BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0055.p (275 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1341 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 295 5e-80 PA3442 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp... 275 6e-74 YPO3627 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans... 262 7e-70 ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transpor... 253 3e-67 ZycbE [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transpo... 253 3e-67 >RSc1341 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Rso Ralstonia solanacearum Length = 284 Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 159/249 (63%), Positives = 177/249 (71%), Gaps = 10/249 (4%) Query: 19 MQNNPVETTQVKNAAEAQSGKQSRGVRVAIDGLSKSYAGREVLKAVALDVKPGEFVAIVG 78 MQ+N E ++ A RG + I K Y REVL + L++ PGEFVAIVG Sbjct: 1 MQSNATEHAALERVA-------PRGTALRIAHAVKRYGEREVLYGIDLEIAPGEFVAIVG 53 Query: 79 RSGCGKSTLLRLIAKLETATHGEVAFAKDDDGRQAGFEPETRIMFQDSRLLPWKRVLNNV 138 RSGCGKSTLLRLIA LE G + D G + R+MFQD+RLLPWKRVL+NV Sbjct: 54 RSGCGKSTLLRLIAGLEGIDGGSL---HRDGAAGGGLHDDARVMFQDARLLPWKRVLDNV 110 Query: 139 ALGLPKAALPSASQALRQVGLEERAGEWPAVLSGGQRQRVALARALVHDPELLLLDEPLG 198 ALGLP+ A++ L QVGL ERAGEWPA LSGGQRQRVALARALVH P LLLLDEPLG Sbjct: 111 ALGLPRTHRAQAAEVLAQVGLAERAGEWPARLSGGQRQRVALARALVHRPRLLLLDEPLG 170 Query: 199 ALDALTRIEMQQLIESLWQKRGFTAVLVTHDVQEAIALADRVVLIEDGNITLDQIIDLPR 258 ALDALTRI+MQ LIE LWQ+ GFTAVLVTHDV EA+ALADRVVLIEDG I LD IDLPR Sbjct: 171 ALDALTRIDMQNLIEGLWQRLGFTAVLVTHDVAEAVALADRVVLIEDGRIALDARIDLPR 230 Query: 259 PRARGFFVF 267 PR RG F Sbjct: 231 PRHRGAPAF 239 >PA3442 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Pae Pseudomonas aeruginosa Length = 274 Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 144/227 (63%), Positives = 176/227 (77%), Gaps = 7/227 (3%) Query: 39 KQSRGVRVAIDGLSKSYAGREVLKAVALDVKPGEFVAIVGRSGCGKSTLLRLIAKLETAT 98 + RG+ +A+ G+++ + REVLK + L V G+FVAIVGRSGCGKSTLLRL+A L+ + Sbjct: 14 RLKRGIPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQPS 73 Query: 99 HGEV--AFAKDDDGRQAGFEPETRIMFQDSRLLPWKRVLNNVALGLPKAALPSASQALRQ 156 GE+ A + R+ +TR+MFQDSRLLPWKRV++NV LGL A QALR Sbjct: 74 RGELLAGSAALAEARE-----DTRLMFQDSRLLPWKRVIDNVGLGLRGDWRAKALQALRA 128 Query: 157 VGLEERAGEWPAVLSGGQRQRVALARALVHDPELLLLDEPLGALDALTRIEMQQLIESLW 216 VGL ERA EWPA LSGGQ+QRVALARAL+H+P LLLLDEPLGALDALTRIEMQQLIE LW Sbjct: 129 VGLAERANEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEMQQLIEGLW 188 Query: 217 QKRGFTAVLVTHDVQEAIALADRVVLIEDGNITLDQIIDLPRPRARG 263 ++ GFT +LVTHDV EA+A+ADRV+LIEDG I LD ++LPRPR+RG Sbjct: 189 REHGFTVLLVTHDVSEAVAVADRVILIEDGEIGLDLPVELPRPRSRG 235 >YPO3627 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Ype Yersinia pestis Length = 271 Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 138/229 (60%), Positives = 165/229 (72%), Gaps = 17/229 (7%) Query: 42 