BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0011.0054.p (280 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 340 2e-93 YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 332 8e-91 RSc1340 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 321 1e-87 ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpor... 319 4e-87 ZycbM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transpo... 315 8e-86 >PA3443 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 262 Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 167/249 (67%), Positives = 204/249 (81%) Query: 32 ATQLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGR 91 A +L WALP+ L+ VWQ A + GWLSSRILP P AVL A W L SGE+W HL +S R Sbjct: 8 AERLAPWALPLVLLAVWQAAVEFGWLSSRILPAPSAVLEAGWALLRSGEIWQHLAISGWR 67 Query: 92 AASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKL 151 AA GF +GG +GL+LG +TG + E LD+++QM+RN+P LALIPL+ILWFGIDE++K+ Sbjct: 68 AAIGFLIGGAIGLVLGFVTGLSKWGERFLDSSVQMIRNVPHLALIPLVILWFGIDESAKI 127 Query: 152 FLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFA 211 FLV++G FPIYLNT+HGIR +D GL+EMA+SYGLSG+ L+R VILPGALPSILVGVRFA Sbjct: 128 FLVALGTLFPIYLNTYHGIRGIDPGLLEMARSYGLSGFALFRQVILPGALPSILVGVRFA 187 Query: 212 LGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKF 271 LG +W+ LIVAETISA +GIGY+ MNAREFLQTDVV++ ILLYA+LGKLAD+ AR LE+ Sbjct: 188 LGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAILLYAVLGKLADLAARGLERV 247 Query: 272 WLRWHPGYQ 280 WLRWHP YQ Sbjct: 248 WLRWHPAYQ 256 >YPO3626 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Ype Yersinia pestis Length = 265 Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 161/247 (65%), Positives = 205/247 (82%) Query: 34 QLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAA 93 +L W LPV L+V WQ+A + GWLS+RILP P AV+ A W L+ SGELW HL +S+ RA Sbjct: 12 RLAPWILPVALVVGWQVAVEAGWLSNRILPAPSAVVTAFWALTKSGELWQHLTISSWRAL 71 Query: 94 SGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKLFL 153 GF++GG +GL+LG++TG R E LL++++QM+RN+P LALIPL+ILWFGIDE++K+FL Sbjct: 72 IGFSIGGSIGLVLGVITGLSRWGERLLNSSVQMIRNVPHLALIPLVILWFGIDESAKIFL 131 Query: 154 VSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFALG 213 V++G FPIYLNT+HGI+++D GL+EMA+SYGLSG+ L V+LPGALPSI+VGVRFALG Sbjct: 132 VALGTLFPIYLNTYHGIKNIDSGLLEMARSYGLSGFRLLTQVVLPGALPSIMVGVRFALG 191 Query: 214 LVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKFWL 273 +W+ LIVAETISA +GIGY+ MNAREFLQTDVV+V I+LYALLGKLAD A+ LE+ WL Sbjct: 192 FMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADGSAQLLERVWL 251 Query: 274 RWHPGYQ 280 RWHP YQ Sbjct: 252 RWHPAYQ 258 >RSc1340 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Rso Ralstonia solanacearum Length = 264 Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 188/247 (76%), Positives = 215/247 (87%) Query: 34 QLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAA 93 +L W +P+ L+ WQ AAQ GWLS+RILP P V R+A L+ SGELW H+ VST RA Sbjct: 15 RLTPWLVPLALLAAWQAAAQWGWLSNRILPAPLDVARSAIELARSGELWKHVAVSTWRAL 74 Query: 94 SGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKLFL 153 GFA+GG LGL LGLLTGTFR AE LLDTTLQM+RNIP LALIPL+ILWFGIDE++KLFL Sbjct: 75 LGFAIGGSLGLALGLLTGTFRTAETLLDTTLQMIRNIPVLALIPLVILWFGIDESAKLFL 134 Query: 154 VSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFALG 213 VS+GVFFPIYLNT+HGIR+VD L+EMA+SYGLS LYR+VILPGALP ILVGVRF+LG Sbjct: 135 VSLGVFFPIYLNTYHGIRAVDPALVEMARSYGLSRARLYREVILPGALPQILVGVRFSLG 194 Query: 214 LVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKFWL 273 L+WV LIVAET+SAQAGIGYMTMNAREFLQTDVVL+GILLYALLGKLAD+L+R+LE+FWL Sbjct: 195 LMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLYALLGKLADLLSRALERFWL 254 Query: 274 RWHPGYQ 280 RWHPGYQ Sbjct: 255 RWHPGYQ 261 >ssuC [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Eco Escherichia coli K12 Length = 278 Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 169/269 (62%), Positives = 215/269 (79%) Query: 12 TPRKIAAAKSSGSGSSNGFGATQLLSWALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRA 71 +P K AK + ++ W LPVG++ VWQ+A+ +GWLS+RILP P V+ A Sbjct: 4 SPVKSRKAKEEIMATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTA 63 Query: 72 AWNLSVSGELWTHLGVSTGRAASGFAVGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIP 131 W LS SGELW HL +S+ RA GF++GG LGL+LGL++G R E LLDT++QM+RN+P Sbjct: 64 FWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVP 123 Query: 132 ALALIPLMILWFGIDETSKLFLVSVGVFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPL 191 LALIPL+ILWFGIDE++K+FLV++G FPIY+NT+HGIR++D+GL+EMA+SYGLSG PL Sbjct: 124 HLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPL 183 Query: 192 YRDVILPGALPSILVGVRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGI 251 + VILPGALPSI+VGVRFALGL+W+ LIVAETISA +GIGY+ MNAREFLQTDVV+V I Sbjct: 184 FIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAI 243 Query: 252 LLYALLGKLADVLARSLEKFWLRWHPGYQ 280 +LYALLGKLADV A+ LE+ WLRW+P Y Sbjct: 244 ILYALLGKLADVSAQLLERLWLRWNPAYH 272 >ZycbM [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 263 Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 164/243 (67%), Positives = 206/243 (84%) Query: 38 WALPVGLIVVWQIAAQLGWLSSRILPEPWAVLRAAWNLSVSGELWTHLGVSTGRAASGFA 97 W LPVG++ VWQ+A+ +GWLS+RILP P V+ A W LS SGELW HL +S+ RA F+ Sbjct: 15 WFLPVGIVTVWQLASSVGWLSTRILPSPEGVVMAFWTLSASGELWQHLAISSWRALIVFS 74 Query: 98 VGGGLGLLLGLLTGTFRQAEVLLDTTLQMVRNIPALALIPLMILWFGIDETSKLFLVSVG 157 +GG LGL+LGL++G R E LLDT++QM+RN+P LALIPL+ILWFGIDE++K+FLV++G Sbjct: 75 IGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALG 134 Query: 158 VFFPIYLNTFHGIRSVDKGLIEMAKSYGLSGWPLYRDVILPGALPSILVGVRFALGLVWV 217 FPIY+NT+HGIR++D+GL+EMA+SYGLSG PL+ VILPGALPSI+VGVRFALGL+W+ Sbjct: 135 TLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWL 194 Query: 218 LLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYALLGKLADVLARSLEKFWLRWHP 277 LIVAETISA +GIGY+ MNAREFLQTDVV+V I+LYALLGKLADV A+ LE+ WLRW+P Sbjct: 195 TLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNP 254 Query: 278 GYQ 280 Y Sbjct: 255 AYH 257