTLS+ +++DS G+ L S +SG+LG+ SY +SAS Sbjct: 556 TSTLFSLNLSIPLGGAGRGSPTLSSYLTRDSNSGTQLTSGVSGMLGKRGEASYSLSASHD 615 Query: 628 PFS--SNASVNGQYRAAYANVGGSYGYTNGGATQMSAQASGAIVAHPGGVTLAQSVGETI 685 S ++ S + YR +G S G Q+S +A+G +VAH GG+T AQ++GETI Sbjct: 616 RDSRQTSKSASLDYRLPQVELGSSLS-QGPGYRQLSVKAAGGLVAHSGGITAAQTLGETI 674 Query: 686 GIVEARDAEGASVNTAGVRVDGRGYAVVPYMTPYRLNEIAIDPKGSSTDVELALTSQRVA 745 G+V A +A GA+ +G R+D GYAV+P + PY+LN + +DP G + ++EL +S+ VA Sbjct: 675 GLVHAPNARGAAAGYSGSRIDRHGYAVIPNLLPYQLNSVDLDPNGMADEIELRSSSRNVA 734 Query: 746 PRAGAVVMLKYPTVTGRSILFQVTLPNGDGVPFGAEVLDAQ-GNSVGLAGQGGRVFVRAS 804 P AGAVV L YPT R +L +P+G+ +PF AEVLDA G SVG GQG R+ +R Sbjct: 735 PTAGAVVRLDYPTRVARPLLVDSRMPSGEPLPFAAEVLDAHSGQSVGAVGQGSRLVLRV- 793 Query: 805 NEDQGKLLVRWGEAANAQCSVQYQLPPR 832 +D+G + VRWG QC V Y L PR Sbjct: 794 EQDRGSVRVRWGNEPQQQCLVDYALGPR 821 >PA2130 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pseudomonas aeruginosa Length = 872 Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust. Identities = 343/866 (39%), Positives = 486/866 (56%), Gaps = 55/866 (6%) Query: 7 TFKRKPLCNMILVMLAALPSWAAHAEKKPTALAQAQ----FNDQFLLRKDGKSVDLSRFK 62 T++ + C ++A + AA +A AQ F+D+ LL DLSRF Sbjct: 2 TYRHERRCRTGTALMAGGMALAA------SAFGHAQPGYEFDDRLLLGSSLGGGDLSRFN 55 Query: 63 NGNPVQAGTYRADVYVNEAWMGRSDVVLRSVSDDPNNVVFCADRSFLDMAGVDFEKLSPE 122 + G Y DVY+NE + RS+V R+ + V C D FL ++L + Sbjct: 56 QDGRIDPGRYHVDVYLNERFASRSEVSFRA-NPASGAVEPCLDEDFLR------QRLGAK 108 Query: 123 ALAAIRQMTP-ESCLKLEDLIPSATALFDNAELRLNVSLPQISVRRQARGYVNPEFWDRG 181 R+ C L +P + D A LRL++S+PQ + + RGYV+PE WD G Sbjct: 109 PGDDPRKSGDGRHCAFLGARLPGSRFSLDVARLRLDLSVPQALLDLKPRGYVSPEEWDAG 168 Query: 182 VNAAILGYNFNAYRTSTPGLQSSTS--YYLGLNGGVNLGDWRLRNFSALT-KQSSGDTR- 237 + + Y+ N YR+ G +S S Y+GLN G+NLG WRLR+ S T + +G R Sbjct: 169 DSMGFVNYDTNLYRSEYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYTYSRYNGQARR 228 Query: 238 -FQNTATYLQRDLTDLKSQLTIGDTFTPGQFFDSFSFRGVRLASDDRMLPDSLSGYAPAV 296 + + TY QR L +S+LT G+++T G S +RG+ LA+DDRMLP+SL YAP V Sbjct: 229 KWNSIRTYAQRALPAWRSELTAGESYTAGNLLGSIGYRGLSLATDDRMLPESLRRYAPQV 288 Query: 297 RGIARTNAKVTVSQSGNILYETTVAPGQFEINDLYATGYGGDLSVVITEADGSRSSFTVP 356 RG A T A+V +SQ+G + E VAPG F I+DLY + Y GDL V + EADGS SSF+VP Sbjct: 289 RGTAATAARVVISQNGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVP 348 Query: 357 