BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0012.0015.p (192 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2526 [P] COG0605 Superoxide dismutase Rso Ralstonia solanacearum 311 7e-85 PA4366 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa 292 2e-79 STM1431 [P] COG0605 Superoxide dismutase Sty Salmonella typhimur... 287 9e-78 NMA1104 [P] COG0605 Superoxide dismutase NmA Neisseria meningiti... 285 3e-77 sodB [P] COG0605 Superoxide dismutase Eco Escherichia coli K12 283 2e-76 >RSc2526 [P] COG0605 Superoxide dismutase Rso Ralstonia solanacearum Length = 192 Score = 311 bits (796), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 157/192 (81%), Positives = 170/192 (88%) Query: 1 MAHTLPALPYELDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 MAHTLP LPY LDALAP ISKETLE+HYGKHHQTYVTNLNNLIPGTEFENLSLE+I+KKS Sbjct: 1 MAHTLPPLPYALDALAPHISKETLEFHYGKHHQTYVTNLNNLIPGTEFENLSLEDIVKKS 60 Query: 61 SGGVFNNAAQIWNHTFYWNGLTPKGAGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGG+FNNAAQ+WNHTFYWNGL P G GAP+GALADAINAKWGSFD FK EFTK + FG Sbjct: 61 SGGLFNNAAQVWNHTFYWNGLKPNGGGAPAGALADAINAKWGSFDKFKEEFTKVAIGTFG 120 Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKALLTMDVWEHAYYIDYRNARAKYAEAFWG 180 SGW WLVKKADG+LD+V+T+ A TPLTTD+K LLT DVWEHAYYIDYRNAR KY EAFW Sbjct: 121 SGWAWLVKKADGSLDLVSTSNAATPLTTDAKPLLTCDVWEHAYYIDYRNARPKYVEAFWS 180 Query: 181 IVNWDFAAKNFA 192 +VNWDF A NFA Sbjct: 181 LVNWDFVASNFA 192 >PA4366 [P] COG0605 Superoxide dismutase Pae Pseudomonas aeruginosa Length = 193 Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 139/192 (72%), Positives = 153/192 (79%) Query: 1 MAHTLPALPYELDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 MA LP LPYE +AL P IS ETLEYH+ KHH TYV NLNNLIPGTEFE SLEEI+K S Sbjct: 1 MAFELPPLPYEKNALEPHISAETLEYHHDKHHNTYVVNLNNLIPGTEFEGKSLEEIVKSS 60 Query: 61 SGGVFNNAAQIWNHTFYWNGLTPKGAGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGG+FNNAAQ+WNHTFYWN L+P G G P+GALADAINA +GSFD FK EFTK + FG Sbjct: 61 SGGIFNNAAQVWNHTFYWNCLSPNGGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFG 120 Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKALLTMDVWEHAYYIDYRNARAKYAEAFWG 180 SGW WLVKKADG+L + +T GAG PLT+ LLT DVWEHAYYIDYRN R KY EAFW Sbjct: 121 SGWGWLVKKADGSLALASTIGAGNPLTSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWN 180 Query: 181 IVNWDFAAKNFA 192 +VNWDF AKNFA Sbjct: 181 LVNWDFVAKNFA 192 >STM1431 [P] COG0605 Superoxide dismutase Sty Salmonella typhimurium LT2 Length = 193 Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 137/192 (71%), Positives = 152/192 (79%) Query: 1 MAHTLPALPYELDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 M+ LPALPY DALAP IS ETLEYHYGKHHQTYVTNLNNLI GT FE SLEEI++ S Sbjct: 1 MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIVRTS 60 Query: 61 SGGVFNNAAQIWNHTFYWNGLTPKGAGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 GG+FNNAAQ+WNHTFYWN L P G P+G LADAI A +GSF FKA+FT + NFG Sbjct: 61 EGGIFNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFG 120 Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKALLTMDVWEHAYYIDYRNARAKYAEAFWG 180 SGWTWLVK ADG L IV+T+ AGTPLTTD+ LLT+DVWEHAYYIDYRNAR Y E FW Sbjct: 121 SGWTWLVKSADGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFWA 180 Query: 181 IVNWDFAAKNFA 192 +VNW+F AKN A Sbjct: 181 LVNWEFVAKNLA 192 >NMA1104 [P] COG0605 Superoxide dismutase NmA Neisseria meningitidis Z2491 Length = 195 Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 135/192 (70%), Positives = 151/192 (78%) Query: 1 MAHTLPALPYELDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 M H LP LPYELDAL+P +SKETLE+HYGKHHQTY+TNLNN I GTEFENL LEEI+KKS Sbjct: 1 MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIKGTEFENLPLEEIVKKS 60 Query: 61 SGGVFNNAAQIWNHTFYWNGLTPKGAGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 SGGVFNNAAQ WNHTFYW G TPKG G PSG LA AI+AKWGSF+ F+ F+ FG Sbjct: 61 SGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWGSFEKFQEAFSACAAGTFG 120 Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKALLTMDVWEHAYYIDYRNARAKYAEAFWG 180 SGW WLVK G LD+V+T+ A TPLTT++ LLT DVWEHAYYIDYRN+R Y + FW Sbjct: 121 SGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWEHAYYIDYRNSRPNYLKGFWE 180 Query: 181 IVNWDFAAKNFA 192 IVNWD AK FA Sbjct: 181 IVNWDEVAKRFA 192 >sodB [P] COG0605 Superoxide dismutase Eco Escherichia coli K12 Length = 193 Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 135/192 (70%), Positives = 152/192 (79%) Query: 1 MAHTLPALPYELDALAPTISKETLEYHYGKHHQTYVTNLNNLIPGTEFENLSLEEIIKKS 60 M+ LPALPY DALAP IS ET+EYHYGKHHQTYVTNLNNLI GT FE SLEEII+ S Sbjct: 1 MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSS 60 Query: 61 SGGVFNNAAQIWNHTFYWNGLTPKGAGAPSGALADAINAKWGSFDAFKAEFTKQGLANFG 120 GGVFNNAAQ+WNHTFYWN L P G P+G +A+AI A +GSF FKA+FT + NFG Sbjct: 61 EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG 120 Query: 121 SGWTWLVKKADGTLDIVNTTGAGTPLTTDSKALLTMDVWEHAYYIDYRNARAKYAEAFWG 180 SGWTWLVK +DG L IV+T+ AGTPLTTD+ LLT+DVWEHAYYIDYRNAR Y E FW Sbjct: 121 SGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWA 180 Query: 181 IVNWDFAAKNFA 192 +VNW+F AKN A Sbjct: 181 LVNWEFVAKNLA 192