BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0082.p         (238 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Rv0390 [P] COG0607 Rhodanese-related sulfurtransferase Mtu Mycob...   102   5e-22
ML0276 [P] COG0607 Rhodanese-related sulfurtransferase Mle Mycob...   100   4e-21
RSc0296 [P] COG0607 Rhodanese-related sulfurtransferase Rso Rals...    84   4e-16
RSc1257 [P] COG0607 Rhodanese-related sulfurtransferase Rso Rals...    76   5e-14

>Rv0390 [P] COG0607 Rhodanese-related sulfurtransferase Mtu Mycobacterium
           tuberculosis H37Rv
          Length = 140

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 83/142 (58%), Gaps = 15/142 (10%)

Query: 108 LPYAGGVPPVLAWKLFSTR-QVLLVDVRSNEERKFVGHVPG-------SIHVPWATGTAL 159
           + YAG + P+ AW++ S   + +LVDVR   E +FVG VP         ++V WAT    
Sbjct: 1   MSYAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVG-VPDLSSLGREVVYVEWATSDG- 58

Query: 160 TRNPRFVRELESKIGGK----EVVALLLCRSGKRSALAAEAATKAGLTCIFNVLEGFEGE 215
           T N  F+ EL  +I       E   + LCRSG RS  AAE AT+AG+T  +NVL+GFEG 
Sbjct: 59  THNDNFLAELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGH 118

Query: 216 IDAQQQRGKADGWRFHGLPWIQ 237
           +DA+  RG A GWR  GLPW Q
Sbjct: 119 LDAEGHRG-ATGWRAVGLPWRQ 139


>ML0276 [P] COG0607 Rhodanese-related sulfurtransferase Mle Mycobacterium
           leprae
          Length = 147

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 20/144 (13%)

Query: 109 PYAGGVPPVLAWKLFSTR-QVLLVDVRSNEERKFVGHVPGS-------IHVPWATGTALT 160
           PYAG + P+ AWK+ S     +LVDVR++ E +FVG VP +       +++ W T   L 
Sbjct: 8   PYAGDITPLQAWKMLSDNPHTVLVDVRTDAEWRFVG-VPDTSSLGREVVYIEWNTSDGLP 66

Query: 161 RNPRFVRELESKI-------GGKEVVALLLCRSGKRSALAAEAATKAGLTCIFNVLEGFE 213
            N  F+ EL+ +I       G + VV   LCRSG RS  AA+ AT AG++  +N+L+GFE
Sbjct: 67  -NVNFLAELQERIPPANAERGERPVV--FLCRSGHRSMGAAQVATDAGISPSYNILDGFE 123

Query: 214 GEIDAQQQRGKADGWRFHGLPWIQ 237
           G ++A+  RG+  GWR  GLPW Q
Sbjct: 124 GHLNAEGHRGET-GWRAVGLPWKQ 146


>RSc0296 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 130

 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 125 TRQVLLVDVRSNEERKFVGHVPGSIHVPWATGTALTRNPRFVRELESKIG-GKEVVALLL 183
           T   L +D RS  E  FVGH  GS H  W  G     NP FV  +    G G +   +L+
Sbjct: 16  TPAALFIDCRSEMEHLFVGHPAGSHHAAWNDGPHWEINPEFVPTVRKLSGHGIDRPIVLI 75

Query: 184 CRSGKRSALAAEAATKAGLTCIFNVLEGFEGEIDAQQQRGKADGWRFHGLPWIQ 237
           CRSG RSA AA+A   AG   ++ V  GFEG++DA + R   +GWR  GLPW Q
Sbjct: 76  CRSGNRSAAAAQALEAAGFREVYVVRHGFEGDLDATRHRNTLNGWRHAGLPWEQ 129


>RSc1257 [P] COG0607 Rhodanese-related sulfurtransferase Rso Ralstonia
           solanacearum
          Length = 158

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/136 (43%), Positives = 72/136 (52%), Gaps = 6/136 (4%)

Query: 105 SSSLPYAGGVPPVLAWKLFSTR-QVLLVDVRSNEERKFVG--HVPGS--IHVPWATGTAL 159
           +  LPY G + P     L +   Q  LVDVR+  E  +VG   VP    +HV W      
Sbjct: 21  AGQLPYFGALTPEETAALLAADPQARLVDVRTRAELDWVGAPQVPAGQFVHVEWNRYPGG 80

Query: 160 TRNPRFVRELESKIGGKEVVALLLCRSGKRSALAAEAATKAGLTCIFNVLEGFEGEIDAQ 219
            RNP F+ ELE+ +  K+   L LCRS  RS  AA AAT+AG     +VLEGFEG  DA 
Sbjct: 81  VRNPDFLAELEAAVP-KDAPVLFLCRSAARSKHAAAAATQAGYALAMDVLEGFEGAKDAA 139

Query: 220 QQRGKADGWRFHGLPW 235
             R   +GW F GLPW
Sbjct: 140 GHRKTVEGWCFRGLPW 155