BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0011.0066.p         (54 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEII0483 [G] COG1175 ABC-type sugar transport systems, permease...    68   6e-12

>BMEII0483 [G] COG1175 ABC-type sugar transport systems, permease components
           Bme Brucella melitensis
          Length = 205

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/54 (75%), Positives = 48/54 (88%)

Query: 1   VISIAAYEAAFENYDYSMASAVAMIMGAVQLGVVVIVLGARNLFYRGPVTGGKG 54
           VISIAAY+AAFE YDYSMA+A+AMIM AVQL +VV+VLG R+LFYRG  +GGKG
Sbjct: 152 VISIAAYQAAFEQYDYSMAAAIAMIMAAVQLAIVVLVLGIRSLFYRGATSGGKG 205