YASVAQLLRPGVGRYSVTAGRTRDNGLPQVNFVQATYERGMTNSLTLFGGAQVANDYLSA 416 +ASV + +RPG+ RYS T G+ R G F TY+RGM+N+LT G +VA+DYL+ Sbjct: 349 FASVPESMRPGLSRYSFTLGQARQYGDGDDLFADFTYQRGMSNALTANLGLRVADDYLAM 408 Query: 417 VGGTALNTGIGAFSASVTQSNAKVSEQDVRSGQSYRADYSKLLKDIGTNLSLAAYRYSSS 476 +GG L T GAF + T S+A+V + + G DYS+ + GT L+LA YRYS+ Sbjct: 409 LGGGVLATRFGAFGLNSTYSSARVEDGARKQGWRIGLDYSRTFQPTGTTLTLAGYRYSTE 468 Query: 477 GFMRLQDLLQAKDLLAKGFP-GSRIDRQRSQLQLLVNQSLGEKNGSFYLSSSMQNYWNRD 535 G+ L D+L ++D L G S +QR+Q LLV+Q+LG G+ YLS S ++++ Sbjct: 469 GYRELGDVLGSRDALRHGDTWDSGSYKQRNQFNLLVSQALG-GYGNLYLSGSSSDFYDGK 527 Query: 536 GSTMQYQAGYNNNWKMISYSVYLQRQ-------------------KDLASGATSTQYYAS 576 Q Q GY+N W +SY++ RQ +D SG + S Sbjct: 528 SRDTQLQFGYSNTWGQLSYNLAWSRQTTTYYQEQGDQDPGVELLRRDRRSGQRNDTLTLS 587 Query: 577 ASMPLGREVHSPTLS---TSVSKDSAGGSSLQSTLSGVLGEDNAFSYGVSASKSPFSSNA 633 SMPLG +PTLS T S DS GG SLQ+ L+G LG++ +SY +SA++ ++ Sbjct: 588 VSMPLGSSSRAPTLSAMATRRSGDSRGG-SLQTGLNGTLGDERTWSYALSANRDSEVADT 646 Query: 634 SVNG--QYRAAYANVGGSYGYTNGGA-TQMSAQASGAIVAHPGGVTLAQSVGETIGIVEA 690 + NG Q +AA A V GY G Q S GA+VAH G+TL SVG+T +VEA Sbjct: 647 TWNGTLQKQAALATVNA--GYAQGDRYRQYSGGIRGALVAHRDGLTLGPSVGDTFALVEA 704 Query: 691 RDAEGASVNTA-GVRVDGRGYAVVPYMTPYRLNEIAIDPKGSSTDVELALTSQRVAPRAG 749 + A GA++ G R+DG GYA+ P ++PYR N I++DP G D EL T ++VAP AG Sbjct: 705 KGASGAAIRGGQGARIDGNGYALAPSLSPYRYNPISLDPVGIDPDAELLETERKVAPYAG 764 Query: 750 AVVMLKYPTVTGRSILFQVTLPNGDGVPFGAEVLDAQGNSVGLAGQGGRVFVRASNEDQG 809 A V + + T+TG +L Q +G +P GA V+D G ++G+ GQGG+V+ RA N+ +G Sbjct: 765 ASVRVTFRTLTGHPLLIQARREDGSVLPLGAVVVDDGGAAIGMVGQGGQVYARAENQ-RG 823 Query: 810 KLLVRWGEAANAQCSVQYQLPPRPKD 835 +LLV+WG A +C + Y L +D Sbjct: 824 RLLVQWGTARKERCELPYDLAGVSRD 849 >PA0994 [NU] COG3188 P pilus assembly protein, porin PapC Pae Pseudomonas aeruginosa Length = 839 Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust. Identities = 314/811 (38%), Positives = 453/811 (55%), Gaps = 25/811 (3%) Query: 35 PTALAQAQFNDQFLLRKDGKSVDLSRFKNGNPVQAGTYRADVYVNEAWMGRSDVVLRSVS 94 P +FN +FL + G V+L F+NGN V GTY D+++N+ + R DVV S Sbjct: 29 PAVTFAVEFNAEFLNNEGGAPVELKYFENGNSVSPGTYSVDIHLNQIMIRREDVVF-SAD 87 Query: 95 DDPNNVVFCADRSFLDMAGVDFEKLSPEAL--AAIRQMTPESCLKLEDLIPSATALFDNA 152 + +V L GVD +L+ + L A + TP L + +LIP A+ FD Sbjct: 88 SETGSVRPVIRVGLLKEIGVDIARLTRDKLIPANLENNTP---LNVAELIPGASVEFDVN 144 Query: 153 