RGVRVAIDGLSKSYAGREVLKAVALDVKPGEFVAIVGRSGCGKSTLLRLIAKLETATHGE 101 +G + ++ + K Y R VL + L + G+FVA+VGRSGCGKSTLLRL+A LE A+ G Sbjct: 9 QGTPITLESIGKRYGNRTVLDNLQLRITAGQFVAVVGRSGCGKSTLLRLLAGLEAASDGT 68 Query: 102 V-------AFAKDDDGRQAGFEPETRIMFQDSRLLPWKRVLNNVALGLPKAALPSASQAL 154 + + AKD ETR+MFQ++RLLPWK+V++NV LGL A Q L Sbjct: 69 LLSGNALLSHAKD----------ETRLMFQEARLLPWKKVIDNVGLGLRGHWRDEALQVL 118 Query: 155 RQVGLEERAGEWPAVLSGGQRQRVALARALVHDPELLLLDEPLGALDALTRIEMQQLIES 214 VGL +RA EWPA LSGGQ+QRVALARAL+H P LLLLDEPLGALDALTRIEMQ LIE Sbjct: 119 DTVGLADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEPLGALDALTRIEMQGLIER 178 Query: 215 LWQKRGFTAVLVTHDVQEAIALADRVVLIEDGNITLDQIIDLPRPRARG 263 LWQ+ GFT +LVTHDV EAIALADRV+LIE+G I LD IDLPRPR +G Sbjct: 179 LWQQHGFTVLLVTHDVSEAIALADRVLLIEEGRIGLDLAIDLPRPRRKG 227 >ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Eco Escherichia coli K12 Length = 255 Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 135/228 (59%), Positives = 168/228 (73%), Gaps = 3/228 (1%) Query: 36 QSGKQSRGVRVAIDGLSKSYAGREVLKAVALDVKPGEFVAIVGRSGCGKSTLLRLIAKLE 95 + + ++G + ++ +SK YA VL + L + G+FVA+VGRSG GKSTLLRL+A LE Sbjct: 2 NTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLE 61 Query: 96 TATHGEVAFAKDDDGRQAGFEPETRIMFQDSRLLPWKRVLNNVALGLPKAALPSASQALR 155 T T G+V A + +TR+MFQD+RLLPWK V++NV LGL +A +AL Sbjct: 62 TPTAGDVLAGTTP---LAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALA 118 Query: 156 QVGLEERAGEWPAVLSGGQRQRVALARALVHDPELLLLDEPLGALDALTRIEMQQLIESL 215 VGLE RAGEWPA LSGGQ+QRVALARAL+H P LLLLDEPLGALDALTR+EMQ LI SL Sbjct: 119 AVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSL 178 Query: 216 WQKRGFTAVLVTHDVQEAIALADRVVLIEDGNITLDQIIDLPRPRARG 263 WQ+ GFT +LVTHDV EA+A+ADRV+LIE+G I LD +D+PRPR G Sbjct: 179 WQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLG 226 >ZycbE [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component EcZ Escherichia coli O157:H7 EDL933 Length = 255 Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 135/228 (59%), Positives = 168/228 (73%), Gaps = 3/228 (1%) Query: 36 QSGKQSRGVRVAIDGLSKSYAGREVLKAVALDVKPGEFVAIVGRSGCGKSTLLRLIAKLE 95 + + ++G + ++ +SK YA VL + L + G+FVA+VGRSG GKSTLLRL+A LE Sbjct: 2 NTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLE 61 Query: 96 TATHGEVAFAKDDDGRQAGFEPETRIMFQDSRLLPWKRVLNNVALGLPKAALPSASQALR 155 T T G+V A + +TR+MFQD+RLLPWK V++NV LGL +A +AL Sbjct: 62 TPTAGDVLAGTTP---LAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALA 118 Query: 156 QVGLEERAGEWPAVLSGGQRQRVALARALVHDPELLLLDEPLGALDALTRIEMQQLIESL 215 VGLE RAGEWPA LSGGQ+QRVALARAL+H P LLLLDEPLGALDALTR+EMQ LI SL Sbjct: 119 AVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSL 178 Query: 216 WQKRGFTAVLVTHDVQEAIALADRVVLIEDGNITLDQIIDLPRPRARG 263 WQ+ GFT +LVTHDV EA+A+ADRV+LIE+G I LD +D+PRPR G Sbjct: 179 WQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLG 226