BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0112.p (250 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb21638 Non COG 300 2e-81 ydbP [S] COG3396 Uncharacterized conserved protein Eco Escherich... 271 1e-72 RSp0606 [S] COG3396 Uncharacterized conserved protein Rso Ralsto... 192 7e-49 DR2384 [S] COG3396 Uncharacterized conserved protein Dra Deinoco... 150 2e-36 BH0198 [S] COG3396 Uncharacterized conserved protein Bha Bacillu... 77 3e-14 >SMb21638 Non COG Length = 261 Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 143/240 (59%), Positives = 177/240 (73%), Gaps = 1/240 (0%) Query: 11 LGDNALILSQRLSEWCGKGPALEEDMALTNVALDLIGQARLWLSYAAELEAAGRNEDQLA 70 +GDN LIL RLSEWCG PALEED+AL N ALDLIGQ +LWL A E+E GR+ D LA Sbjct: 23 MGDNTLILGHRLSEWCGHAPALEEDIALANTALDLIGQTQLWLGLAGEVEGKGRSADDLA 82 Query: 71 FLRDAHQFSNVLLVEQPNGNYADTLVRQFFFDAAHYFLLEALTTSTDPRIAGIAQKSIKE 130 +LRDA F N+LL E+PNG+Y TL+RQF FDA HY L+ L +S +PRIA IA+K+ KE Sbjct: 83 YLRDARDFRNLLLTERPNGDYGGTLMRQFLFDAWHYLALKGLRSSCEPRIAAIAEKASKE 142 Query: 131 VTYHVRRSGDLIVRLGDGTELSHRMVQQAVDYLWPYTGELFSSDAADLAMQQEGVAPAPD 190 V YH+ RS DL++RLGDGT SH +Q+A+ +WPYTGE+F S A DL + GVAP P+ Sbjct: 143 VAYHLERSRDLVIRLGDGTAESHARMQEALVDIWPYTGEMFVSAAHDLVLAAAGVAPEPE 202 Query: 191 AIRAQWLQHVQEILTEATLQTPPADAWMQSGGKQGKHTEHLGFLLAEMQFLQRAYPGATW 250 ++A+W E L ATL+ P D +M GGK+G HTEHLG++LAEMQFLQRAYPGA+W Sbjct: 203 NLKAEWHALAAETLRAATLEKPE-DRYMHKGGKRGLHTEHLGYVLAEMQFLQRAYPGASW 261 >ydbP [S] COG3396 Uncharacterized conserved protein Eco Escherichia coli K12 Length = 248 Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 136/250 (54%), Positives = 174/250 (69%), Gaps = 2/250 (0%) Query: 1 MSDKATYVRRLGDNALILSQRLSEWCGKGPALEEDMALTNVALDLIGQARLWLSYAAELE 60 M+ Y RLGDN L+LSQRL EWCG P LE D+AL N+ LDL+GQAR +LSYAAEL Sbjct: 1 MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELA 60 Query: 61 AAGRNEDQLAFLRDAHQFSNVLLVEQPNGNYADTLVRQFFFDAAHYFLLEALTTSTDPRI 120 G +ED LAF RD QFSN+LLVEQPNGN+ADT+ RQ+F DA H L L S DP++ Sbjct: 61 GEG-DEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDPQL 119 Query: 121 AGIAQKSIKEVTYHVRRSGDLIVRLGDGTELSHRMVQQAVDYLWPYTGELFSSDAADLAM 180 A I+ K+IKE YH+R S + RLG+GT++S + +QQA++ LW +T ELF +D D+A+ Sbjct: 120 AAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDADEIDIAL 179 Query: 181 QQEGVAPAPDAIRAQWLQHVQEILTEATLQTPPADAWMQSGGKQGKHTEHLGFLLAEMQF 240 +EG+A P +RA W V + EATL P A+ ++GGK+G HTEHLG +LAEMQ+ Sbjct: 180 SEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAY-RTGGKKGLHTEHLGPMLAEMQY 238 Query: 241 LQRAYPGATW 250 LQR PG W Sbjct: 239 LQRVLPGQQW 248 >RSp0606 [S] COG3396 Uncharacterized conserved protein Rso Ralstonia solanacearum Length = 268 Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 122/259 (47%), Positives = 160/259 (61%), Gaps = 16/259 (6%) Query: 