BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0078.p (299 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2157 [S] COG1801 Uncharacterized conserved protein Pae Pseudom... 364 e-100 mlr0752 [S] COG1801 Uncharacterized conserved protein Mlo Mesorh... 207 3e-53 SMc01236 [S] COG1801 Uncharacterized conserved protein Sme Sinor... 206 7e-53 AGc2792 [S] COG1801 Uncharacterized conserved protein Atu Agroba... 193 4e-49 CC3109 Non COG 176 5e-44 >PA2157 [S] COG1801 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 312 Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/292 (59%), Positives = 217/292 (74%) Query: 2 AKIRIGISGWRYAPWRGGFYPEDLAQADELQFASRVLPSIELNGSFYALQRPQSYAAWYD 61 A++RIGISGWRYAPWRG FYPE L Q DEL+FASR + SIE+NG+FYALQ P+ + W + Sbjct: 5 ARLRIGISGWRYAPWRGDFYPEGLRQKDELRFASRAVNSIEINGTFYALQTPERFRGWAE 64 Query: 62 ATPPGFMFSIKGNRFITHIQRLRDIEGPLANVFASGVFNLKEKLGPFLWQFPPSFRYDAE 121 TP F+FS+K R+ITH++RLR+I+ PLAN FASG L+++LGPFLWQFPPS R+D E Sbjct: 65 DTPEDFVFSVKAPRYITHVRRLREIDEPLANFFASGPLALRQRLGPFLWQFPPSMRFDRE 124 Query: 122 LVEHFLSLLPHDTEAALELAQQCEPRMKERSLLAIDKKRTMRHAMEIRHESFIDEGFIAL 181 L FL+ LP D AA +LA+ R+ L D + +RHA+EIRHESF+D FI L Sbjct: 125 LFADFLARLPRDGAAAQKLARHSAARLHREGYLDGDPAQRLRHAVEIRHESFVDPTFIEL 184 Query: 182 LRKYNVALVVADTAGKWPYLEDVTADFMYLRLHGDKELYASGYTKPALERWARRIEAWSK 241 LR+Y VALVVADTAGKWP L DV ADF+YLRLHGDKELY SGY++ AL +W RI AW+ Sbjct: 185 LREYRVALVVADTAGKWPLLGDVCADFLYLRLHGDKELYRSGYSEAALGQWQARIRAWAG 244 Query: 242 GGQPKDAQCASASQPKARKSRDIYCYFDNDIKVKAPFDARRLIARLGLEKEL 293 GGQ D + AS P +RD+YCYFDND+KV+AP+DARRL+ L L+ L Sbjct: 245 GGQADDLRRASQDAPAKATARDLYCYFDNDVKVRAPYDARRLLQLLELDGGL 296 >mlr0752 [S] COG1801 Uncharacterized conserved protein Mlo Mesorhizobium loti Length = 268 Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 108/284 (38%), Positives = 160/284 (56%), Gaps = 24/284 (8%) Query: 4 IRIGISGWRYAPWRGGFYPEDLAQADELQFASRVLPSIELNGSFYALQRPQSYAAWYDAT 63 IR G+ GW + PW FYP+ L++A +LQ+ASR +PSIE+NG++Y+ + ++ W Sbjct: 7 IRSGMGGWTFEPWDTSFYPDKLSKAKQLQYASRQVPSIEVNGTYYSSFKEPTFVKWASEA 66 Query: 64 PPGFMFSIKGNRFITHIQRLRDIEGPLANVFASGVFNLKEKLGPFLWQFPPSFRYDAELV 123 P GF++S+KGNRF+T+ + L + + SGV L +KLGP LWQF P+ ++D + Sbjct: 67 PDGFVYSLKGNRFVTNRRVLGEAGESMMRFLGSGVAALGDKLGPILWQFAPTKKFDPDDF 126 Query: 124 EHFLSLLPHDTEAALELAQQCEPRMKERSLLAIDKKRTMRHAMEIRHESFIDEGFIALLR 183 E FL LLP + +RHA+E+R++SF F AL R Sbjct: 127 EAFLKLLPEKQDGV-----------------------ALRHALEVRNDSFFVPEFAALAR 163 Query: 184 KYNVALVVADTAGKWPYLEDVTADFMYLRLHGDKELYASGYTKPALERWARRIEAWSKGG 243 KY A+V AD A K+P + DVT DF+Y RL + YT L+ WA R + W++G Sbjct: 164 KYKAAIVYADHA-KYPDIADVTGDFVYARLQTGSDDNPDCYTPKGLDEWAARAKIWAEGK 222 Query: 244 QPKDAQCASASQPKARKSRDIYCYFDNDIKVKAPFDARRLIARL 287 QP D + A + + RD++ YF + KV+APF A L+ R+ Sbjct: 223 QPADLRRADPATDAPVQPRDVFVYFITEGKVRAPFGAMALMKRI 266 >SMc01236 [S] COG1801 Uncharacterized conserved protein Sme Sinorhizobium meliloti Length = 267 Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 103/287 (35%), Positives = 161/287 (56%), Gaps = 24/287 (8%) Query: 2 AKIRIGISGWRYAPWRGGFYPEDLAQADELQFASRVLPSIELNGSFYALQRPQSYAAWYD 61 +IR+GI GW + PW