ELRLNVSLPQISVRRQARGYVNPEFWDRGVNAAILGYNFNAYRTSTPGLQSSTSYYLGLN 212 L L VS+PQ+ V+R +RGYV+P WD GV A Y N R + G Q+S YLGL Sbjct: 145 SLSLLVSIPQLYVQRHSRGYVDPSLWDDGVTALFSNYQANFTRNTNFG-QNSDYRYLGLR 203 Query: 213 GGVNLGDWRLRNFSALTKQSSGDTRFQNTATYLQRDLTDLKSQLTIGDTFTP--GQFFDS 270 G NL WRLRN S+L+ + +F + TY++RD+ LK L++G+ +T G F+S Sbjct: 204 NGFNLFGWRLRNDSSLSGGTGMRNKFSSNRTYVERDIRALKGTLSLGELYTSAQGDAFES 263 Query: 271 FSFRGVRLASDDRMLPDSLSGYAPAVRGIARTNAKVTVSQSGNILYETTVAPGQFEINDL 330 RGV+L SD MLPD+ Y P VRGIA TNA V VSQ+G ++Y T V PG FEI D+ Sbjct: 264 VRMRGVQLQSDIGMLPDNEISYTPVVRGIAETNATVEVSQNGFVIYSTNVPPGAFEITDI 323 Query: 331 YATGYGGDLSVVITEADGSRSSFTVPYASVAQLLRPGVGRYSVTAGRTRDNGLPQVNFVQ 390 Y +G GDL V I EADG + SF Y+ + + R G RY + AG ++G P VN +Q Sbjct: 324 YPSGSNGDLEVKIIEADGRQRSFKQSYSYLPVMTRKGNLRYGLAAGEYHNDGQPSVNLLQ 383 Query: 391 ATYERGMTNSLTLFGGAQVANDYLSAVGGTALNTGIGAFSASVTQSNAKVSEQDVRSGQS 450 + G+++ +T FGG A Y + G NT +G SA VT S ++ GQS Sbjct: 384 GSAVYGLSDRVTGFGGLLAAEKYNATNLGLGFNTPLGGLSADVTHSQSRTRRGGRNQGQS 443 Query: 451 YRADYSKLLKDIGTNLSLAAYRYSSSGFMRLQDLLQAKDLLAKGFP-GSRIDRQRSQLQL 509 R YSK + T+ ++ YRYS+ G+ L + D+ + + GS RQ+S++ L Sbjct: 444 LRLLYSKTINATETSFTVVGYRYSTEGYRTLSQHID--DMSDESYLYGSSSSRQKSRIDL 501 Query: 510 LVNQSLGEKNGSFYLSSSMQNYWNRDGSTMQYQAGYNNNWKMISYSVYLQRQKDLAS-GA 568 VNQ+L ++ S YL++ YWNR GS+ + Q G+++ K SYS+ + R ++ S G Sbjct: 502 TVNQTLFRRS-SLYLTAGETTYWNRPGSSRRVQFGFSSGIKRASYSLAVSRTQETGSFGR 560 Query: 569 TSTQYYASASMPLGREVHSPTLSTSVSKDSAGGSSLQSTLSGVLGEDNAFSYGVSASKSP 628 + TQ+ AS S+PLG S + + G SSL + +SG L E NAF+Y A+ S Sbjct: 561 SDTQFTASVSIPLGGSARSSQVYANAVSSQHGDSSLNTGISGYLDEANAFNYSAQANYSK 620 Query: 629 FSSNA-SVNGQYRAAYANVGGSY--GYTNGGATQMSAQASGAIVAHPGGVTLAQSVGETI 685 N+ SV + + A + +Y G N Q++ ASG++V HPGGVT Q VGET Sbjct: 621 DGGNSGSVGLGWDTSKAKLSANYSQGRDN---KQINLGASGSVVVHPGGVTFGQPVGETF 677 Query: 686 GIVEARDAEGASVN-TAGVRVDGRGYAVVPYMTPYRLNEIAIDPKGSSTDVELALTSQRV 744 G+VE + G ++ + VR DGRGYAV+PYM PYR N + +D +D E++ ++Q Sbjct: 678 GLVEVPEVGGVGLDGYSSVRTDGRGYAVLPYMQPYRYNWVNLDTNTLGSDTEISDSTQMA 737 Query: 745 APRAGAVVMLKYPTVTGRSILFQVTLPNGDGVPFGAEVLDAQGNSVGLAGQGGRVFVRAS 804 P GAV+ ++ +GR + F +++ +G +PFGA+ D + VG+ R+ V Sbjct: 738 VPTRGAVIAKRFSAESGRRVQFDLSMDSGGKIPFGAQAYDKEERVVGMVDNLSRLLVFGI 797 Query: 805 NEDQGKLLVRWGEAANAQCSVQYQLPPRPKD 835 EDQG+L +RW + + CSV YQLPPR KD Sbjct: 798 -EDQGRLSIRWSDGS---CSVDYQLPPRNKD 824