7 YVRRLGDNALILSQRLSEWCGKGPALEEDMALTNVALDLIGQARLWLSYAAELEAA---- 62 YV RL D+ALIL QR +EW G GP LEED+AL+N++LDLIGQARL ++A LE Sbjct: 11 YVLRLADSALILGQRNAEWTGHGPVLEEDIALSNLSLDLIGQARLLYTHAGRLEGKLTGM 70 Query: 63 GRNEDQLAFLRDAHQFSNVLLVEQPNG-----------NYADTLVRQFFFDAAHYFLLEA 111 R+ED A+ RD F N L+E P+ +YA T+VR F + A L EA Sbjct: 71 PRSEDDYAYWRDEPAFRNYTLLELPHAGPLCGTAAGSRDYAVTIVRHFLYAALMVPLWEA 130 Query: 112 LTTSTDPRIAGIAQKSIKEVTYHVRRSGDLIVRLGDGTELSHRMVQQAVDYLWPYTGELF 171 L S D +A IA KS+KE+ YH+ + D +VR GDGT SH Q A+D+L PYT E F Sbjct: 131 LAASADAELAAIAAKSVKEMRYHLAHTLDWLVRFGDGTAQSHARAQAALDWLMPYTNEFF 190 Query: 172 SSDAADLAMQQEGVAPAPDAIRAQWLQHVQEILTEATLQTPPADAWMQSGGKQGKHTEHL 231 ++DA + A+ + G+ P +R W V++ L EATL P A ++ S GK G H+EH+ Sbjct: 191 AADAVEEAVAEAGIGVRPAQVRGAWEATVRDTLDEATLTWPDAGPYV-STGKHGIHSEHM 249 Query: 232 GFLLAEMQFLQRAYPGATW 250 G+LLAEMQ L R +PGATW Sbjct: 250 GYLLAEMQGLARQFPGATW 268 >DR2384 [S] COG3396 Uncharacterized conserved protein Dra Deinococcus radiodurans Length = 263 Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 2/238 (0%) Query: 11 LGDNALILSQRLSEWCGKGPALEEDMALTNVALDLIGQARLWLSYAAELEAAGRNEDQLA 70 L D+ ++L+ R EW G P LEED+AL N+A D +G A L+L +L+ G D+LA Sbjct: 25 LADDEIVLAHRGGEWTGHAPILEEDIALANIAQDELGHAALYLGLRTDLD--GSQPDRLA 82 Query: 71 FLRDAHQFSNVLLVEQPNGNYADTLVRQFFFDAAHYFLLEALTTSTDPRIAGIAQKSIKE 130 R A +++N L E P G++A T+VRQF +DA LE +S +A +A K+++E Sbjct: 83 MFRSASEYTNTRLTELPKGDWAVTMVRQFLYDAYEALWLEEAGSSRYAPLAEVAHKALRE 142 Query: 131 VTYHVRRSGDLIVRLGDGTELSHRMVQQAVDYLWPYTGELFSSDAADLAMQQEGVAPAPD 190 +H++ + + RL GTE S R Q A++ LW + +LF A + + G+ P P Sbjct: 143 EKFHLQHTALWVERLALGTEESERRTQTALNELWSHAAQLFQPVAGEEELIAAGIVPDPA 202 Query: 191 AIRAQWLQHVQEILTEATLQTPPADAWMQSGGKQGKHTEHLGFLLAEMQFLQRAYPGA 248 A++A+W + V L T P + + HTE+L LLAEMQ + R +P A Sbjct: 203 ALKARWEKLVTAHLQGKCGLTLPRGTFTSDDRGRDHHTEYLAPLLAEMQEVARQHPDA 260 >BH0198 [S] COG3396 Uncharacterized conserved protein Bha Bacillus halodurans Length = 271 Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 19/234 (8%) Query: 10 RLGDNALILSQRLSEWCGKGPALEEDMALTNVALDLIGQARLWLSYAAELEAAGRNE-DQ 68 +L D+ I++ R SEW G P +EED+A +++ + +G A ++ LE G + D Sbjct: 26 QLADDDYIVAYRGSEWLGLAPHIEEDVAFSSITQNTMGHAVMFYEL---LEQLGEGDADT 82 Query: 69 LAFLRDAHQFSNVLLVEQPNG----------NYADTLVRQFFFDAAHYFLLEALTTSTDP 118 LA RD N + +E+ NG ++A T++R FF++ LEALT S+ Sbjct: 83 LAHERDPALRRNSVYLEKKNGSGTYLDEPHYDWALTVIRHFFYETFKKIRLEALTQSSYV 142 Query: 119 RIAGIAQKSIKEVTYHVRRSGDLIVRLGDGTELSHRMVQQAVDYLWPYTGELFSSDAADL 178 +A AQ+ + E YH+ + +L TE + + + +D W ++ Sbjct: 143 PLAKAAQRVLMEQPYHLAHWKTWLCQLQQSTEEAKNRLMERIDEAWLEILDMLELGLKGG 202 Query: 179 AMQQEGVAPAPDAIRAQWLQHVQEILTEATLQTPPADAWMQSG-GKQGKHTEHL 231 M + + I+ QW++ + + L P Q G G+ G+HT+ L Sbjct: 203 EMVEYQLITDEATIQQQWVKEMNKSL----FYVPSQSLQKQEGNGRNGEHTDDL 252