G FYP+DL + +L+FA + L +IE+NG++Y+ Q+P ++A W Sbjct: 5 GQIRVGIGGWNFEPWEGTFYPDDLPKKRQLEFAGKELRTIEVNGTYYSSQKPATFAKWAA 64 Query: 62 ATPPGFMFSIKGNRFITHIQRLRDIEGPLANVFASGVFNLKEKLGPFLWQFPPSFRYDAE 121 P GF+FS+K +RF+T+ + L + + G+ L ++LGP LWQF P+ ++DAE Sbjct: 65 EVPDGFIFSLKASRFVTNRRVLSEAGESMERFLTQGLTELGDRLGPILWQFAPTKKFDAE 124 Query: 122 LVEHFLSLLPHDTEAALELAQQCEPRMKERSLLAIDKKRTMRHAMEIRHESFIDEGFIAL 181 E FL LLP + +RH +E+R+ SF F+ L Sbjct: 125 DFEGFLKLLPEKQDGL-----------------------KLRHVVEVRNPSFQVPDFVKL 161 Query: 182 LRKYNVALVVADTAGKWPYLEDVTADFMYLRLHGDKELYASGYTKPALERWARRIEAWSK 241 + KY VA+V+A+ A +P + DVT DF+Y RL + + Y L+RWA R++ ++ Sbjct: 162 IEKYKVAVVLAEHA-DYPMIADVTGDFVYARLQKGSDEVKTCYPPKDLDRWAERLKTFAA 220 Query: 242 GGQPKDAQCASASQPKARKSRDIYCYFDNDIKVKAPFDARRLIARLG 288 GG+P D + A+ + RD++ +F KV AP AR L R+G Sbjct: 221 GGEPDDLEKAAPERQPETAPRDVFAFFITSGKVNAPNGARELQKRVG 267 >AGc2792 [S] COG1801 Uncharacterized conserved protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 271 Score = 193 bits (491), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 153/282 (54%), Gaps = 24/282 (8%) Query: 2 AKIRIGISGWRYAPWRGGFYPEDLAQADELQFASRVLPSIELNGSFYALQRPQSYAAWYD 61 IR GI GW + PW G FYPE L + +L+ ASR L +IE+NG++Y+ Q+P+++A W Sbjct: 10 GTIRTGIGGWTFEPWEGTFYPEKLTKKRQLEHASRQLTAIEVNGTYYSSQKPETFAKWAS 69 Query: 62 ATPPGFMFSIKGNRFITHIQRLRDIEGPLANVFASGVFNLKEKLGPFLWQFPPSFRYDAE 121 P F+FS+K +RF+T+ + L + + G+ L LGP LWQF P+ ++DA+ Sbjct: 70 EVPDDFIFSLKASRFVTNRRVLAEAGESMTKFLTQGLTELGSHLGPILWQFAPTKKFDAD 129 Query: 122 LVEHFLSLLPHDTEAALELAQQCEPRMKERSLLAIDKKRTMRHAMEIRHESFIDEGFIAL 181 FL+LLP + ++RH +E+R+E+F FI L Sbjct: 130 DFGAFLALLPEKQDGI-----------------------SLRHVVEVRNETFQVPEFIDL 166 Query: 182 LRKYNVALVVADTAGKWPYLEDVTADFMYLRLHGDKELYASGYTKPALERWARRIEAWSK 241 + KY VA+V AD +P L DVTADF+Y RL ++ + Y + + WA+R++ ++ Sbjct: 167 IAKYKVAVVCADHH-DYPMLPDVTADFVYCRLQKGEDDIKTCYPQTGISDWAKRLKTYAA 225 Query: 242 GGQPKDAQCASASQPKARKSRDIYCYFDNDIKVKAPFDARRL 283 GG P D + + + RD++ +F K+ AP A+ L Sbjct: 226 GGVPDDLPLTAPGRKVEKTQRDVFAFFITGGKINAPVGAQEL 267 >CC3109 Non COG Length = 275 Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 145/290 (50%), Gaps = 44/290 (15%) Query: 1 MAKIRIGISGWRYAPWRGGFYPEDLAQADELQFASRVLPSIELNGSFYALQRPQSYAAWY 60 M KIR GI GW + PWRG FYP+DL Q DEL++A+ L SIE+NG++Y+ +P S+ W Sbjct: 27 MGKIRTGIGGWTFEPWRGTFYPDDLKQKDELKYAASKLTSIEINGTYYSTFKPNSWMKWR 86 Query: 61 DATPPGFMFSIKGNRFITHIQRLRDIEGPLANVFASGVFNLKEKLGPFLWQFPPSFRYDA 120 D TP F+FS+K +RF T+ + L + L + G+ L KLGP WQF + ++D Sbjct: 87 DETPDDFVFSVKASRFCTNRRVLSENNDSLEKFLSQGLEELGPKLGPINWQFMATKKFDP 146 Query: 121 ELVEHFLSLLPHDTEAALELAQQCEPRMKERSLLAIDKKRTMRHAMEIRHESFIDEGFIA 180 E FL LLP + K +RHAME+R +F + F Sbjct: 147 ADFEGFLKLLPSE-----------------------QKGVRLRHAMEVRSPTFACQQFYD 183 Query: 181 LLRKYNVALV--VADTAGKWPYLEDVTADFMYLRLHGDKELYASGYTKPALERWARRIEA 238 L +Y VA+V V D A +WP ++ TADF Y RL +E +G T L+ + Sbjct: 184 LCAQYGVAIVYAVDDEAPEWPRIDQPTADFTYARLMCSREDEPTGMTSEELDGVVAQTHK 243 Query: 239 WSKGGQPKDAQCASASQPKARKSRDIYCYFDNDIKVKAPFDARRLIARLG 288 W++ G D++ YF KV+ P A LI +LG Sbjct: 244 WAERG-------------------DVFAYFIAGAKVRNPAAAMALIGKLG 274